RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SPATA31B1PQ5VZV4 182 aa8.86□□□□□ -0.99
MSH5-216ENST00000484309 LINC00476Q8WZB0 136 aa8.86□□□□□ -0.99
MSH5-216ENST00000484309 NMES1Q9C002 83 aa8.86□□□□□ -0.99
MSH5-216ENST00000484309 A0A087X0K7 114 aa8.85□□□□□ -0.99
MSH5-216ENST00000484309 RLN2P04090 185 aa8.85□□□□□ -0.99
MSH5-216ENST00000484309 CXCL3P19876 107 aa8.85□□□□□ -0.99
MSH5-216ENST00000484309 EMP1P54849 157 aa8.85□□□□□ -0.99
MSH5-216ENST00000484309 PRR20EP86478 221 aa8.85□□□□□ -0.99
MSH5-216ENST00000484309 PRR20CP86479 221 aa8.85□□□□□ -0.99
MSH5-216ENST00000484309 PRR20DP86480 221 aa8.85□□□□□ -0.99
MSH5-216ENST00000484309 PRR20BP86481 221 aa8.85□□□□□ -0.99
MSH5-216ENST00000484309 PRR20AP86496 221 aa8.85□□□□□ -0.99
MSH5-216ENST00000484309 HIST1H1AQ02539 215 aaPredicted RBP8.85□□□□□ -0.99
MSH5-216ENST00000484309 SPINK13Q1W4C9 94 aa8.85□□□□□ -0.99
MSH5-216ENST00000484309 AMTNQ6UX39 209 aa8.85□□□□□ -0.99
MSH5-216ENST00000484309 ZNF705AQ6ZN79 300 aaPredicted RBP8.85□□□□□ -0.99
MSH5-216ENST00000484309 Q6ZRG5 221 aa8.85□□□□□ -0.99
MSH5-216ENST00000484309 S100A7AQ86SG5 101 aa8.85□□□□□ -0.99
MSH5-216ENST00000484309 OR5C1Q8NGR4 320 aa8.85□□□□□ -0.99
MSH5-216ENST00000484309 THAP6Q8TBB0 222 aa8.85□□□□□ -0.99
MSH5-216ENST00000484309 ZNF705FA8MVS1 300 aaPredicted RBP8.84□□□□□ -0.99
MSH5-216ENST00000484309 E5RGE8 158 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 M0R2Z0 102 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 SLC17A3O00476 420 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 B2MP61769 119 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 CLINT1Q14677 625 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 PSG3Q16557 428 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 ATP6V1FQ16864 119 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 Q6ZTC4 211 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 BPIFA4PQ86YQ2 179 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 C1orf158Q8N1D5 194 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 OR11H7Q8NGC8 314 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 PPP1R1CQ8WVI7 109 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 CLUHP3Q96NS8 147 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 DNAJC4Q9NNZ3 241 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 SLC39A9Q9NUM3 307 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 PXMP4Q9Y6I8 212 aa8.84□□□□□ -0.99
MSH5-216ENST00000484309 A8MTW9 85 aa8.83□□□□□ -1
MSH5-216ENST00000484309 DUSP14O95147 198 aaKnown RBP8.83□□□□□ -1
MSH5-216ENST00000484309 RPL29P47914 159 aaKnown RBP8.83□□□□□ -1
MSH5-216ENST00000484309 CYCSP99999 105 aaKnown RBP8.83□□□□□ -1
MSH5-216ENST00000484309 GCSAMLQ5JQS6 135 aa8.83□□□□□ -1
MSH5-216ENST00000484309 LCN15Q6UWW0 184 aa8.83□□□□□ -1
MSH5-216ENST00000484309 BAP18Q8IXM2 172 aa8.83□□□□□ -1
MSH5-216ENST00000484309 OR8A1Q8NGG7 326 aa8.83□□□□□ -1
MSH5-216ENST00000484309 OR1L4Q8NGR5 311 aa8.83□□□□□ -1
MSH5-216ENST00000484309 NPCDR1Q9BY65 106 aa8.83□□□□□ -1
MSH5-216ENST00000484309 SLC25A31Q9H0C2 315 aa8.83□□□□□ -1
MSH5-216ENST00000484309 HRH4Q9H3N8 390 aa8.83□□□□□ -1
MSH5-216ENST00000484309 GOLT1BQ9Y3E0 138 aa8.83□□□□□ -1
MSH5-216ENST00000484309 TRAV12-2A0A075B6T6 113 aa8.82□□□□□ -1
MSH5-216ENST00000484309 H3BQ15 152 aa8.82□□□□□ -1
MSH5-216ENST00000484309 RHOBP62745 196 aa8.82□□□□□ -1
MSH5-216ENST00000484309 C12orf74Q32Q52 190 aa8.82□□□□□ -1
MSH5-216ENST00000484309 C2CD4CQ8TF44 421 aa8.82□□□□□ -1
MSH5-216ENST00000484309 RPUSD4Q96CM3 377 aaKnown RBP8.82□□□□□ -1
MSH5-216ENST00000484309 PFDN5Q99471 154 aa8.82□□□□□ -1
MSH5-216ENST00000484309 NEU1Q99519 415 aa8.82□□□□□ -1
MSH5-216ENST00000484309 SLC50A1Q9BRV3 221 aa8.82□□□□□ -1
MSH5-216ENST00000484309 TMEM208Q9BTX3 173 aa8.82□□□□□ -1
MSH5-216ENST00000484309 ZNF331Q9NQX6 463 aaPredicted RBP8.82□□□□□ -1
MSH5-216ENST00000484309 RNF24Q9Y225 148 aa8.82□□□□□ -1
MSH5-216ENST00000484309 ALG5Q9Y673 324 aa8.82□□□□□ -1
MSH5-216ENST00000484309 IGLL5B9A064 214 aa8.81□□□□□ -1
MSH5-216ENST00000484309 PRAC2D3DTV9 90 aa8.81□□□□□ -1
MSH5-216ENST00000484309 BOLA2-SMG1P6H3BVE0 249 aa8.81□□□□□ -1
MSH5-216ENST00000484309 CRXO43186 299 aaPredicted RBP8.81□□□□□ -1
MSH5-216ENST00000484309 MPC2O95563 127 aa8.81□□□□□ -1
MSH5-216ENST00000484309 INSP01308 110 aa8.81□□□□□ -1
MSH5-216ENST00000484309 PRM2P04554 102 aa8.81□□□□□ -1
MSH5-216ENST00000484309 IGLC2P0DOY2 106 aa8.81□□□□□ -1
MSH5-216ENST00000484309 CXCL2P19875 107 aa8.81□□□□□ -1
MSH5-216ENST00000484309 IGF2BP2-AS1Q96M15 143 aa8.81□□□□□ -1
MSH5-216ENST00000484309 RNF126Q9BV68 326 aa8.81□□□□□ -1
MSH5-216ENST00000484309 PARD6GQ9BYG4 376 aaPredicted RBP8.81□□□□□ -1
MSH5-216ENST00000484309 SMIM3Q9BZL3 60 aa8.81□□□□□ -1
MSH5-216ENST00000484309 PPP1R14DQ9NXH3 145 aa8.81□□□□□ -1
MSH5-216ENST00000484309 RFNGQ9Y644 331 aa8.81□□□□□ -1
MSH5-216ENST00000484309 TRAV10A0A0B4J240 114 aa8.8□□□□□ -1
MSH5-216ENST00000484309 LOC102723971A0A1B0GUV8 181 aa8.8□□□□□ -1
MSH5-216ENST00000484309 SMIM9A6NGZ8 99 aa8.8□□□□□ -1
MSH5-216ENST00000484309 C11orf94C9JXX5 98 aa8.8□□□□□ -1
MSH5-216ENST00000484309 MPDU1O75352 247 aa8.8□□□□□ -1
MSH5-216ENST00000484309 HBE1P02100 147 aa8.8□□□□□ -1
MSH5-216ENST00000484309 PYYP10082 97 aa8.8□□□□□ -1
MSH5-216ENST00000484309 ZNF586Q9NXT0 402 aa8.8□□□□□ -1
MSH5-216ENST00000484309 PLA2G2EQ9NZK7 142 aa8.8□□□□□ -1
MSH5-216ENST00000484309 MBD2Q9UBB5 411 aa8.8□□□□□ -1
MSH5-216ENST00000484309 ZNF705GA8MUZ8 300 aaPredicted RBP8.79□□□□□ -1
MSH5-216ENST00000484309 RRN3P1Q2M238 152 aa8.79□□□□□ -1
MSH5-216ENST00000484309 FAM222AQ5U5X8 452 aa8.79□□□□□ -1
MSH5-216ENST00000484309 CHAC2Q8WUX2 184 aa8.79□□□□□ -1
MSH5-216ENST00000484309 SAT2Q96F10 170 aaPredicted RBP8.79□□□□□ -1
MSH5-216ENST00000484309 ATP5SQ99766 215 aa8.79□□□□□ -1
MSH5-216ENST00000484309 WDR61Q9GZS3 305 aaKnown RBP8.79□□□□□ -1
MSH5-216ENST00000484309 HSPB11Q9Y547 144 aa8.79□□□□□ -1
MSH5-216ENST00000484309 YTHDF2Q9Y5A9 579 aaKnown RBP8.79□□□□□ -1
MSH5-216ENST00000484309 IGHV4-4A0A075B6R2 117 aa8.78□□□□□ -1
MSH5-216ENST00000484309 DEFB131BA0A096LNP1 70 aa8.78□□□□□ -1
MSH5-216ENST00000484309 TMEM189A5PLL7 270 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms