RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 NRARPQ7Z6K4 114 aa12.57□□□□□ -0.4
SEC13-218ENST00000490283 OR1L4Q8NGR5 311 aa12.57□□□□□ -0.4
SEC13-218ENST00000490283 CELA1Q9UNI1 258 aa12.57□□□□□ -0.4
SEC13-218ENST00000490283 UBE2L5PA0A1B0GUS4 154 aa12.56□□□□□ -0.4
SEC13-218ENST00000490283 PSG3Q16557 428 aa12.56□□□□□ -0.4
SEC13-218ENST00000490283 ATP6V1FQ16864 119 aa12.56□□□□□ -0.4
SEC13-218ENST00000490283 TMEM252Q8N6L7 170 aa12.56□□□□□ -0.4
SEC13-218ENST00000490283 IGF2BP2-AS1Q96M15 143 aa12.56□□□□□ -0.4
SEC13-218ENST00000490283 PFDN5Q99471 154 aa12.56□□□□□ -0.4
SEC13-218ENST00000490283 SLC50A1Q9BRV3 221 aa12.56□□□□□ -0.4
SEC13-218ENST00000490283 C11orf1Q9H5F2 150 aa12.56□□□□□ -0.4
SEC13-218ENST00000490283 WDR83OSQ9Y284 106 aa12.56□□□□□ -0.4
SEC13-218ENST00000490283 IGSF23A1L1A6 192 aa12.55□□□□□ -0.4
SEC13-218ENST00000490283 A8MTW9 85 aa12.55□□□□□ -0.4
SEC13-218ENST00000490283 INMT-MINDY4F8WBC2 141 aa12.55□□□□□ -0.4
SEC13-218ENST00000490283 INSP01308 110 aa12.55□□□□□ -0.4
SEC13-218ENST00000490283 CXCL3P19876 107 aa12.55□□□□□ -0.4
SEC13-218ENST00000490283 RHOBP62745 196 aa12.55□□□□□ -0.4
SEC13-218ENST00000490283 HIST1H1AQ02539 215 aaPredicted RBP12.55□□□□□ -0.4
SEC13-218ENST00000490283 IL15RAQ13261 267 aa12.55□□□□□ -0.4
SEC13-218ENST00000490283 RRN3P1Q2M238 152 aa12.55□□□□□ -0.4
SEC13-218ENST00000490283 OR11H7Q8NGC8 314 aa12.55□□□□□ -0.4
SEC13-218ENST00000490283 DNAJC4Q9NNZ3 241 aa12.55□□□□□ -0.4
SEC13-218ENST00000490283 DEFB131BA0A096LNP1 70 aa12.54□□□□□ -0.4
SEC13-218ENST00000490283 CYCSP99999 105 aaKnown RBP12.54□□□□□ -0.4
SEC13-218ENST00000490283 SPINK13Q1W4C9 94 aa12.54□□□□□ -0.4
SEC13-218ENST00000490283 VWC2Q2TAL6 325 aa12.54□□□□□ -0.4
SEC13-218ENST00000490283 C12orf74Q32Q52 190 aa12.54□□□□□ -0.4
SEC13-218ENST00000490283 MIC13Q5XKP0 118 aa12.54□□□□□ -0.4
SEC13-218ENST00000490283 AMTNQ6UX39 209 aa12.54□□□□□ -0.4
SEC13-218ENST00000490283 SLC25A31Q9H0C2 315 aa12.54□□□□□ -0.4
SEC13-218ENST00000490283 BATF3Q9NR55 127 aa12.54□□□□□ -0.4
SEC13-218ENST00000490283 LOC102723971A0A1B0GUV8 181 aa12.53□□□□□ -0.4
SEC13-218ENST00000490283 BOLA2-SMG1P6H3BVE0 249 aa12.53□□□□□ -0.4
SEC13-218ENST00000490283 FGF7P21781 194 aa12.53□□□□□ -0.4
SEC13-218ENST00000490283 RPL29P47914 159 aaKnown RBP12.53□□□□□ -0.4
SEC13-218ENST00000490283 B2MP61769 119 aa12.53□□□□□ -0.4
SEC13-218ENST00000490283 ZNF767PQ75MW2 155 aa12.53□□□□□ -0.4
SEC13-218ENST00000490283 C1orf158Q8N1D5 194 aa12.53□□□□□ -0.4
SEC13-218ENST00000490283 OR8A1Q8NGG7 326 aa12.53□□□□□ -0.4
SEC13-218ENST00000490283 TMEM37Q8WXS4 190 aa12.53□□□□□ -0.4
SEC13-218ENST00000490283 RPUSD4Q96CM3 377 aaKnown RBP12.53□□□□□ -0.4
SEC13-218ENST00000490283 RNF126Q9BV68 326 aa12.53□□□□□ -0.4
SEC13-218ENST00000490283 NMES1Q9C002 83 aa12.53□□□□□ -0.4
SEC13-218ENST00000490283 IGHV4-4A0A075B6R2 117 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 E5RGE8 158 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 M0R2Z0 102 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 MRPS12O15235 138 aaKnown RBP12.52□□□□□ -0.41
SEC13-218ENST00000490283 MPDU1O75352 247 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 SIX6O95475 246 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 PRR20EP86478 221 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 PRR20CP86479 221 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 PRR20DP86480 221 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 PRR20BP86481 221 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 PRR20AP86496 221 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 IFITM3Q01628 133 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 OPCMLQ14982 345 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 LRRC37A5PQ49AS3 106 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 ZNF331Q9NQX6 463 aaPredicted RBP12.52□□□□□ -0.41
SEC13-218ENST00000490283 SLC39A9Q9NUM3 307 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 APLNQ9ULZ1 77 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 PXMP4Q9Y6I8 212 aa12.52□□□□□ -0.41
SEC13-218ENST00000490283 PLECQ15149 4684 aaKnown RBP12.51□□□□□ -0.41
SEC13-218ENST00000490283 SSNA1O43805 119 aa12.51□□□□□ -0.41
SEC13-218ENST00000490283 GUK1Q16774 197 aa12.51□□□□□ -0.41
SEC13-218ENST00000490283 NIPSNAP3BQ9BS92 247 aa12.51□□□□□ -0.41
SEC13-218ENST00000490283 SNRPCP09234 159 aaKnown RBP12.5□□□□□ -0.41
SEC13-218ENST00000490283 PET100P0DJ07 73 aa12.5□□□□□ -0.41
SEC13-218ENST00000490283 FAM222AQ5U5X8 452 aa12.5□□□□□ -0.41
SEC13-218ENST00000490283 BAP18Q8IXM2 172 aa12.5□□□□□ -0.41
SEC13-218ENST00000490283 OR10J6PQ8NGY7 276 aa12.5□□□□□ -0.41
SEC13-218ENST00000490283 CHAC2Q8WUX2 184 aa12.5□□□□□ -0.41
SEC13-218ENST00000490283 MARVELD1Q9BSK0 173 aa12.5□□□□□ -0.41
SEC13-218ENST00000490283 NDUFAF3Q9BU61 184 aa12.5□□□□□ -0.41
SEC13-218ENST00000490283 DKK2Q9UBU2 259 aa12.5□□□□□ -0.41
SEC13-218ENST00000490283 YTHDF2Q9Y5A9 579 aaKnown RBP12.5□□□□□ -0.41
SEC13-218ENST00000490283 MORN5Q5VZ52 161 aa12.49□□□□□ -0.41
SEC13-218ENST00000490283 TMEM256Q8N2U0 113 aa12.49□□□□□ -0.41
SEC13-218ENST00000490283 RPP25LQ8N5L8 163 aaKnown RBP12.49□□□□□ -0.41
SEC13-218ENST00000490283 OR5C1Q8NGR4 320 aa12.49□□□□□ -0.41
SEC13-218ENST00000490283 KCNIP2Q9NS61 270 aa12.49□□□□□ -0.41
SEC13-218ENST00000490283 HYDINQ4G0P3 5121 aa12.48□□□□□ -0.41
SEC13-218ENST00000490283 TRAV12-2A0A075B6T6 113 aa12.48□□□□□ -0.41
SEC13-218ENST00000490283 H3BTX0 84 aa12.48□□□□□ -0.41
SEC13-218ENST00000490283 IGLC2P0DOY2 106 aa12.48□□□□□ -0.41
SEC13-218ENST00000490283 TSPOP30536 169 aa12.48□□□□□ -0.41
SEC13-218ENST00000490283 CDKN1BP46527 198 aa12.48□□□□□ -0.41
SEC13-218ENST00000490283 DAD1P61803 113 aa12.48□□□□□ -0.41
SEC13-218ENST00000490283 NHLH2Q02577 135 aa12.48□□□□□ -0.41
SEC13-218ENST00000490283 NPCDR1Q9BY65 106 aa12.48□□□□□ -0.41
SEC13-218ENST00000490283 TRAV5A0A0B4J249 113 aa12.47□□□□□ -0.41
SEC13-218ENST00000490283 ZNF705GA8MUZ8 300 aaPredicted RBP12.47□□□□□ -0.41
SEC13-218ENST00000490283 SLC17A3O00476 420 aa12.47□□□□□ -0.41
SEC13-218ENST00000490283 CRXO43186 299 aaPredicted RBP12.47□□□□□ -0.41
SEC13-218ENST00000490283 CLINT1Q14677 625 aa12.47□□□□□ -0.41
SEC13-218ENST00000490283 OXA1LQ15070 435 aa12.47□□□□□ -0.41
SEC13-218ENST00000490283 THAP6Q8TBB0 222 aa12.47□□□□□ -0.41
SEC13-218ENST00000490283 LINC01587Q99440 93 aa12.47□□□□□ -0.41
SEC13-218ENST00000490283 OR5AC2Q9NZP5 309 aa12.47□□□□□ -0.41
SEC13-218ENST00000490283 H3BQ15 152 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms