RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 BAXQ07812 192 aa11.15□□□□□ -0.62
SF3B3-215ENST00000577085 RAB32Q13637 225 aa11.15□□□□□ -0.62
SF3B3-215ENST00000577085 SPINK13Q1W4C9 94 aa11.15□□□□□ -0.62
SF3B3-215ENST00000577085 RRN3P1Q2M238 152 aa11.15□□□□□ -0.62
SF3B3-215ENST00000577085 C12orf74Q32Q52 190 aa11.15□□□□□ -0.62
SF3B3-215ENST00000577085 OR1L4Q8NGR5 311 aa11.15□□□□□ -0.62
SF3B3-215ENST00000577085 IGF2BP2-AS1Q96M15 143 aa11.15□□□□□ -0.62
SF3B3-215ENST00000577085 C17orf77Q96MU5 243 aa11.15□□□□□ -0.62
SF3B3-215ENST00000577085 PTTG2Q9NZH5 202 aa11.15□□□□□ -0.62
SF3B3-215ENST00000577085 LOC102723971A0A1B0GUV8 181 aa11.14□□□□□ -0.63
SF3B3-215ENST00000577085 RLN2P04090 185 aa11.14□□□□□ -0.63
SF3B3-215ENST00000577085 CXCL2P19875 107 aa11.14□□□□□ -0.63
SF3B3-215ENST00000577085 CXCL3P19876 107 aa11.14□□□□□ -0.63
SF3B3-215ENST00000577085 PSG3Q16557 428 aa11.14□□□□□ -0.63
SF3B3-215ENST00000577085 LCN15Q6UWW0 184 aa11.14□□□□□ -0.63
SF3B3-215ENST00000577085 RPP25LQ8N5L8 163 aaKnown RBP11.14□□□□□ -0.63
SF3B3-215ENST00000577085 OR11H7Q8NGC8 314 aa11.14□□□□□ -0.63
SF3B3-215ENST00000577085 PFDN5Q99471 154 aa11.14□□□□□ -0.63
SF3B3-215ENST00000577085 SLC50A1Q9BRV3 221 aa11.14□□□□□ -0.63
SF3B3-215ENST00000577085 RNF126Q9BV68 326 aa11.14□□□□□ -0.63
SF3B3-215ENST00000577085 DNAJC4Q9NNZ3 241 aa11.14□□□□□ -0.63
SF3B3-215ENST00000577085 APLNQ9ULZ1 77 aa11.14□□□□□ -0.63
SF3B3-215ENST00000577085 M0R2Z0 102 aa11.13□□□□□ -0.63
SF3B3-215ENST00000577085 DEFA1P59665 94 aa11.13□□□□□ -0.63
SF3B3-215ENST00000577085 DEFA3P59666 94 aa11.13□□□□□ -0.63
SF3B3-215ENST00000577085 TMEM252Q8N6L7 170 aa11.13□□□□□ -0.63
SF3B3-215ENST00000577085 NDUFAF3Q9BU61 184 aa11.13□□□□□ -0.63
SF3B3-215ENST00000577085 WDR83OSQ9Y284 106 aa11.13□□□□□ -0.63
SF3B3-215ENST00000577085 IGSF23A1L1A6 192 aa11.12□□□□□ -0.63
SF3B3-215ENST00000577085 A6NHS1 94 aa11.12□□□□□ -0.63
SF3B3-215ENST00000577085 BOLA2-SMG1P6H3BVE0 249 aa11.12□□□□□ -0.63
SF3B3-215ENST00000577085 PRAF2O60831 178 aa11.12□□□□□ -0.63
SF3B3-215ENST00000577085 SNRPCP09234 159 aaKnown RBP11.12□□□□□ -0.63
SF3B3-215ENST00000577085 FGF7P21781 194 aa11.12□□□□□ -0.63
SF3B3-215ENST00000577085 B2MP61769 119 aa11.12□□□□□ -0.63
SF3B3-215ENST00000577085 ATP6V1FQ16864 119 aa11.12□□□□□ -0.63
SF3B3-215ENST00000577085 FAM222AQ5U5X8 452 aa11.12□□□□□ -0.63
SF3B3-215ENST00000577085 MIC13Q5XKP0 118 aa11.12□□□□□ -0.63
SF3B3-215ENST00000577085 AMTNQ6UX39 209 aa11.12□□□□□ -0.63
SF3B3-215ENST00000577085 C1orf158Q8N1D5 194 aa11.12□□□□□ -0.63
SF3B3-215ENST00000577085 OR8A1Q8NGG7 326 aa11.12□□□□□ -0.63
SF3B3-215ENST00000577085 TMEM37Q8WXS4 190 aa11.12□□□□□ -0.63
SF3B3-215ENST00000577085 RPUSD4Q96CM3 377 aaKnown RBP11.12□□□□□ -0.63
SF3B3-215ENST00000577085 NIPSNAP3BQ9BS92 247 aa11.12□□□□□ -0.63
SF3B3-215ENST00000577085 DKK2Q9UBU2 259 aa11.12□□□□□ -0.63
SF3B3-215ENST00000577085 YTHDF2Q9Y5A9 579 aaKnown RBP11.12□□□□□ -0.63
SF3B3-215ENST00000577085 A8MTW9 85 aa11.11□□□□□ -0.63
SF3B3-215ENST00000577085 HTN3P15516 51 aa11.11□□□□□ -0.63
SF3B3-215ENST00000577085 OPCMLQ14982 345 aa11.11□□□□□ -0.63
SF3B3-215ENST00000577085 VWC2Q2TAL6 325 aa11.11□□□□□ -0.63
SF3B3-215ENST00000577085 LRRC37A5PQ49AS3 106 aa11.11□□□□□ -0.63
SF3B3-215ENST00000577085 BAP18Q8IXM2 172 aa11.11□□□□□ -0.63
SF3B3-215ENST00000577085 SLC25A31Q9H0C2 315 aa11.11□□□□□ -0.63
SF3B3-215ENST00000577085 C11orf1Q9H5F2 150 aa11.11□□□□□ -0.63
SF3B3-215ENST00000577085 ZNF331Q9NQX6 463 aaPredicted RBP11.11□□□□□ -0.63
SF3B3-215ENST00000577085 SLC39A9Q9NUM3 307 aa11.11□□□□□ -0.63
SF3B3-215ENST00000577085 PXMP4Q9Y6I8 212 aa11.11□□□□□ -0.63
SF3B3-215ENST00000577085 EPPK1P58107 5090 aaKnown RBP11.1□□□□□ -0.63
SF3B3-215ENST00000577085 TRAV12-2A0A075B6T6 113 aa11.1□□□□□ -0.63
SF3B3-215ENST00000577085 INMT-MINDY4F8WBC2 141 aa11.1□□□□□ -0.63
SF3B3-215ENST00000577085 H3BTX0 84 aa11.1□□□□□ -0.63
SF3B3-215ENST00000577085 MPDU1O75352 247 aa11.1□□□□□ -0.63
SF3B3-215ENST00000577085 SIX6O95475 246 aa11.1□□□□□ -0.63
SF3B3-215ENST00000577085 RPL29P47914 159 aaKnown RBP11.1□□□□□ -0.63
SF3B3-215ENST00000577085 CYCSP99999 105 aaKnown RBP11.1□□□□□ -0.63
SF3B3-215ENST00000577085 IL15RAQ13261 267 aa11.1□□□□□ -0.63
SF3B3-215ENST00000577085 GUK1Q16774 197 aa11.1□□□□□ -0.63
SF3B3-215ENST00000577085 OR10J6PQ8NGY7 276 aa11.1□□□□□ -0.63
SF3B3-215ENST00000577085 LINC01587Q99440 93 aa11.1□□□□□ -0.63
SF3B3-215ENST00000577085 NMES1Q9C002 83 aa11.1□□□□□ -0.63
SF3B3-215ENST00000577085 E5RGE8 158 aa11.09□□□□□ -0.63
SF3B3-215ENST00000577085 MRPS12O15235 138 aaKnown RBP11.09□□□□□ -0.63
SF3B3-215ENST00000577085 SSNA1O43805 119 aa11.09□□□□□ -0.63
SF3B3-215ENST00000577085 DAD1P61803 113 aa11.09□□□□□ -0.63
SF3B3-215ENST00000577085 PRR20EP86478 221 aa11.09□□□□□ -0.63
SF3B3-215ENST00000577085 PRR20CP86479 221 aa11.09□□□□□ -0.63
SF3B3-215ENST00000577085 PRR20DP86480 221 aa11.09□□□□□ -0.63
SF3B3-215ENST00000577085 PRR20BP86481 221 aa11.09□□□□□ -0.63
SF3B3-215ENST00000577085 PRR20AP86496 221 aa11.09□□□□□ -0.63
SF3B3-215ENST00000577085 MORN5Q5VZ52 161 aa11.09□□□□□ -0.63
SF3B3-215ENST00000577085 TMEM256Q8N2U0 113 aa11.09□□□□□ -0.63
SF3B3-215ENST00000577085 TRAV5A0A0B4J249 113 aa11.08□□□□□ -0.64
SF3B3-215ENST00000577085 ZNF705GA8MUZ8 300 aaPredicted RBP11.08□□□□□ -0.64
SF3B3-215ENST00000577085 P0DMU3 169 aa11.08□□□□□ -0.64
SF3B3-215ENST00000577085 FAM231AP0DMU4 169 aa11.08□□□□□ -0.64
SF3B3-215ENST00000577085 FAM231CP0DMU5 169 aa11.08□□□□□ -0.64
SF3B3-215ENST00000577085 IGLC2P0DOY2 106 aa11.08□□□□□ -0.64
SF3B3-215ENST00000577085 PRB4P10163 310 aaPredicted RBP11.08□□□□□ -0.64
SF3B3-215ENST00000577085 HTN1P15515 57 aa11.08□□□□□ -0.64
SF3B3-215ENST00000577085 CDKN1BP46527 198 aa11.08□□□□□ -0.64
SF3B3-215ENST00000577085 OR5C1Q8NGR4 320 aa11.08□□□□□ -0.64
SF3B3-215ENST00000577085 CRXO43186 299 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-215ENST00000577085 TSPOP30536 169 aa11.07□□□□□ -0.64
SF3B3-215ENST00000577085 IFITM3Q01628 133 aa11.07□□□□□ -0.64
SF3B3-215ENST00000577085 NHLH2Q02577 135 aa11.07□□□□□ -0.64
SF3B3-215ENST00000577085 THAP6Q8TBB0 222 aa11.07□□□□□ -0.64
SF3B3-215ENST00000577085 NPCDR1Q9BY65 106 aa11.07□□□□□ -0.64
SF3B3-215ENST00000577085 BATF3Q9NR55 127 aa11.07□□□□□ -0.64
SF3B3-215ENST00000577085 H3BQ15 152 aa11.06□□□□□ -0.64
SF3B3-215ENST00000577085 SLC17A3O00476 420 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms