RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	TMBIM6	P55061	237 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	NDUFA6	P56556	154 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	HBB	P68871	147 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	VMA21	Q3ZAQ7	101 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	HRCT1	Q6UXD1	115 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	PATE2	Q6UY27	113 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	ZNF826P	Q6ZT77	177 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	PDZD9	Q8IXQ8	264 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	IFT20	Q8IY31	132 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	TCTE3	Q8IZS6	198 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	LRRC18	Q8N456	261 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	WFDC11	Q8NEX6	87 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	OR4S1	Q8NGB4	309 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	OR4E2	Q8NGC2	313 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	OR2T10	Q8NGZ9	312 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	NAT14	Q8WUY8	206 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	MAGOHB	Q96A72	148 aa	Known RBP	0.8	□□□□□ -2.28
RDX-215	ENST00000533961	TSC22D3	Q99576	134 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	RETNLB	Q9BQ08	111 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	GINS4	Q9BRT9	223 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	LXN	Q9BS40	222 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	ADAT1	Q9BUB4	502 aa	Known RBP	0.8	□□□□□ -2.28
RDX-215	ENST00000533961	FAM107B	Q9H098	131 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	HIGD1A	Q9Y241	93 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	HS3ST2	Q9Y278	367 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	RNF11	Q9Y3C5	154 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	HEATR5A	Q86XA9	2040 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	FANCM	Q8IYD8	2048 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	NUMA1	Q14980	2115 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	RFX7	Q2KHR2	1363 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	SOGA1	O94964	1423 aa		0.8	□□□□□ -2.28
RDX-215	ENST00000533961	PRG4	Q92954	1404 aa	Predicted RBP	0.8	□□□□□ -2.28
RDX-215	ENST00000533961	KDM5C	P41229	1560 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	NALCN	Q8IZF0	1738 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	TRBV27	A0A0K0K1C4	114 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	LOC107984640	A0A0U1RRK4	108 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	IBA57-AS1	B1ANH7	110 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	C5orf58	C9J3I9	102 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	NDUFB3	O43676	98 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	TPST1	O60507	370 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	CST8	O60676	142 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	LYZL6	O75951	148 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	SHBG	P04278	402 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	CTSD	P07339	412 aa	Predicted RBP	0.79	□□□□□ -2.28
RDX-215	ENST00000533961	COX4I1	P13073	169 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	MIF	P14174	115 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	RPL22	P35268	128 aa	Known RBP	0.79	□□□□□ -2.28
RDX-215	ENST00000533961	DYNLT1	P63172	113 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	QRFP	P83859	136 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	RHOG	P84095	191 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	PRB3	Q04118	309 aa	Predicted RBP	0.79	□□□□□ -2.28
RDX-215	ENST00000533961	KHDC3L	Q587J8	217 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	SPANXN5	Q5MJ07	72 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	EIF5AL1	Q6IS14	154 aa	Known RBP	0.79	□□□□□ -2.28
RDX-215	ENST00000533961	TMEM14EP	Q6UXP3	125 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	DPPA3	Q6W0C5	159 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961		Q6ZQT0	140 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	AAED1	Q7RTV5	226 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	C9orf163	Q8N9P6	203 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	OR8B3	Q8NGG8	313 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	OR5A2	Q8NGI9	324 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	OR5D16	Q8NGK9	328 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	OR4K15	Q8NH41	348 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	OR4C6	Q8NH72	309 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	DIRC1	Q969H9	104 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	PRADC1	Q9BSG0	188 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	NPCDR1	Q9BY65	106 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	CBLN4	Q9NTU7	201 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	TRAPPC2L	Q9UL33	140 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	BAIAP2	Q9UQB8	552 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	MYLK	Q15746	1914 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	DISP2	A7MBM2	1401 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	TNS3	Q68CZ2	1445 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	ZNF518A	Q6AHZ1	1483 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	FAM135A	Q9P2D6	1515 aa		0.79	□□□□□ -2.28
RDX-215	ENST00000533961	EIF4G3	O43432	1585 aa	Known RBP	0.79	□□□□□ -2.28
RDX-215	ENST00000533961	WDR97	A6NE52	1622 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	SPEF2	Q9C093	1822 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	IGKV1D-42	A0A075B6H8	117 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	TRAV13-1	A0A0B4J241	112 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	MIF4GD	A9UHW6	222 aa	Known RBP	0.78	□□□□□ -2.28
RDX-215	ENST00000533961		H3BMG7	143 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	PMP2	P02689	132 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	CXCL1	P09341	107 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	BAALC-AS2	P0C853	105 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	CCL4	P13236	92 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	CRYGS	P22914	178 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	ZNF93	P35789	620 aa	Predicted RBP	0.78	□□□□□ -2.28
RDX-215	ENST00000533961	ARPP19	P56211	112 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	DNAJB13	P59910	316 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	SELENOW	P63302	87 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	ASB16-AS1	Q495Z4	193 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	RPL13AP3	Q6NVV1	102 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	LCN15	Q6UWW0	184 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	LINC00305	Q7Z4B0	112 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	MORN4	Q8NDC4	146 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	SLC30A7	Q8NEW0	376 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	OR51A4	Q8NGJ6	313 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	CCL4L1	Q8NHW4	92 aa		0.78	□□□□□ -2.28
RDX-215	ENST00000533961	AQP3	Q92482	292 aa		0.78	□□□□□ -2.28

Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms