RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 CAMLGP49069 296 aa13.24□□□□□ -0.29
CLN6-204ENST00000564752 SULT1A1P50225 295 aa13.24□□□□□ -0.29
CLN6-204ENST00000564752 HBG1P69891 147 aa13.24□□□□□ -0.29
CLN6-204ENST00000564752 HBG2P69892 147 aa13.24□□□□□ -0.29
CLN6-204ENST00000564752 IFITM3Q01628 133 aa13.24□□□□□ -0.29
CLN6-204ENST00000564752 IL15RAQ13261 267 aa13.24□□□□□ -0.29
CLN6-204ENST00000564752 LINC00305Q7Z4B0 112 aa13.24□□□□□ -0.29
CLN6-204ENST00000564752 ZNF738Q8NE65 137 aa13.24□□□□□ -0.29
CLN6-204ENST00000564752 UBE2L5PA0A1B0GUS4 154 aa13.23□□□□□ -0.29
CLN6-204ENST00000564752 IGSF23A1L1A6 192 aa13.23□□□□□ -0.29
CLN6-204ENST00000564752 SMIM9A6NGZ8 99 aa13.23□□□□□ -0.29
CLN6-204ENST00000564752 PRAF2O60831 178 aa13.23□□□□□ -0.29
CLN6-204ENST00000564752 DUSP14O95147 198 aaKnown RBP13.23□□□□□ -0.29
CLN6-204ENST00000564752 NRARPQ7Z6K4 114 aa13.23□□□□□ -0.29
CLN6-204ENST00000564752 TMEM252Q8N6L7 170 aa13.23□□□□□ -0.29
CLN6-204ENST00000564752 LRRC20Q8TCA0 184 aa13.23□□□□□ -0.29
CLN6-204ENST00000564752 GOLT1BQ9Y3E0 138 aa13.23□□□□□ -0.29
CLN6-204ENST00000564752 TMEM189A5PLL7 270 aa13.22□□□□□ -0.29
CLN6-204ENST00000564752 A8MTW9 85 aa13.22□□□□□ -0.29
CLN6-204ENST00000564752 INMT-MINDY4F8WBC2 141 aa13.22□□□□□ -0.29
CLN6-204ENST00000564752 S100A11P31949 105 aa13.22□□□□□ -0.29
CLN6-204ENST00000564752 CNN1P51911 297 aaKnown RBP13.22□□□□□ -0.29
CLN6-204ENST00000564752 BAXQ07812 192 aa13.22□□□□□ -0.29
CLN6-204ENST00000564752 C10orf113Q5VZT2 155 aa13.22□□□□□ -0.29
CLN6-204ENST00000564752 NDUFAF3Q9BU61 184 aa13.22□□□□□ -0.29
CLN6-204ENST00000564752 WDR83OSQ9Y284 106 aa13.22□□□□□ -0.29
CLN6-204ENST00000564752 SIX6O95475 246 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 SPART-AS1P0CW21 52 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 P0DMU3 169 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 FAM231AP0DMU4 169 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 FAM231CP0DMU5 169 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 CXCL2P19875 107 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 CXCL3P19876 107 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 DEFA1P59665 94 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 DEFA3P59666 94 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 VWC2Q2TAL6 325 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 MIC13Q5XKP0 118 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 Q6ZRG5 221 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 LINC00336Q6ZUF6 198 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 BPIFA4PQ86YQ2 179 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 POM121L12Q8N7R1 296 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 RFNGQ9Y644 331 aa13.21□□□□□ -0.29
CLN6-204ENST00000564752 PKHD1P08F94 4074 aa13.2□□□□□ -0.3
CLN6-204ENST00000564752 MRPS12O15235 138 aaKnown RBP13.2□□□□□ -0.3
CLN6-204ENST00000564752 EMP1P54849 157 aa13.2□□□□□ -0.3
CLN6-204ENST00000564752 LCN15Q6UWW0 184 aa13.2□□□□□ -0.3
CLN6-204ENST00000564752 AMTNQ6UX39 209 aa13.2□□□□□ -0.3
CLN6-204ENST00000564752 TMEM37Q8WXS4 190 aa13.2□□□□□ -0.3
CLN6-204ENST00000564752 BATF3Q9NR55 127 aa13.2□□□□□ -0.3
CLN6-204ENST00000564752 HBE1P02100 147 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 RLN2P04090 185 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 HIST1H1AQ02539 215 aaPredicted RBP13.19□□□□□ -0.3
CLN6-204ENST00000564752 OPCMLQ14982 345 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 PSG3Q16557 428 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 ATP6V1FQ16864 119 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 SPINK13Q1W4C9 94 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 LRRC37A5PQ49AS3 106 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 MORN5Q5VZ52 161 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 C1orf158Q8N1D5 194 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 OR11H7Q8NGC8 314 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 OR1L4Q8NGR5 311 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 IGF2BP2-AS1Q96M15 143 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 PFDN5Q99471 154 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 SLC50A1Q9BRV3 221 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 TMEM208Q9BTX3 173 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 NMES1Q9C002 83 aa13.19□□□□□ -0.3
CLN6-204ENST00000564752 M0R2Z0 102 aa13.18□□□□□ -0.3
CLN6-204ENST00000564752 INSP01308 110 aa13.18□□□□□ -0.3
CLN6-204ENST00000564752 SNRPCP09234 159 aaKnown RBP13.18□□□□□ -0.3
CLN6-204ENST00000564752 FGF7P21781 194 aa13.18□□□□□ -0.3
CLN6-204ENST00000564752 B2MP61769 119 aa13.18□□□□□ -0.3
CLN6-204ENST00000564752 OR8A1Q8NGG7 326 aa13.18□□□□□ -0.3
CLN6-204ENST00000564752 MARVELD1Q9BSK0 173 aa13.18□□□□□ -0.3
CLN6-204ENST00000564752 DNAJC4Q9NNZ3 241 aa13.18□□□□□ -0.3
CLN6-204ENST00000564752 SLC39A9Q9NUM3 307 aa13.18□□□□□ -0.3
CLN6-204ENST00000564752 DKK2Q9UBU2 259 aa13.18□□□□□ -0.3
CLN6-204ENST00000564752 E5RGE8 158 aa13.17□□□□□ -0.3
CLN6-204ENST00000564752 BOLA2-SMG1P6H3BVE0 249 aa13.17□□□□□ -0.3
CLN6-204ENST00000564752 RPL29P47914 159 aaKnown RBP13.17□□□□□ -0.3
CLN6-204ENST00000564752 RHOBP62745 196 aa13.17□□□□□ -0.3
CLN6-204ENST00000564752 CYCSP99999 105 aaKnown RBP13.17□□□□□ -0.3
CLN6-204ENST00000564752 SLC25A31Q9H0C2 315 aa13.17□□□□□ -0.3
CLN6-204ENST00000564752 ZNF331Q9NQX6 463 aaPredicted RBP13.17□□□□□ -0.3
CLN6-204ENST00000564752 PXMP4Q9Y6I8 212 aa13.17□□□□□ -0.3
CLN6-204ENST00000564752 DYNC1H1Q14204 4646 aaKnown RBP13.16□□□□□ -0.3
CLN6-204ENST00000564752 TEX48A0A1B0GUV7 120 aa13.16□□□□□ -0.3
CLN6-204ENST00000564752 LOC102723971A0A1B0GUV8 181 aa13.16□□□□□ -0.3
CLN6-204ENST00000564752 MPDU1O75352 247 aa13.16□□□□□ -0.3
CLN6-204ENST00000564752 RRN3P1Q2M238 152 aa13.16□□□□□ -0.3
CLN6-204ENST00000564752 FAM222AQ5U5X8 452 aa13.16□□□□□ -0.3
CLN6-204ENST00000564752 RPUSD4Q96CM3 377 aaKnown RBP13.16□□□□□ -0.3
CLN6-204ENST00000564752 FAM210BQ96KR6 192 aa13.16□□□□□ -0.3
CLN6-204ENST00000564752 PPP1R14DQ9NXH3 145 aa13.16□□□□□ -0.3
CLN6-204ENST00000564752 OR5AC2Q9NZP5 309 aa13.16□□□□□ -0.3
CLN6-204ENST00000564752 DNAH11Q96DT5 4516 aa13.15□□□□□ -0.3
CLN6-204ENST00000564752 A0A1B0GVY2 172 aa13.15□□□□□ -0.3
CLN6-204ENST00000564752 H3BTX0 84 aa13.15□□□□□ -0.3
CLN6-204ENST00000564752 SSNA1O43805 119 aa13.15□□□□□ -0.3
CLN6-204ENST00000564752 IGLC2P0DOY2 106 aa13.15□□□□□ -0.3
CLN6-204ENST00000564752 BAP18Q8IXM2 172 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms