RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 RHEBQ15382 184 aa7.43□□□□□ -1.22
GGA3-209ENST00000580646 PYY3Q5JQD4 70 aa7.43□□□□□ -1.22
GGA3-209ENST00000580646 FAM90A2PQ658T7 463 aa7.43□□□□□ -1.22
GGA3-209ENST00000580646 S100A7AQ86SG5 101 aa7.43□□□□□ -1.22
GGA3-209ENST00000580646 TMEM61Q8N0U2 210 aa7.43□□□□□ -1.22
GGA3-209ENST00000580646 SPAG8Q99932 426 aaPredicted RBP7.43□□□□□ -1.22
GGA3-209ENST00000580646 PARD6GQ9BYG4 376 aaPredicted RBP7.43□□□□□ -1.22
GGA3-209ENST00000580646 RNF24Q9Y225 148 aa7.43□□□□□ -1.22
GGA3-209ENST00000580646 DYNC2H1Q8NCM8 4307 aaKnown RBP7.42□□□□□ -1.22
GGA3-209ENST00000580646 TRAV2A0A0B4J234 112 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 UBE2L5PA0A1B0GUS4 154 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 ZNF785A8K8V0 405 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 ZNF207O43670 478 aaKnown RBP7.42□□□□□ -1.22
GGA3-209ENST00000580646 LINC00869P0C866 280 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 ADCYAP1P18509 176 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 RPL29P47914 159 aaKnown RBP7.42□□□□□ -1.22
GGA3-209ENST00000580646 CAMLGP49069 296 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 LYZP61626 148 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 PRR20EP86478 221 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 PRR20CP86479 221 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 PRR20DP86480 221 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 PRR20BP86481 221 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 PRR20AP86496 221 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 C1orf194Q5T5A4 169 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 C16orf54Q6UWD8 224 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 TMEM182Q6ZP80 229 aaPredicted RBP7.42□□□□□ -1.22
GGA3-209ENST00000580646 RBPMS2Q6ZRY4 209 aaKnown RBP7.42□□□□□ -1.22
GGA3-209ENST00000580646 SBSPONQ8IVN8 264 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 Q8N1Y9 231 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 RNF141Q8WVD5 230 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 SAT2Q96F10 170 aaPredicted RBP7.42□□□□□ -1.22
GGA3-209ENST00000580646 RNF2Q99496 336 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 MGST2Q99735 147 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 ATP5SQ99766 215 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 FAM110AQ9BQ89 295 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 GGTLC1Q9BX51 225 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 KCNIP2Q9NS61 270 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 FBXL17Q9UF56 701 aa7.42□□□□□ -1.22
GGA3-209ENST00000580646 HUWE1Q7Z6Z7 4374 aaKnown RBP7.41□□□□□ -1.22
GGA3-209ENST00000580646 IZUMO1RA6ND01 250 aa7.41□□□□□ -1.22
GGA3-209ENST00000580646 HELTA6NFD8 242 aa7.41□□□□□ -1.22
GGA3-209ENST00000580646 PPP1R2P9O14990 202 aa7.41□□□□□ -1.22
GGA3-209ENST00000580646 APOHP02749 345 aaPredicted RBP7.41□□□□□ -1.22
GGA3-209ENST00000580646 FRMD6-AS1P0C7T7 363 aa7.41□□□□□ -1.22
GGA3-209ENST00000580646 TPT1P13693 172 aaKnown RBP7.41□□□□□ -1.22
GGA3-209ENST00000580646 ZNF25P17030 456 aaPredicted RBP7.41□□□□□ -1.22
GGA3-209ENST00000580646 CDKN1BP46527 198 aa7.41□□□□□ -1.22
GGA3-209ENST00000580646 MAJINQ3KP22 176 aa7.41□□□□□ -1.22
GGA3-209ENST00000580646 INO80EQ8NBZ0 244 aaPredicted RBP7.41□□□□□ -1.22
GGA3-209ENST00000580646 GLMPQ8WWB7 406 aa7.41□□□□□ -1.22
GGA3-209ENST00000580646 PBDC1Q9BVG4 233 aa7.41□□□□□ -1.22
GGA3-209ENST00000580646 NPCDR1Q9BY65 106 aa7.41□□□□□ -1.22
GGA3-209ENST00000580646 WDR61Q9GZS3 305 aaKnown RBP7.41□□□□□ -1.22
GGA3-209ENST00000580646 TNFSF18Q9UNG2 199 aa7.41□□□□□ -1.22
GGA3-209ENST00000580646 TENM3Q9P273 2699 aa7.4□□□□□ -1.22
GGA3-209ENST00000580646 RNF222A6NCQ9 220 aa7.4□□□□□ -1.22
GGA3-209ENST00000580646 CXorf65A6NEN9 183 aa7.4□□□□□ -1.22
GGA3-209ENST00000580646 OR4C46A6NHA9 309 aa7.4□□□□□ -1.22
GGA3-209ENST00000580646 A8MZ25 164 aa7.4□□□□□ -1.22
GGA3-209ENST00000580646 HYPMO75409 117 aa7.4□□□□□ -1.22
GGA3-209ENST00000580646 GATA2P23769 480 aaPredicted RBP7.4□□□□□ -1.22
GGA3-209ENST00000580646 PAFAH1B2P68402 229 aa7.4□□□□□ -1.22
GGA3-209ENST00000580646 ZNF266Q14584 549 aa7.4□□□□□ -1.22
GGA3-209ENST00000580646 CLINT1Q14677 625 aa7.4□□□□□ -1.22
GGA3-209ENST00000580646 Q6ZRG5 221 aa7.4□□□□□ -1.22
GGA3-209ENST00000580646 TCF24Q7RTU0 167 aa7.4□□□□□ -1.22
GGA3-209ENST00000580646 GTSCR1Q86UQ5 136 aa7.4□□□□□ -1.22
GGA3-209ENST00000580646 STPG3Q8N7X2 389 aa7.4□□□□□ -1.22
GGA3-209ENST00000580646 GPR82Q96P67 336 aa7.4□□□□□ -1.22
GGA3-209ENST00000580646 SEPSECSQ9HD40 501 aaKnown RBP7.4□□□□□ -1.22
GGA3-209ENST00000580646 HIGD1AQ9Y241 93 aa7.4□□□□□ -1.22
GGA3-209ENST00000580646 HYDINQ4G0P3 5121 aa7.39□□□□□ -1.23
GGA3-209ENST00000580646 IGHV3-49A0A0A0MS15 119 aa7.39□□□□□ -1.23
GGA3-209ENST00000580646 C17orf112F2Z3M2 114 aa7.39□□□□□ -1.23
GGA3-209ENST00000580646 H3BRN7 92 aa7.39□□□□□ -1.23
GGA3-209ENST00000580646 IFNA5P01569 189 aa7.39□□□□□ -1.23
GGA3-209ENST00000580646 IGHV4-30-4P0DP06 118 aa7.39□□□□□ -1.23
GGA3-209ENST00000580646 ORM2P19652 201 aa7.39□□□□□ -1.23
GGA3-209ENST00000580646 CMC4P56277 68 aaPredicted RBP7.39□□□□□ -1.23
GGA3-209ENST00000580646 SIGLEC15Q6ZMC9 328 aa7.39□□□□□ -1.23
GGA3-209ENST00000580646 OR1L4Q8NGR5 311 aa7.39□□□□□ -1.23
GGA3-209ENST00000580646 OR1B1Q8NGR6 318 aa7.39□□□□□ -1.23
GGA3-209ENST00000580646 ZNF471Q9BX82 626 aaPredicted RBP7.39□□□□□ -1.23
GGA3-209ENST00000580646 SLC25A39Q9BZJ4 359 aaPredicted RBP7.39□□□□□ -1.23
GGA3-209ENST00000580646 SLC39A9Q9NUM3 307 aa7.39□□□□□ -1.23
GGA3-209ENST00000580646 C19orf73Q9NVV2 129 aa7.39□□□□□ -1.23
GGA3-209ENST00000580646 IGHV3OR16-13A0A075B7E8 117 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 IGHV3-74A0A0B4J1X5 117 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 TAAR5O14804 337 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 AKR1C8PQ5T2L2 129 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 SAMD13Q5VXD3 122 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 PATE2Q6UY27 113 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 ZNF709Q8N972 641 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 OR10D4PQ8NGN7 298 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 SCGB1C1Q8TD33 95 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 GATAD1Q8WUU5 269 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 TMEM37Q8WXS4 190 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 RCHY1Q96PM5 261 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 SHANK2-AS3Q9BTD1 123 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 TMEM208Q9BTX3 173 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms