RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 HSPB8Q9UJY1 196 aa3.26□□□□□ -1.89
CPSF6-206ENST00000550987 VPS13BQ7Z7G8 4022 aa3.26□□□□□ -1.89
CPSF6-206ENST00000550987 IGKV2-28A0A075B6P5 120 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 hADV38S2A0JD32 116 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 TRAPPC13A5PLN9 417 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 ZNF850A8MQ14 1090 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 TP53I11O14683 189 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 IGKV2D-28P01615 120 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 HBZP02008 142 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 C1QAP02745 245 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 C1QBP02746 253 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 CRYBA1P05813 215 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 PFN1P07737 140 aaKnown RBP3.25□□□□□ -1.89
CPSF6-206ENST00000550987 LGALS7P47929 136 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 RUNX1Q01196 453 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 ATP5G2Q06055 141 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 TMEM267Q0VDI3 215 aaPredicted RBP3.25□□□□□ -1.89
CPSF6-206ENST00000550987 ABCA11PQ4W5N1 156 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 HAGHLQ6PII5 290 aaPredicted RBP3.25□□□□□ -1.89
CPSF6-206ENST00000550987 ZNF773Q6PK81 442 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 IFT20Q8IY31 132 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 GPR146Q96CH1 333 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 C14orf144Q96I85 54 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 RTBDNQ9BSG5 229 aaPredicted RBP3.25□□□□□ -1.89
CPSF6-206ENST00000550987 OR8D2Q9GZM6 311 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 SLC25A31Q9H0C2 315 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 MRPL27Q9P0M9 148 aaKnown RBP3.25□□□□□ -1.89
CPSF6-206ENST00000550987 LAMTOR3Q9UHA4 124 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 BOKQ9UMX3 212 aaPredicted RBP3.25□□□□□ -1.89
CPSF6-206ENST00000550987 HDGFL3Q9Y3E1 203 aa3.25□□□□□ -1.89
CPSF6-206ENST00000550987 CHCHD2Q9Y6H1 151 aaPredicted RBP3.25□□□□□ -1.89
CPSF6-206ENST00000550987 hCG_1818297A0A087WSY0 165 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 PGPA6NDG6 321 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 BTNL10A8MVZ5 291 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 C9JQL5 133 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 COX7A2P2O60397 106 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 PDCD6O75340 191 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 SERPINE1P05121 402 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 CD28P10747 220 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 SLC25A16P16260 332 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 ZNF708P17019 499 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 ORM2P19652 201 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 IMPA1P29218 277 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 REG1BP48304 166 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 EMP1P54849 157 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 RRAS2P62070 204 aaPredicted RBP3.24□□□□□ -1.89
CPSF6-206ENST00000550987 SELENOWP63302 87 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 OR8B8Q15620 311 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 SSX1Q16384 188 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 LTC4SQ16873 150 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 SCGB2B2Q4G0G5 96 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 MORN2Q502X0 79 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 TMEM69Q5SWH9 247 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 FAM201AQ5SY85 155 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 LINC00596Q86U02 117 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 CNEP1R1Q8N9A8 125 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 MORN4Q8NDC4 146 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 SLC30A7Q8NEW0 376 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 OR5K1Q8NHB7 308 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 ZNF721Q8TF20 911 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 PLEKHB2Q96CS7 222 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 LINC00477Q96M19 166 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 CCDC115Q96NT0 180 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 ANAPC13Q9BS18 74 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 ZNF471Q9BX82 626 aaPredicted RBP3.24□□□□□ -1.89
CPSF6-206ENST00000550987 EIF5A2Q9GZV4 153 aaKnown RBP3.24□□□□□ -1.89
CPSF6-206ENST00000550987 CHST6Q9GZX3 395 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 PBOV1Q9GZY1 135 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 CA10Q9NS85 328 aa3.24□□□□□ -1.89
CPSF6-206ENST00000550987 LRP1Q07954 4544 aaKnown RBP3.23□□□□□ -1.89
CPSF6-206ENST00000550987 TRAV36DV7A0A075B6V5 113 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 C4orf51C9J302 202 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 H3BSA7 217 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 IGF2P01344 180 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 SEC11BP0C7V7 166 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 SCGB1C2P0DMR2 95 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 CXCL3P19876 107 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 RPS3P23396 243 aaKnown RBP eCLIP3.23□□□□□ -1.89
CPSF6-206ENST00000550987 PRTN3P24158 256 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 RPL22P35268 128 aaKnown RBP3.23□□□□□ -1.89
CPSF6-206ENST00000550987 GLRXP35754 106 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 AKR1D1P51857 326 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 GNG5P63218 68 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 PRDX4Q13162 271 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 FAM222AQ5U5X8 452 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 ZNF880Q6PDB4 577 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 SBSNQ6UWP8 590 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 PRNTQ86SH4 94 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 CTAGE3PQ8IX95 158 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 PDZD9Q8IXQ8 264 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 DEFB125Q8N687 156 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 ZNF615Q8N8J6 731 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 GDPD1Q8N9F7 314 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 SCGB1C1Q8TD33 95 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 GPR119Q8TDV5 335 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 THEM6Q8WUY1 208 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 RTN4IP1Q8WWV3 396 aaPredicted RBP3.23□□□□□ -1.89
CPSF6-206ENST00000550987 ARL11Q969Q4 196 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 YPEL4Q96NS1 127 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 SPIN2AQ99865 258 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms