RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 LRRC37A5PQ49AS3 106 aa8.97□□□□□ -0.97
SMAD3-208ENST00000558827 AMTNQ6UX39 209 aa8.97□□□□□ -0.97
SMAD3-208ENST00000558827 ZNF546Q86UE3 836 aa8.97□□□□□ -0.97
SMAD3-208ENST00000558827 BAP18Q8IXM2 172 aa8.97□□□□□ -0.97
SMAD3-208ENST00000558827 OR11H7Q8NGC8 314 aa8.97□□□□□ -0.97
SMAD3-208ENST00000558827 HRH4Q9H3N8 390 aa8.97□□□□□ -0.97
SMAD3-208ENST00000558827 IGHV4-4A0A075B6R2 117 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 C11orf94C9JXX5 98 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 MRPS12O15235 138 aaKnown RBP8.96□□□□□ -0.98
SMAD3-208ENST00000558827 CXCL3P19876 107 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 BAXQ07812 192 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 IL15RAQ13261 267 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 OPCMLQ14982 345 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 PSG3Q16557 428 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 FAM222AQ5U5X8 452 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 SAMD13Q5VXD3 122 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 C10orf113Q5VZT2 155 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 SPATA31B1PQ5VZV4 182 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 LGALS9CQ6DKI2 356 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 TMEM252Q8N6L7 170 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 GGACTQ9BVM4 153 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 PARD6GQ9BYG4 376 aaPredicted RBP8.96□□□□□ -0.98
SMAD3-208ENST00000558827 GPN1Q9HCN4 374 aaPredicted RBP8.96□□□□□ -0.98
SMAD3-208ENST00000558827 UQCC1Q9NVA1 299 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 PPP1R14DQ9NXH3 145 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 RFNGQ9Y644 331 aa8.96□□□□□ -0.98
SMAD3-208ENST00000558827 LOC102723971A0A1B0GUV8 181 aa8.95□□□□□ -0.98
SMAD3-208ENST00000558827 PRAC2D3DTV9 90 aa8.95□□□□□ -0.98
SMAD3-208ENST00000558827 INMT-MINDY4F8WBC2 141 aa8.95□□□□□ -0.98
SMAD3-208ENST00000558827 SLC17A3O00476 420 aa8.95□□□□□ -0.98
SMAD3-208ENST00000558827 DUSP14O95147 198 aaKnown RBP8.95□□□□□ -0.98
SMAD3-208ENST00000558827 HBE1P02100 147 aa8.95□□□□□ -0.98
SMAD3-208ENST00000558827 SPART-AS1P0CW21 52 aa8.95□□□□□ -0.98
SMAD3-208ENST00000558827 FGF7P21781 194 aa8.95□□□□□ -0.98
SMAD3-208ENST00000558827 SULT1A1P50225 295 aa8.95□□□□□ -0.98
SMAD3-208ENST00000558827 NHLH2Q02577 135 aa8.95□□□□□ -0.98
SMAD3-208ENST00000558827 OR8A1Q8NGG7 326 aa8.95□□□□□ -0.98
SMAD3-208ENST00000558827 RPUSD4Q96CM3 377 aaKnown RBP8.95□□□□□ -0.98
SMAD3-208ENST00000558827 CLUHP3Q96NS8 147 aa8.95□□□□□ -0.98
SMAD3-208ENST00000558827 DNAJC4Q9NNZ3 241 aa8.95□□□□□ -0.98
SMAD3-208ENST00000558827 LYRM2Q9NU23 88 aaPredicted RBP8.95□□□□□ -0.98
SMAD3-208ENST00000558827 WDR83OSQ9Y284 106 aa8.95□□□□□ -0.98
SMAD3-208ENST00000558827 A0A087X0K7 114 aa8.94□□□□□ -0.98
SMAD3-208ENST00000558827 SMIM9A6NGZ8 99 aa8.94□□□□□ -0.98
SMAD3-208ENST00000558827 H3BQ15 152 aa8.94□□□□□ -0.98
SMAD3-208ENST00000558827 J3KRW8 73 aa8.94□□□□□ -0.98
SMAD3-208ENST00000558827 CRXO43186 299 aaPredicted RBP8.94□□□□□ -0.98
SMAD3-208ENST00000558827 HTN1P15515 57 aa8.94□□□□□ -0.98
SMAD3-208ENST00000558827 RAB31Q13636 194 aa8.94□□□□□ -0.98
SMAD3-208ENST00000558827 KIR3DS1Q14943 382 aa8.94□□□□□ -0.98
SMAD3-208ENST00000558827 FCN2Q15485 313 aa8.94□□□□□ -0.98
SMAD3-208ENST00000558827 RRN3P1Q2M238 152 aa8.94□□□□□ -0.98
SMAD3-208ENST00000558827 Q6ZRG5 221 aa8.94□□□□□ -0.98
SMAD3-208ENST00000558827 STX12Q86Y82 276 aa8.94□□□□□ -0.98
SMAD3-208ENST00000558827 IGF2BP2-AS1Q96M15 143 aa8.94□□□□□ -0.98
SMAD3-208ENST00000558827 NEU1Q99519 415 aa8.94□□□□□ -0.98
SMAD3-208ENST00000558827 OR5AC2Q9NZP5 309 aa8.94□□□□□ -0.98
SMAD3-208ENST00000558827 DKK2Q9UBU2 259 aa8.94□□□□□ -0.98
SMAD3-208ENST00000558827 YTHDF2Q9Y5A9 579 aaKnown RBP8.94□□□□□ -0.98
SMAD3-208ENST00000558827 A8MTW9 85 aa8.93□□□□□ -0.98
SMAD3-208ENST00000558827 H0YIZ8 118 aa8.93□□□□□ -0.98
SMAD3-208ENST00000558827 AZU1P20160 251 aa8.93□□□□□ -0.98
SMAD3-208ENST00000558827 S100A11P31949 105 aa8.93□□□□□ -0.98
SMAD3-208ENST00000558827 B2MP61769 119 aa8.93□□□□□ -0.98
SMAD3-208ENST00000558827 CLINT1Q14677 625 aa8.93□□□□□ -0.98
SMAD3-208ENST00000558827 GCSAMLQ5JQS6 135 aa8.93□□□□□ -0.98
SMAD3-208ENST00000558827 S100A7AQ86SG5 101 aa8.93□□□□□ -0.98
SMAD3-208ENST00000558827 BPIFA4PQ86YQ2 179 aa8.93□□□□□ -0.98
SMAD3-208ENST00000558827 THAP6Q8TBB0 222 aa8.93□□□□□ -0.98
SMAD3-208ENST00000558827 LINC01587Q99440 93 aa8.93□□□□□ -0.98
SMAD3-208ENST00000558827 NIPSNAP3BQ9BS92 247 aa8.93□□□□□ -0.98
SMAD3-208ENST00000558827 SLC39A9Q9NUM3 307 aa8.93□□□□□ -0.98
SMAD3-208ENST00000558827 PXMP4Q9Y6I8 212 aa8.93□□□□□ -0.98
SMAD3-208ENST00000558827 DNAH6Q9C0G6 4158 aa8.93□□□□□ -0.98
SMAD3-208ENST00000558827 BOLA2-SMG1P6H3BVE0 249 aa8.92□□□□□ -0.98
SMAD3-208ENST00000558827 INSP01308 110 aa8.92□□□□□ -0.98
SMAD3-208ENST00000558827 PXDC1Q5TGL8 231 aa8.92□□□□□ -0.98
SMAD3-208ENST00000558827 ZNF331Q9NQX6 463 aaPredicted RBP8.92□□□□□ -0.98
SMAD3-208ENST00000558827 FRAS1Q86XX4 4008 aa8.91□□□□□ -0.98
SMAD3-208ENST00000558827 TMEM189A5PLL7 270 aa8.91□□□□□ -0.98
SMAD3-208ENST00000558827 SSNA1O43805 119 aa8.91□□□□□ -0.98
SMAD3-208ENST00000558827 RLN2P04090 185 aa8.91□□□□□ -0.98
SMAD3-208ENST00000558827 PYYP10082 97 aa8.91□□□□□ -0.98
SMAD3-208ENST00000558827 HBG1P69891 147 aa8.91□□□□□ -0.98
SMAD3-208ENST00000558827 HBG2P69892 147 aa8.91□□□□□ -0.98
SMAD3-208ENST00000558827 VWC2Q2TAL6 325 aa8.91□□□□□ -0.98
SMAD3-208ENST00000558827 LCN15Q6UWW0 184 aa8.91□□□□□ -0.98
SMAD3-208ENST00000558827 OR5C1Q8NGR4 320 aa8.91□□□□□ -0.98
SMAD3-208ENST00000558827 OR1L4Q8NGR5 311 aa8.91□□□□□ -0.98
SMAD3-208ENST00000558827 RNF126Q9BV68 326 aa8.91□□□□□ -0.98
SMAD3-208ENST00000558827 ZNF586Q9NXT0 402 aa8.91□□□□□ -0.98
SMAD3-208ENST00000558827 IGLC2P0DOY2 106 aa8.9□□□□□ -0.98
SMAD3-208ENST00000558827 DEFB130BP0DP73 79 aa8.9□□□□□ -0.98
SMAD3-208ENST00000558827 DEFB130AP0DP74 79 aa8.9□□□□□ -0.98
SMAD3-208ENST00000558827 RPL29P47914 159 aaKnown RBP8.9□□□□□ -0.98
SMAD3-208ENST00000558827 H2BFSP57053 126 aa8.9□□□□□ -0.98
SMAD3-208ENST00000558827 DEFA1P59665 94 aa8.9□□□□□ -0.98
SMAD3-208ENST00000558827 DEFA3P59666 94 aa8.9□□□□□ -0.98
SMAD3-208ENST00000558827 DAD1P61803 113 aa8.9□□□□□ -0.98
SMAD3-208ENST00000558827 BLNKQ8WV28 456 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms