RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 ZNF98A6NK75 572 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 C9JCJ5 164 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 PPP1R2P9O14990 202 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 NDUFB4O95168 129 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 SLC25A5P05141 298 aaKnown RBP6.53□□□□□ -1.36
VAPB-206ENST00000520497 PYYP10082 97 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 CD28P10747 220 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 GP9P14770 177 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 NPPCP23582 126 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 GALR1P47211 349 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 UBE2G1P62253 170 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 SUMO1P63165 101 aaKnown RBP6.53□□□□□ -1.36
VAPB-206ENST00000520497 PDE6HQ13956 83 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 C1orf194Q5T5A4 169 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 C18orf65Q6ZTR6 163 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 C5orf17Q8NAS9 161 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 BLNKQ8WV28 456 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 ZNF503Q96F45 646 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 OR5B12Q96R08 314 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 C20orf24Q9BUV8 137 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 ELOVL1Q9BW60 279 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 CTDSP1Q9GZU7 261 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 SDF2L1Q9HCN8 221 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 BIN3Q9NQY0 253 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 OTORQ9NRC9 128 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 ANK2Q01484 3957 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 IGHV4OR15-8A0A075B7B6 117 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 A0A087WW49 117 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 HELTA6NFD8 242 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 SCO1O75880 301 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 S100PP25815 95 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 CRYBB3P26998 211 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 CSN1S1P47710 185 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 GNG4P50150 75 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 TAS2R60P59551 318 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 KRTAP10-3P60369 221 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 FAM106AQ4KMX7 169 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 UNQ9165/PRO28630Q6UXU0 137 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 GPHB5Q86YW7 130 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.52□□□□□ -1.37
VAPB-206ENST00000520497 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.52□□□□□ -1.37
VAPB-206ENST00000520497 ANAPC16Q96DE5 110 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 TSSC4Q9Y5U2 329 aaPredicted RBP6.52□□□□□ -1.37
VAPB-206ENST00000520497 LY96Q9Y6Y9 160 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 U3KQE9 123 aa6.52□□□□□ -1.37
VAPB-206ENST00000520497 IGHV3OR16-8A0A075B7F1 116 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 SERTM2A0A1B0GWG4 89 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 CXorf65A6NEN9 183 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 FBLL1A6NHQ2 334 aaKnown RBP6.51□□□□□ -1.37
VAPB-206ENST00000520497 ZNF785A8K8V0 405 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 ADARB2-AS1A8MUL3 147 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 A8MWP6 167 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 GGTLC3B5MD39 225 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 PEX7O00628 323 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 MRPS12O15235 138 aaKnown RBP6.51□□□□□ -1.37
VAPB-206ENST00000520497 ZNF253O75346 499 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 RANP62826 216 aaKnown RBP6.51□□□□□ -1.37
VAPB-206ENST00000520497 FOXL1Q12952 345 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 FHL3Q13643 280 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 RPEL1Q2QD12 228 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 DEFB136Q30KP8 78 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 LEMD1Q68G75 181 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 HIST2H2BDQ6DRA6 164 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 REC114Q7Z4M0 266 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 ARL6IP6Q8N6S5 226 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 C15orf54Q8N8G6 183 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 KLHL30-AS1Q8NEE0 82 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 SMIM12Q96EX1 92 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 FMC1Q96HJ9 113 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 BTF3L4Q96K17 158 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 CITED2Q99967 270 aaPredicted RBP6.51□□□□□ -1.37
VAPB-206ENST00000520497 SLC50A1Q9BRV3 221 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 ATG101Q9BSB4 218 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 Q9H3A6 140 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 TUBA4BQ9H853 241 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 TMEM242Q9NWH2 141 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 CLEC5AQ9NY25 188 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 UFC1Q9Y3C8 167 aa6.51□□□□□ -1.37
VAPB-206ENST00000520497 TRBV19A0A075B6N1 114 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 PGPA6NDG6 321 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 LINC01619G3V211 115 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 H7BYZ3 331 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 K7EMT4 169 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 LGALS9O00182 355 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 TSPAN4O14817 238 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 BUB3O43684 328 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 HOXD3P31249 432 aaPredicted RBP6.5□□□□□ -1.37
VAPB-206ENST00000520497 RPL35P42766 123 aaKnown RBP6.5□□□□□ -1.37
VAPB-206ENST00000520497 RPL23P62829 140 aaKnown RBP6.5□□□□□ -1.37
VAPB-206ENST00000520497 RPL19P84098 196 aaKnown RBP6.5□□□□□ -1.37
VAPB-206ENST00000520497 KHDC1LQ5JSQ8 128 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 SAMD13Q5VXD3 122 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 KCNIP4Q6PIL6 250 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 ATRAIDQ6UW56 229 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 C8orf86Q6ZUL3 223 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 C11orf44Q8N8P7 122 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 OR11H1Q8NG94 326 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 RAX2Q96IS3 184 aa6.5□□□□□ -1.37
VAPB-206ENST00000520497 DAZ1Q9NQZ3 744 aaKnown RBP6.5□□□□□ -1.37
VAPB-206ENST00000520497 EPDR1Q9UM22 224 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms