RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ATP6V1FQ16864 119 aa9.52□□□□□ -0.89
PRKDC-206ENST00000536429 GCSAMLQ5JQS6 135 aa9.52□□□□□ -0.89
PRKDC-206ENST00000536429 SAMD13Q5VXD3 122 aa9.52□□□□□ -0.89
PRKDC-206ENST00000536429 EBLN2Q6P2I7 272 aa9.52□□□□□ -0.89
PRKDC-206ENST00000536429 DNAJC4Q9NNZ3 241 aa9.52□□□□□ -0.89
PRKDC-206ENST00000536429 RPRMQ9NS64 109 aa9.52□□□□□ -0.89
PRKDC-206ENST00000536429 SLC39A9Q9NUM3 307 aa9.52□□□□□ -0.89
PRKDC-206ENST00000536429 PXMP4Q9Y6I8 212 aa9.52□□□□□ -0.89
PRKDC-206ENST00000536429 ELOA3CA0A087WX78 387 aaPredicted RBP9.51□□□□□ -0.89
PRKDC-206ENST00000536429 H3BQ15 152 aa9.51□□□□□ -0.89
PRKDC-206ENST00000536429 SLC17A3O00476 420 aa9.51□□□□□ -0.89
PRKDC-206ENST00000536429 NUTF2P61970 127 aaKnown RBP9.51□□□□□ -0.89
PRKDC-206ENST00000536429 AMTNQ6UX39 209 aa9.51□□□□□ -0.89
PRKDC-206ENST00000536429 Q6ZRG5 221 aa9.51□□□□□ -0.89
PRKDC-206ENST00000536429 CHAC2Q8WUX2 184 aa9.51□□□□□ -0.89
PRKDC-206ENST00000536429 NPCDR1Q9BY65 106 aa9.51□□□□□ -0.89
PRKDC-206ENST00000536429 SLC25A31Q9H0C2 315 aa9.51□□□□□ -0.89
PRKDC-206ENST00000536429 MBD2Q9UBB5 411 aa9.51□□□□□ -0.89
PRKDC-206ENST00000536429 A8MTW9 85 aa9.5□□□□□ -0.89
PRKDC-206ENST00000536429 IGLC2P0DOY2 106 aa9.5□□□□□ -0.89
PRKDC-206ENST00000536429 CNN1P51911 297 aaKnown RBP9.5□□□□□ -0.89
PRKDC-206ENST00000536429 PSG9Q00887 426 aa9.5□□□□□ -0.89
PRKDC-206ENST00000536429 FCN2Q15485 313 aa9.5□□□□□ -0.89
PRKDC-206ENST00000536429 SPATA31B1PQ5VZV4 182 aa9.5□□□□□ -0.89
PRKDC-206ENST00000536429 CEMP1Q6PRD7 247 aaPredicted RBP9.5□□□□□ -0.89
PRKDC-206ENST00000536429 ZNF705AQ6ZN79 300 aaPredicted RBP9.5□□□□□ -0.89
PRKDC-206ENST00000536429 S100A7AQ86SG5 101 aa9.5□□□□□ -0.89
PRKDC-206ENST00000536429 ZNF738Q8NE65 137 aa9.5□□□□□ -0.89
PRKDC-206ENST00000536429 C11orf45Q8TAV5 145 aa9.5□□□□□ -0.89
PRKDC-206ENST00000536429 CLUHP3Q96NS8 147 aa9.5□□□□□ -0.89
PRKDC-206ENST00000536429 MFFQ9GZY8 342 aa9.5□□□□□ -0.89
PRKDC-206ENST00000536429 ZNF705FA8MVS1 300 aaPredicted RBP9.49□□□□□ -0.89
PRKDC-206ENST00000536429 MIFP14174 115 aa9.49□□□□□ -0.89
PRKDC-206ENST00000536429 PSG3Q16557 428 aa9.49□□□□□ -0.89
PRKDC-206ENST00000536429 BPIFA4PQ86YQ2 179 aa9.49□□□□□ -0.89
PRKDC-206ENST00000536429 C1orf158Q8N1D5 194 aa9.49□□□□□ -0.89
PRKDC-206ENST00000536429 OR11H7Q8NGC8 314 aa9.49□□□□□ -0.89
PRKDC-206ENST00000536429 OR1L4Q8NGR5 311 aa9.49□□□□□ -0.89
PRKDC-206ENST00000536429 PHLDA1Q8WV24 401 aaPredicted RBP9.49□□□□□ -0.89
PRKDC-206ENST00000536429 C1QTNF4Q9BXJ3 329 aa9.49□□□□□ -0.89
PRKDC-206ENST00000536429 SMIM3Q9BZL3 60 aa9.49□□□□□ -0.89
PRKDC-206ENST00000536429 WDR61Q9GZS3 305 aaKnown RBP9.49□□□□□ -0.89
PRKDC-206ENST00000536429 ZNF331Q9NQX6 463 aaPredicted RBP9.49□□□□□ -0.89
PRKDC-206ENST00000536429 CELA1Q9UNI1 258 aa9.49□□□□□ -0.89
PRKDC-206ENST00000536429 DNAH6Q9C0G6 4158 aa9.49□□□□□ -0.89
PRKDC-206ENST00000536429 IGHV3OR16-12A0A075B7B8 117 aa9.48□□□□□ -0.89
PRKDC-206ENST00000536429 M0R2Z0 102 aa9.48□□□□□ -0.89
PRKDC-206ENST00000536429 MPDU1O75352 247 aa9.48□□□□□ -0.89
PRKDC-206ENST00000536429 RPL12P30050 165 aaKnown RBP9.48□□□□□ -0.89
PRKDC-206ENST00000536429 LCN15Q6UWW0 184 aa9.48□□□□□ -0.89
PRKDC-206ENST00000536429 LRRC20Q8TCA0 184 aa9.48□□□□□ -0.89
PRKDC-206ENST00000536429 SAT2Q96F10 170 aaPredicted RBP9.48□□□□□ -0.89
PRKDC-206ENST00000536429 PFDN5Q99471 154 aa9.48□□□□□ -0.89
PRKDC-206ENST00000536429 WFDC1Q9HC57 220 aa9.48□□□□□ -0.89
PRKDC-206ENST00000536429 ZNF586Q9NXT0 402 aa9.48□□□□□ -0.89
PRKDC-206ENST00000536429 HSPB11Q9Y547 144 aa9.48□□□□□ -0.89
PRKDC-206ENST00000536429 EPPK1P58107 5090 aaKnown RBP9.48□□□□□ -0.89
PRKDC-206ENST00000536429 NUPR2A6NF83 97 aa9.47□□□□□ -0.89
PRKDC-206ENST00000536429 PRAC2D3DTV9 90 aa9.47□□□□□ -0.89
PRKDC-206ENST00000536429 CRXO43186 299 aaPredicted RBP9.47□□□□□ -0.89
PRKDC-206ENST00000536429 CXCL2P19875 107 aa9.47□□□□□ -0.89
PRKDC-206ENST00000536429 HIST1H1AQ02539 215 aaPredicted RBP9.47□□□□□ -0.89
PRKDC-206ENST00000536429 SPINK13Q1W4C9 94 aa9.47□□□□□ -0.89
PRKDC-206ENST00000536429 MIR17HGQ75NE6 70 aa9.47□□□□□ -0.89
PRKDC-206ENST00000536429 OR8A1Q8NGG7 326 aa9.47□□□□□ -0.89
PRKDC-206ENST00000536429 RPUSD4Q96CM3 377 aaKnown RBP9.47□□□□□ -0.89
PRKDC-206ENST00000536429 ATP5SQ99766 215 aa9.47□□□□□ -0.89
PRKDC-206ENST00000536429 HRH4Q9H3N8 390 aa9.47□□□□□ -0.89
PRKDC-206ENST00000536429 RNF24Q9Y225 148 aa9.47□□□□□ -0.89
PRKDC-206ENST00000536429 RFNGQ9Y644 331 aa9.47□□□□□ -0.89
PRKDC-206ENST00000536429 DUSP14O95147 198 aaKnown RBP9.46□□□□□ -0.9
PRKDC-206ENST00000536429 PRM2P04554 102 aa9.46□□□□□ -0.9
PRKDC-206ENST00000536429 PET100P0DJ07 73 aa9.46□□□□□ -0.9
PRKDC-206ENST00000536429 PYYP10082 97 aa9.46□□□□□ -0.9
PRKDC-206ENST00000536429 Q5BKY6 102 aa9.46□□□□□ -0.9
PRKDC-206ENST00000536429 ZNF767PQ75MW2 155 aa9.46□□□□□ -0.9
PRKDC-206ENST00000536429 BAP18Q8IXM2 172 aa9.46□□□□□ -0.9
PRKDC-206ENST00000536429 FAM167A-AS1Q96KT0 104 aa9.46□□□□□ -0.9
PRKDC-206ENST00000536429 SLC25A2Q9BXI2 301 aa9.46□□□□□ -0.9
PRKDC-206ENST00000536429 MED28Q9H204 178 aa9.46□□□□□ -0.9
PRKDC-206ENST00000536429 DNAH10Q8IVF4 4471 aa9.45□□□□□ -0.9
PRKDC-206ENST00000536429 TRAV12-2A0A075B6T6 113 aa9.45□□□□□ -0.9
PRKDC-206ENST00000536429 NDUFB4O95168 129 aa9.45□□□□□ -0.9
PRKDC-206ENST00000536429 EMP1P54849 157 aa9.45□□□□□ -0.9
PRKDC-206ENST00000536429 Q6ZTC4 211 aa9.45□□□□□ -0.9
PRKDC-206ENST00000536429 IGF2BP2-AS1Q96M15 143 aa9.45□□□□□ -0.9
PRKDC-206ENST00000536429 NEU1Q99519 415 aa9.45□□□□□ -0.9
PRKDC-206ENST00000536429 SLC50A1Q9BRV3 221 aa9.45□□□□□ -0.9
PRKDC-206ENST00000536429 TRBV19A0A075B6N1 114 aa9.44□□□□□ -0.9
PRKDC-206ENST00000536429 BOLA2-SMG1P6H3BVE0 249 aa9.44□□□□□ -0.9
PRKDC-206ENST00000536429 EIF3GO75821 320 aaKnown RBP eCLIP9.44□□□□□ -0.9
PRKDC-206ENST00000536429 JTBO76095 146 aa9.44□□□□□ -0.9
PRKDC-206ENST00000536429 RHOBP62745 196 aa9.44□□□□□ -0.9
PRKDC-206ENST00000536429 KIR3DS1Q14943 382 aa9.44□□□□□ -0.9
PRKDC-206ENST00000536429 C12orf74Q32Q52 190 aa9.44□□□□□ -0.9
PRKDC-206ENST00000536429 PARD6GQ9BYG4 376 aaPredicted RBP9.44□□□□□ -0.9
PRKDC-206ENST00000536429 TMEM14CQ9P0S9 112 aa9.44□□□□□ -0.9
PRKDC-206ENST00000536429 GOLT1BQ9Y3E0 138 aa9.44□□□□□ -0.9
PRKDC-206ENST00000536429 M0R3E3 92 aa9.43□□□□□ -0.9
PRKDC-206ENST00000536429 OXA1LQ15070 435 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms