RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 TSC22D2O75157 780 aa6.72□□□□□ -1.33
MCF2L-223ENST00000473345 SCGB1D2O95969 90 aa6.72□□□□□ -1.33
MCF2L-223ENST00000473345 PSG1P11464 419 aa6.72□□□□□ -1.33
MCF2L-223ENST00000473345 PVALBP20472 110 aaPredicted RBP6.72□□□□□ -1.33
MCF2L-223ENST00000473345 RPL12P30050 165 aaKnown RBP6.72□□□□□ -1.33
MCF2L-223ENST00000473345 S100A11P31949 105 aa6.72□□□□□ -1.33
MCF2L-223ENST00000473345 HTR2BP41595 481 aa6.72□□□□□ -1.33
MCF2L-223ENST00000473345 YPEL3P61236 119 aaPredicted RBP6.72□□□□□ -1.33
MCF2L-223ENST00000473345 SAMD13Q5VXD3 122 aa6.72□□□□□ -1.33
MCF2L-223ENST00000473345 SPATA12Q7Z6I5 190 aa6.72□□□□□ -1.33
MCF2L-223ENST00000473345 C6orf223Q8N319 242 aa6.72□□□□□ -1.33
MCF2L-223ENST00000473345 OR1S2Q8NGQ3 325 aa6.72□□□□□ -1.33
MCF2L-223ENST00000473345 RNASEH2CQ8TDP1 164 aaKnown RBP6.72□□□□□ -1.33
MCF2L-223ENST00000473345 LINC00588Q9Y4M8 146 aa6.72□□□□□ -1.33
MCF2L-223ENST00000473345 HSPB11Q9Y547 144 aa6.72□□□□□ -1.33
MCF2L-223ENST00000473345 TEX48A0A1B0GUV7 120 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 SMIM9A6NGZ8 99 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 PMS2P5A8MQ11 134 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 A8MTW9 85 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 ZNF705GA8MUZ8 300 aaPredicted RBP6.71□□□□□ -1.34
MCF2L-223ENST00000473345 L7N2F9 121 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 WRBO00258 174 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 CRXO43186 299 aaPredicted RBP6.71□□□□□ -1.34
MCF2L-223ENST00000473345 SSSCA1O60232 199 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 TOMM40O96008 361 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 AZU1P20160 251 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 ATP5IP56385 69 aaPredicted RBP6.71□□□□□ -1.34
MCF2L-223ENST00000473345 SNRPD3P62318 126 aaKnown RBP6.71□□□□□ -1.34
MCF2L-223ENST00000473345 OPCMLQ14982 345 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 C2orf83Q53S99 150 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 FAM78BQ5VT40 261 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 ETFRF1Q6IPR1 90 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 TMEM14EPQ6UXP3 125 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 TMUB2Q71RG4 321 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 TMEM252Q8N6L7 170 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 INO80EQ8NBZ0 244 aaPredicted RBP6.71□□□□□ -1.34
MCF2L-223ENST00000473345 OR4B1Q8NGF8 309 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 DTD1Q8TEA8 209 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 Q8WTZ3 238 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 LINC00052Q96N35 136 aa6.71□□□□□ -1.34
MCF2L-223ENST00000473345 CIB3Q96Q77 187 aaPredicted RBP6.71□□□□□ -1.34
MCF2L-223ENST00000473345 A0A0J9YX75 114 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 IGSF23A1L1A6 192 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 TMEM189A5PLL7 270 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 FAM24AA6NFZ4 105 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 VAMP2P63027 116 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 IFITM2Q01629 132 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 NHLH2Q02577 135 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 ZNF90Q03938 601 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 SOHLH1Q5JUK2 328 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 FOXI2Q6ZQN5 318 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 ACY3Q96HD9 319 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 CLUHP3Q96NS8 147 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 SLC25A31Q9H0C2 315 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 ARL6Q9H0F7 186 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 CYTL1Q9NRR1 136 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 PSENENQ9NZ42 101 aa6.7□□□□□ -1.34
MCF2L-223ENST00000473345 PRSS46E5RG02 174 aa6.69□□□□□ -1.34
MCF2L-223ENST00000473345 TAAR5O14804 337 aa6.69□□□□□ -1.34
MCF2L-223ENST00000473345 BCL2L11O43521 198 aa6.69□□□□□ -1.34
MCF2L-223ENST00000473345 RD3LP0DJH9 198 aa6.69□□□□□ -1.34
MCF2L-223ENST00000473345 IAPPP10997 89 aa6.69□□□□□ -1.34
MCF2L-223ENST00000473345 SULT1A1P50225 295 aa6.69□□□□□ -1.34
MCF2L-223ENST00000473345 DAD1P61803 113 aa6.69□□□□□ -1.34
MCF2L-223ENST00000473345 PSG9Q00887 426 aa6.69□□□□□ -1.34
MCF2L-223ENST00000473345 BAXQ07812 192 aa6.69□□□□□ -1.34
MCF2L-223ENST00000473345 SPATA31B1PQ5VZV4 182 aa6.69□□□□□ -1.34
MCF2L-223ENST00000473345 IGFL4Q6B9Z1 124 aa6.69□□□□□ -1.34
MCF2L-223ENST00000473345 SLC51BQ86UW2 128 aa6.69□□□□□ -1.34
MCF2L-223ENST00000473345 SLC24A4Q8NFF2 622 aa6.69□□□□□ -1.34
MCF2L-223ENST00000473345 RNF125Q96EQ8 232 aa6.69□□□□□ -1.34
MCF2L-223ENST00000473345 U3KQ87 197 aa6.69□□□□□ -1.34
MCF2L-223ENST00000473345 IGKV1OR2-108A0A075B7D4 117 aa6.68□□□□□ -1.34
MCF2L-223ENST00000473345 CEBPZOSA8MTT3 80 aa6.68□□□□□ -1.34
MCF2L-223ENST00000473345 HBE1P02100 147 aa6.68□□□□□ -1.34
MCF2L-223ENST00000473345 FABP1P07148 127 aa6.68□□□□□ -1.34
MCF2L-223ENST00000473345 CAV2P51636 162 aa6.68□□□□□ -1.34
MCF2L-223ENST00000473345 ARL16Q0P5N6 197 aa6.68□□□□□ -1.34
MCF2L-223ENST00000473345 STOML3Q8TAV4 291 aa6.68□□□□□ -1.34
MCF2L-223ENST00000473345 RNF141Q8WVD5 230 aa6.68□□□□□ -1.34
MCF2L-223ENST00000473345 ARPC5LQ9BPX5 153 aa6.68□□□□□ -1.34
MCF2L-223ENST00000473345 PBDC1Q9BVG4 233 aa6.68□□□□□ -1.34
MCF2L-223ENST00000473345 ARV1Q9H2C2 271 aa6.68□□□□□ -1.34
MCF2L-223ENST00000473345 WFDC1Q9HC57 220 aa6.68□□□□□ -1.34
MCF2L-223ENST00000473345 HEYLQ9NQ87 328 aaPredicted RBP6.68□□□□□ -1.34
MCF2L-223ENST00000473345 STRAPQ9Y3F4 350 aaKnown RBP6.68□□□□□ -1.34
MCF2L-223ENST00000473345 TRAV8-2A0A0B4J237 113 aa6.67□□□□□ -1.34
MCF2L-223ENST00000473345 KANTRA0A1W2PQU2 76 aa6.67□□□□□ -1.34
MCF2L-223ENST00000473345 H3BP45 60 aa6.67□□□□□ -1.34
MCF2L-223ENST00000473345 M0R2Z0 102 aa6.67□□□□□ -1.34
MCF2L-223ENST00000473345 RGS13O14921 159 aa6.67□□□□□ -1.34
MCF2L-223ENST00000473345 NUDT3O95989 172 aa6.67□□□□□ -1.34
MCF2L-223ENST00000473345 DEFB130BP0DP73 79 aa6.67□□□□□ -1.34
MCF2L-223ENST00000473345 DEFB130AP0DP74 79 aa6.67□□□□□ -1.34
MCF2L-223ENST00000473345 PSMB3P49720 205 aa6.67□□□□□ -1.34
MCF2L-223ENST00000473345 XGP55808 180 aa6.67□□□□□ -1.34
MCF2L-223ENST00000473345 RPP30P78346 268 aaKnown RBP6.67□□□□□ -1.34
MCF2L-223ENST00000473345 SPINK13Q1W4C9 94 aa6.67□□□□□ -1.34
MCF2L-223ENST00000473345 RRN3P1Q2M238 152 aa6.67□□□□□ -1.34
MCF2L-223ENST00000473345 VWC2Q2TAL6 325 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms