RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 OR5G3P0C626 314 aa7.48□□□□□ -1.21
CPSF1-203ENST00000527916 FXYD7P58549 80 aa7.48□□□□□ -1.21
CPSF1-203ENST00000527916 B2MP61769 119 aa7.48□□□□□ -1.21
CPSF1-203ENST00000527916 ARL16Q0P5N6 197 aa7.48□□□□□ -1.21
CPSF1-203ENST00000527916 ZNF846Q147U1 533 aa7.48□□□□□ -1.21
CPSF1-203ENST00000527916 OXA1LQ15070 435 aa7.48□□□□□ -1.21
CPSF1-203ENST00000527916 PATE2Q6UY27 113 aa7.48□□□□□ -1.21
CPSF1-203ENST00000527916 ZNF546Q86UE3 836 aa7.48□□□□□ -1.21
CPSF1-203ENST00000527916 IGF2BP2-AS1Q96M15 143 aa7.48□□□□□ -1.21
CPSF1-203ENST00000527916 ARL6Q9H0F7 186 aa7.48□□□□□ -1.21
CPSF1-203ENST00000527916 DNAH5Q8TE73 4624 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 IGHV3OR16-12A0A075B7B8 117 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 L7N2F9 121 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 AGPAT2O15120 278 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 HBE1P02100 147 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 H2AFB2P0C5Z0 115 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 CXCL2P19875 107 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 CNN1P51911 297 aaKnown RBP7.47□□□□□ -1.21
CPSF1-203ENST00000527916 FAM3BP58499 235 aaPredicted RBP7.47□□□□□ -1.21
CPSF1-203ENST00000527916 VAMP2P63027 116 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 TNP2Q05952 138 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 IL15RAQ13261 267 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 GSG1LQ6UXU4 331 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 C12orf45Q8N5I9 185 aaPredicted RBP7.47□□□□□ -1.21
CPSF1-203ENST00000527916 S100ZQ8WXG8 99 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 C2orf50Q96LR7 162 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 UHRF2Q96PU4 802 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 ARV1Q9H2C2 271 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 C11orf1Q9H5F2 150 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 NUDT15Q9NV35 164 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 DKK2Q9UBU2 259 aa7.47□□□□□ -1.21
CPSF1-203ENST00000527916 TRAV6A0A075B6T7 132 aa7.46□□□□□ -1.22
CPSF1-203ENST00000527916 C5orf51A6NDU8 294 aa7.46□□□□□ -1.22
CPSF1-203ENST00000527916 CCSO14618 274 aa7.46□□□□□ -1.22
CPSF1-203ENST00000527916 MRPS12O15235 138 aaKnown RBP7.46□□□□□ -1.22
CPSF1-203ENST00000527916 CXCL3P19876 107 aa7.46□□□□□ -1.22
CPSF1-203ENST00000527916 FGL1Q08830 312 aa7.46□□□□□ -1.22
CPSF1-203ENST00000527916 SLC38A11Q08AI6 406 aa7.46□□□□□ -1.22
CPSF1-203ENST00000527916 RAB31Q13636 194 aa7.46□□□□□ -1.22
CPSF1-203ENST00000527916 PSG3Q16557 428 aa7.46□□□□□ -1.22
CPSF1-203ENST00000527916 RRN3P1Q2M238 152 aa7.46□□□□□ -1.22
CPSF1-203ENST00000527916 OR11H7Q8NGC8 314 aa7.46□□□□□ -1.22
CPSF1-203ENST00000527916 SEC22CQ9BRL7 303 aa7.46□□□□□ -1.22
CPSF1-203ENST00000527916 NIPSNAP3BQ9BS92 247 aa7.46□□□□□ -1.22
CPSF1-203ENST00000527916 NACAE9PAV3 2078 aa7.46□□□□□ -1.22
CPSF1-203ENST00000527916 LOC102723971A0A1B0GUV8 181 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 FAM240BA0A1B0GVZ2 78 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 FAM25EA8MYX2 175 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 CRXO43186 299 aaPredicted RBP7.45□□□□□ -1.22
CPSF1-203ENST00000527916 PVALBP20472 110 aaPredicted RBP7.45□□□□□ -1.22
CPSF1-203ENST00000527916 ASAH1Q13510 395 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 VWC2Q2TAL6 325 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 FAM222AQ5U5X8 452 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 IGFL4Q6B9Z1 124 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 MZT2BQ6NZ67 158 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 LINC00305Q7Z4B0 112 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 BPIFA4PQ86YQ2 179 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 RNF182Q8N6D2 247 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 ZNF738Q8NE65 137 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 OR8A1Q8NGG7 326 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 CHAC2Q8WUX2 184 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 TMEM37Q8WXS4 190 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 MGST2Q99735 147 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 SLC50A1Q9BRV3 221 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 DNAJC4Q9NNZ3 241 aa7.45□□□□□ -1.22
CPSF1-203ENST00000527916 ZNF331Q9NQX6 463 aaPredicted RBP7.45□□□□□ -1.22
CPSF1-203ENST00000527916 LSM5Q9Y4Y9 91 aaKnown RBP7.45□□□□□ -1.22
CPSF1-203ENST00000527916 FAM24AA6NFZ4 105 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 EPM2AB3EWF7 344 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 INSP01308 110 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 TSPOP30536 169 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 S100A11P31949 105 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 CAMLGP49069 296 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 BCAP31P51572 246 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 EMP1P54849 157 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 SPINK13Q1W4C9 94 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 LCN15Q6UWW0 184 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 Q6ZRG5 221 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 TMEM256Q8N2U0 113 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 C6orf223Q8N319 242 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 LRRC20Q8TCA0 184 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 TMEM208Q9BTX3 173 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 LYRM2Q9NU23 88 aaPredicted RBP7.44□□□□□ -1.22
CPSF1-203ENST00000527916 WDR83OSQ9Y284 106 aa7.44□□□□□ -1.22
CPSF1-203ENST00000527916 YTHDF2Q9Y5A9 579 aaKnown RBP7.44□□□□□ -1.22
CPSF1-203ENST00000527916 LYRM9A8MSI8 78 aa7.43□□□□□ -1.22
CPSF1-203ENST00000527916 BOLA2-SMG1P6H3BVE0 249 aa7.43□□□□□ -1.22
CPSF1-203ENST00000527916 M0R2Z0 102 aa7.43□□□□□ -1.22
CPSF1-203ENST00000527916 COX7A2P2O60397 106 aa7.43□□□□□ -1.22
CPSF1-203ENST00000527916 RPL29P47914 159 aaKnown RBP7.43□□□□□ -1.22
CPSF1-203ENST00000527916 SULT1A1P50225 295 aa7.43□□□□□ -1.22
CPSF1-203ENST00000527916 CAV2P51636 162 aa7.43□□□□□ -1.22
CPSF1-203ENST00000527916 GUK1Q16774 197 aa7.43□□□□□ -1.22
CPSF1-203ENST00000527916 ATP6V1FQ16864 119 aa7.43□□□□□ -1.22
CPSF1-203ENST00000527916 C10orf113Q5VZT2 155 aa7.43□□□□□ -1.22
CPSF1-203ENST00000527916 NRARPQ7Z6K4 114 aa7.43□□□□□ -1.22
CPSF1-203ENST00000527916 TMEM252Q8N6L7 170 aa7.43□□□□□ -1.22
CPSF1-203ENST00000527916 OR1L4Q8NGR5 311 aa7.43□□□□□ -1.22
CPSF1-203ENST00000527916 ATG101Q9BSB4 218 aa7.43□□□□□ -1.22
CPSF1-203ENST00000527916 UQCC1Q9NVA1 299 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 340.3 ms