RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	ZNF738	Q8NE65	137 aa		10.25	□□□□□ -0.77
CCHCR1-222	ENST00000507459	OR1L4	Q8NGR5	311 aa		10.25	□□□□□ -0.77
CCHCR1-222	ENST00000507459	SLC39A9	Q9NUM3	307 aa		10.25	□□□□□ -0.77
CCHCR1-222	ENST00000507459	PXMP4	Q9Y6I8	212 aa		10.25	□□□□□ -0.77
CCHCR1-222	ENST00000507459	PLEC	Q15149	4684 aa	Known RBP	10.24	□□□□□ -0.77
CCHCR1-222	ENST00000507459		A0A087X0K7	114 aa		10.24	□□□□□ -0.77
CCHCR1-222	ENST00000507459	TRAV5	A0A0B4J249	113 aa		10.24	□□□□□ -0.77
CCHCR1-222	ENST00000507459		H3BTX0	84 aa		10.24	□□□□□ -0.77
CCHCR1-222	ENST00000507459	MRPS12	O15235	138 aa	Known RBP	10.24	□□□□□ -0.77
CCHCR1-222	ENST00000507459	JTB	O76095	146 aa		10.24	□□□□□ -0.77
CCHCR1-222	ENST00000507459	RPL29	P47914	159 aa	Known RBP	10.24	□□□□□ -0.77
CCHCR1-222	ENST00000507459	BPIFA4P	Q86YQ2	179 aa		10.24	□□□□□ -0.77
CCHCR1-222	ENST00000507459	ZNF709	Q8N972	641 aa		10.24	□□□□□ -0.77
CCHCR1-222	ENST00000507459	THAP6	Q8TBB0	222 aa		10.24	□□□□□ -0.77
CCHCR1-222	ENST00000507459	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.24	□□□□□ -0.77
CCHCR1-222	ENST00000507459	PFDN5	Q99471	154 aa		10.24	□□□□□ -0.77
CCHCR1-222	ENST00000507459	RNF126	Q9BV68	326 aa		10.24	□□□□□ -0.77
CCHCR1-222	ENST00000507459	ALG5	Q9Y673	324 aa		10.24	□□□□□ -0.77
CCHCR1-222	ENST00000507459	DUSP14	O95147	198 aa	Known RBP	10.23	□□□□□ -0.77
CCHCR1-222	ENST00000507459	MPC2	O95563	127 aa		10.23	□□□□□ -0.77
CCHCR1-222	ENST00000507459	CXCL3	P19876	107 aa		10.23	□□□□□ -0.77
CCHCR1-222	ENST00000507459	CNN1	P51911	297 aa	Known RBP	10.23	□□□□□ -0.77
CCHCR1-222	ENST00000507459	CLUHP3	Q96NS8	147 aa		10.23	□□□□□ -0.77
CCHCR1-222	ENST00000507459	NPCDR1	Q9BY65	106 aa		10.23	□□□□□ -0.77
CCHCR1-222	ENST00000507459	MFF	Q9GZY8	342 aa		10.23	□□□□□ -0.77
CCHCR1-222	ENST00000507459	KLK5	Q9Y337	293 aa	Predicted RBP	10.23	□□□□□ -0.77
CCHCR1-222	ENST00000507459	MPDU1	O75352	247 aa		10.22	□□□□□ -0.77
CCHCR1-222	ENST00000507459	PTTG1	O95997	202 aa		10.22	□□□□□ -0.77
CCHCR1-222	ENST00000507459	PSG3	Q16557	428 aa		10.22	□□□□□ -0.77
CCHCR1-222	ENST00000507459	LCN15	Q6UWW0	184 aa		10.22	□□□□□ -0.77
CCHCR1-222	ENST00000507459	PET100	P0DJ07	73 aa		10.21	□□□□□ -0.77
CCHCR1-222	ENST00000507459	RHOB	P62745	196 aa		10.21	□□□□□ -0.77
CCHCR1-222	ENST00000507459	HIST1H1A	Q02539	215 aa	Predicted RBP	10.21	□□□□□ -0.77
CCHCR1-222	ENST00000507459	SPINK13	Q1W4C9	94 aa		10.21	□□□□□ -0.77
CCHCR1-222	ENST00000507459	GCSAML	Q5JQS6	135 aa		10.21	□□□□□ -0.77
CCHCR1-222	ENST00000507459	ZNF705A	Q6ZN79	300 aa	Predicted RBP	10.21	□□□□□ -0.77
CCHCR1-222	ENST00000507459	CHAC2	Q8WUX2	184 aa		10.21	□□□□□ -0.77
CCHCR1-222	ENST00000507459	SLC50A1	Q9BRV3	221 aa		10.21	□□□□□ -0.77
CCHCR1-222	ENST00000507459	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.21	□□□□□ -0.77
CCHCR1-222	ENST00000507459	MBD2	Q9UBB5	411 aa		10.21	□□□□□ -0.77
CCHCR1-222	ENST00000507459	RYR2	Q92736	4967 aa		10.21	□□□□□ -0.78
CCHCR1-222	ENST00000507459	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459		H3BQ15	152 aa		10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459		M0R2Z0	102 aa		10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459	SLC17A3	O00476	420 aa		10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459	IGLC2	P0DOY2	106 aa		10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459	CXCL2	P19875	107 aa		10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459	EMP1	P54849	157 aa		10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459	AMTN	Q6UX39	209 aa		10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459	OR11H7	Q8NGC8	314 aa		10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459	OR8A1	Q8NGG7	326 aa		10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459	RPUSD4	Q96CM3	377 aa	Known RBP	10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459	SMIM3	Q9BZL3	60 aa		10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459	HRH4	Q9H3N8	390 aa		10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459	PPP1R14D	Q9NXH3	145 aa		10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459	GOLT1B	Q9Y3E0	138 aa		10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459	HSPB11	Q9Y547	144 aa		10.2	□□□□□ -0.78
CCHCR1-222	ENST00000507459	LYST	Q99698	3801 aa		10.19	□□□□□ -0.78
CCHCR1-222	ENST00000507459		A8MTW9	85 aa		10.19	□□□□□ -0.78
CCHCR1-222	ENST00000507459	RPL12	P30050	165 aa	Known RBP	10.19	□□□□□ -0.78
CCHCR1-222	ENST00000507459	ZNF767P	Q75MW2	155 aa		10.19	□□□□□ -0.78
CCHCR1-222	ENST00000507459	C1orf158	Q8N1D5	194 aa		10.19	□□□□□ -0.78
CCHCR1-222	ENST00000507459	ATP5S	Q99766	215 aa		10.19	□□□□□ -0.78
CCHCR1-222	ENST00000507459	TMEM208	Q9BTX3	173 aa		10.19	□□□□□ -0.78
CCHCR1-222	ENST00000507459	WDR61	Q9GZS3	305 aa	Known RBP	10.19	□□□□□ -0.78
CCHCR1-222	ENST00000507459	MED28	Q9H204	178 aa		10.19	□□□□□ -0.78
CCHCR1-222	ENST00000507459	CELA1	Q9UNI1	258 aa		10.19	□□□□□ -0.78
CCHCR1-222	ENST00000507459	TRAV12-2	A0A075B6T6	113 aa		10.18	□□□□□ -0.78
CCHCR1-222	ENST00000507459	FCN2	Q15485	313 aa		10.18	□□□□□ -0.78
CCHCR1-222	ENST00000507459	SAT2	Q96F10	170 aa	Predicted RBP	10.18	□□□□□ -0.78
CCHCR1-222	ENST00000507459	IGF2BP2-AS1	Q96M15	143 aa		10.18	□□□□□ -0.78
CCHCR1-222	ENST00000507459	NEU1	Q99519	415 aa		10.18	□□□□□ -0.78
CCHCR1-222	ENST00000507459	ZNF586	Q9NXT0	402 aa		10.18	□□□□□ -0.78
CCHCR1-222	ENST00000507459	SMIM9	A6NGZ8	99 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459	PRAC2	D3DTV9	90 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459	C17orf112	F2Z3M2	114 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459	BOLA2-SMG1P6	H3BVE0	249 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459	LY6G6C	O95867	125 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459	IFNA5	P01569	189 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459	HBE1	P02100	147 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459	AMBP	P02760	352 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459	PYY	P10082	97 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459	GUK1	Q16774	197 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459		Q6ZTC4	211 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459	BAP18	Q8IXM2	172 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459	SCGB1C1	Q8TD33	95 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459	C2CD4C	Q8TF44	421 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459	BLNK	Q8WV28	456 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459	RFNG	Q9Y644	331 aa		10.17	□□□□□ -0.78
CCHCR1-222	ENST00000507459	CRX	O43186	299 aa	Predicted RBP	10.16	□□□□□ -0.78
CCHCR1-222	ENST00000507459	INS	P01308	110 aa		10.16	□□□□□ -0.78
CCHCR1-222	ENST00000507459	RRN3P1	Q2M238	152 aa		10.16	□□□□□ -0.78
CCHCR1-222	ENST00000507459	C12orf74	Q32Q52	190 aa		10.16	□□□□□ -0.78
CCHCR1-222	ENST00000507459	MIR17HG	Q75NE6	70 aa		10.16	□□□□□ -0.78
CCHCR1-222	ENST00000507459	LINC00476	Q8WZB0	136 aa		10.16	□□□□□ -0.78
CCHCR1-222	ENST00000507459	KCNIP2	Q9NS61	270 aa		10.16	□□□□□ -0.78
CCHCR1-222	ENST00000507459	TIMM9	Q9Y5J7	89 aa		10.16	□□□□□ -0.78
CCHCR1-222	ENST00000507459	DNAH1	Q9P2D7	4330 aa		10.16	□□□□□ -0.78
CCHCR1-222	ENST00000507459	TRBV19	A0A075B6N1	114 aa		10.15	□□□□□ -0.78
CCHCR1-222	ENST00000507459	LOC102723971	A0A1B0GUV8	181 aa		10.15	□□□□□ -0.78

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