RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 TMEM37Q8WXS4 190 aa11.25□□□□□ -0.61
CLDND1-211ENST00000506575 PFDN5Q99471 154 aa11.25□□□□□ -0.61
CLDND1-211ENST00000506575 NEU1Q99519 415 aa11.25□□□□□ -0.61
CLDND1-211ENST00000506575 GOLT1BQ9Y3E0 138 aa11.25□□□□□ -0.61
CLDND1-211ENST00000506575 SMIM9A6NGZ8 99 aa11.24□□□□□ -0.61
CLDND1-211ENST00000506575 ZNF705FA8MVS1 300 aaPredicted RBP11.24□□□□□ -0.61
CLDND1-211ENST00000506575 MPDU1O75352 247 aa11.24□□□□□ -0.61
CLDND1-211ENST00000506575 AMBPP02760 352 aa11.24□□□□□ -0.61
CLDND1-211ENST00000506575 ZNF705DP0CH99 300 aaPredicted RBP11.24□□□□□ -0.61
CLDND1-211ENST00000506575 ZNF705BP0CI00 300 aaPredicted RBP11.24□□□□□ -0.61
CLDND1-211ENST00000506575 CXCL2P19875 107 aa11.24□□□□□ -0.61
CLDND1-211ENST00000506575 CXCL3P19876 107 aa11.24□□□□□ -0.61
CLDND1-211ENST00000506575 HLA-DMBP28068 263 aa11.24□□□□□ -0.61
CLDND1-211ENST00000506575 RPL29P47914 159 aaKnown RBP11.24□□□□□ -0.61
CLDND1-211ENST00000506575 CNN1P51911 297 aaKnown RBP11.24□□□□□ -0.61
CLDND1-211ENST00000506575 B2MP61769 119 aa11.24□□□□□ -0.61
CLDND1-211ENST00000506575 PRR20EP86478 221 aa11.24□□□□□ -0.61
CLDND1-211ENST00000506575 PRR20CP86479 221 aa11.24□□□□□ -0.61
CLDND1-211ENST00000506575 PRR20DP86480 221 aa11.24□□□□□ -0.61
CLDND1-211ENST00000506575 PRR20BP86481 221 aa11.24□□□□□ -0.61
CLDND1-211ENST00000506575 PRR20AP86496 221 aa11.24□□□□□ -0.61
CLDND1-211ENST00000506575 PSG3Q16557 428 aa11.24□□□□□ -0.61
CLDND1-211ENST00000506575 LCN15Q6UWW0 184 aa11.24□□□□□ -0.61
CLDND1-211ENST00000506575 C2CD4CQ8TF44 421 aa11.24□□□□□ -0.61
CLDND1-211ENST00000506575 HYDINQ4G0P3 5121 aa11.23□□□□□ -0.61
CLDND1-211ENST00000506575 TMEM189A5PLL7 270 aa11.23□□□□□ -0.61
CLDND1-211ENST00000506575 A8MTW9 85 aa11.23□□□□□ -0.61
CLDND1-211ENST00000506575 MRPS12O15235 138 aaKnown RBP11.23□□□□□ -0.61
CLDND1-211ENST00000506575 HIST1H1AQ02539 215 aaPredicted RBP11.23□□□□□ -0.61
CLDND1-211ENST00000506575 NHLH2Q02577 135 aa11.23□□□□□ -0.61
CLDND1-211ENST00000506575 OPCMLQ14982 345 aa11.23□□□□□ -0.61
CLDND1-211ENST00000506575 OR5C1Q8NGR4 320 aa11.23□□□□□ -0.61
CLDND1-211ENST00000506575 SLC50A1Q9BRV3 221 aa11.23□□□□□ -0.61
CLDND1-211ENST00000506575 TMEM208Q9BTX3 173 aa11.23□□□□□ -0.61
CLDND1-211ENST00000506575 SLC39A9Q9NUM3 307 aa11.23□□□□□ -0.61
CLDND1-211ENST00000506575 PPP1R14DQ9NXH3 145 aa11.23□□□□□ -0.61
CLDND1-211ENST00000506575 OR5AC2Q9NZP5 309 aa11.23□□□□□ -0.61
CLDND1-211ENST00000506575 RFNGQ9Y644 331 aa11.23□□□□□ -0.61
CLDND1-211ENST00000506575 PXMP4Q9Y6I8 212 aa11.23□□□□□ -0.61
CLDND1-211ENST00000506575 SNRPCP09234 159 aaKnown RBP11.22□□□□□ -0.61
CLDND1-211ENST00000506575 PET100P0DJ07 73 aa11.22□□□□□ -0.61
CLDND1-211ENST00000506575 H2BFSP57053 126 aa11.22□□□□□ -0.61
CLDND1-211ENST00000506575 RHOBP62745 196 aa11.22□□□□□ -0.61
CLDND1-211ENST00000506575 AMTNQ6UX39 209 aa11.22□□□□□ -0.61
CLDND1-211ENST00000506575 Q6ZTC4 211 aa11.22□□□□□ -0.61
CLDND1-211ENST00000506575 OR11H7Q8NGC8 314 aa11.22□□□□□ -0.61
CLDND1-211ENST00000506575 CHAC2Q8WUX2 184 aa11.22□□□□□ -0.61
CLDND1-211ENST00000506575 PPP1R1CQ8WVI7 109 aa11.22□□□□□ -0.61
CLDND1-211ENST00000506575 IGF2BP2-AS1Q96M15 143 aa11.22□□□□□ -0.61
CLDND1-211ENST00000506575 TRAV10A0A0B4J240 114 aa11.21□□□□□ -0.61
CLDND1-211ENST00000506575 INSP01308 110 aa11.21□□□□□ -0.61
CLDND1-211ENST00000506575 HBE1P02100 147 aa11.21□□□□□ -0.61
CLDND1-211ENST00000506575 EMP1P54849 157 aa11.21□□□□□ -0.61
CLDND1-211ENST00000506575 CLINT1Q14677 625 aa11.21□□□□□ -0.61
CLDND1-211ENST00000506575 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.61
CLDND1-211ENST00000506575 MORN5Q5VZ52 161 aa11.21□□□□□ -0.61
CLDND1-211ENST00000506575 OR8A1Q8NGG7 326 aa11.21□□□□□ -0.61
CLDND1-211ENST00000506575 RPUSD4Q96CM3 377 aaKnown RBP11.21□□□□□ -0.61
CLDND1-211ENST00000506575 NPCDR1Q9BY65 106 aa11.21□□□□□ -0.61
CLDND1-211ENST00000506575 ZNF331Q9NQX6 463 aaPredicted RBP11.21□□□□□ -0.61
CLDND1-211ENST00000506575 CELA1Q9UNI1 258 aa11.21□□□□□ -0.61
CLDND1-211ENST00000506575 TRAV5A0A0B4J249 113 aa11.2□□□□□ -0.62
CLDND1-211ENST00000506575 IGLL5B9A064 214 aa11.2□□□□□ -0.62
CLDND1-211ENST00000506575 H0YIZ8 118 aa11.2□□□□□ -0.62
CLDND1-211ENST00000506575 H3BTX0 84 aa11.2□□□□□ -0.62
CLDND1-211ENST00000506575 M0R2Z0 102 aa11.2□□□□□ -0.62
CLDND1-211ENST00000506575 TCTAP57738 103 aa11.2□□□□□ -0.62
CLDND1-211ENST00000506575 GUK1Q16774 197 aa11.2□□□□□ -0.62
CLDND1-211ENST00000506575 C1orf158Q8N1D5 194 aa11.2□□□□□ -0.62
CLDND1-211ENST00000506575 THAP6Q8TBB0 222 aa11.2□□□□□ -0.62
CLDND1-211ENST00000506575 TEX48A0A1B0GUV7 120 aa11.19□□□□□ -0.62
CLDND1-211ENST00000506575 LOC102723971A0A1B0GUV8 181 aa11.19□□□□□ -0.62
CLDND1-211ENST00000506575 BOLA2-SMG1P6H3BVE0 249 aa11.19□□□□□ -0.62
CLDND1-211ENST00000506575 MPC2O95563 127 aa11.19□□□□□ -0.62
CLDND1-211ENST00000506575 SPART-AS1P0CW21 52 aa11.19□□□□□ -0.62
CLDND1-211ENST00000506575 IGLC2P0DOY2 106 aa11.19□□□□□ -0.62
CLDND1-211ENST00000506575 RRN3P1Q2M238 152 aa11.19□□□□□ -0.62
CLDND1-211ENST00000506575 ZNF767PQ75MW2 155 aa11.19□□□□□ -0.62
CLDND1-211ENST00000506575 KCNIP2Q9NS61 270 aa11.19□□□□□ -0.62
CLDND1-211ENST00000506575 H3BQ15 152 aa11.18□□□□□ -0.62
CLDND1-211ENST00000506575 SLC17A3O00476 420 aa11.18□□□□□ -0.62
CLDND1-211ENST00000506575 C12orf74Q32Q52 190 aa11.18□□□□□ -0.62
CLDND1-211ENST00000506575 OR10J6PQ8NGY7 276 aa11.18□□□□□ -0.62
CLDND1-211ENST00000506575 DEFB131BA0A096LNP1 70 aa11.17□□□□□ -0.62
CLDND1-211ENST00000506575 C17orf112F2Z3M2 114 aa11.17□□□□□ -0.62
CLDND1-211ENST00000506575 PTTG1O95997 202 aa11.17□□□□□ -0.62
CLDND1-211ENST00000506575 PRB4P10163 310 aaPredicted RBP11.17□□□□□ -0.62
CLDND1-211ENST00000506575 LGALS9CQ6DKI2 356 aa11.17□□□□□ -0.62
CLDND1-211ENST00000506575 BAP18Q8IXM2 172 aa11.17□□□□□ -0.62
CLDND1-211ENST00000506575 RNF126Q9BV68 326 aa11.17□□□□□ -0.62
CLDND1-211ENST00000506575 TRAV12-2A0A075B6T6 113 aa11.16□□□□□ -0.62
CLDND1-211ENST00000506575 CRXO43186 299 aaPredicted RBP11.16□□□□□ -0.62
CLDND1-211ENST00000506575 RPL12P30050 165 aaKnown RBP11.16□□□□□ -0.62
CLDND1-211ENST00000506575 GCSAMLQ5JQS6 135 aa11.16□□□□□ -0.62
CLDND1-211ENST00000506575 FAM222AQ5U5X8 452 aa11.16□□□□□ -0.62
CLDND1-211ENST00000506575 SAT2Q96F10 170 aaPredicted RBP11.16□□□□□ -0.62
CLDND1-211ENST00000506575 ATP5SQ99766 215 aa11.16□□□□□ -0.62
CLDND1-211ENST00000506575 WDR61Q9GZS3 305 aaKnown RBP11.16□□□□□ -0.62
CLDND1-211ENST00000506575 ZNF586Q9NXT0 402 aa11.16□□□□□ -0.62
CLDND1-211ENST00000506575 TMEM14CQ9P0S9 112 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms