RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 OR1L4Q8NGR5 311 aa11.34□□□□□ -0.59
HDAC6-218ENST00000470942 MRPS12O15235 138 aaKnown RBP11.33□□□□□ -0.6
HDAC6-218ENST00000470942 LY6G6CO95867 125 aa11.33□□□□□ -0.6
HDAC6-218ENST00000470942 CXCL3P19876 107 aa11.33□□□□□ -0.6
HDAC6-218ENST00000470942 RPL29P47914 159 aaKnown RBP11.33□□□□□ -0.6
HDAC6-218ENST00000470942 CNN1P51911 297 aaKnown RBP11.33□□□□□ -0.6
HDAC6-218ENST00000470942 B2MP61769 119 aa11.33□□□□□ -0.6
HDAC6-218ENST00000470942 PRR20EP86478 221 aa11.33□□□□□ -0.6
HDAC6-218ENST00000470942 PRR20CP86479 221 aa11.33□□□□□ -0.6
HDAC6-218ENST00000470942 PRR20DP86480 221 aa11.33□□□□□ -0.6
HDAC6-218ENST00000470942 PRR20BP86481 221 aa11.33□□□□□ -0.6
HDAC6-218ENST00000470942 PRR20AP86496 221 aa11.33□□□□□ -0.6
HDAC6-218ENST00000470942 OPCMLQ14982 345 aa11.33□□□□□ -0.6
HDAC6-218ENST00000470942 PSG3Q16557 428 aa11.33□□□□□ -0.6
HDAC6-218ENST00000470942 ZNF705AQ6ZN79 300 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-218ENST00000470942 PFDN5Q99471 154 aa11.33□□□□□ -0.6
HDAC6-218ENST00000470942 HRH4Q9H3N8 390 aa11.33□□□□□ -0.6
HDAC6-218ENST00000470942 SLC39A9Q9NUM3 307 aa11.33□□□□□ -0.6
HDAC6-218ENST00000470942 GOLT1BQ9Y3E0 138 aa11.33□□□□□ -0.6
HDAC6-218ENST00000470942 DNAH1Q9P2D7 4330 aa11.32□□□□□ -0.6
HDAC6-218ENST00000470942 H0YIZ8 118 aa11.32□□□□□ -0.6
HDAC6-218ENST00000470942 H2BFSP57053 126 aa11.32□□□□□ -0.6
HDAC6-218ENST00000470942 MORN5Q5VZ52 161 aa11.32□□□□□ -0.6
HDAC6-218ENST00000470942 LCN15Q6UWW0 184 aa11.32□□□□□ -0.6
HDAC6-218ENST00000470942 OR5C1Q8NGR4 320 aa11.32□□□□□ -0.6
HDAC6-218ENST00000470942 PPP1R1CQ8WVI7 109 aa11.32□□□□□ -0.6
HDAC6-218ENST00000470942 LINC00476Q8WZB0 136 aa11.32□□□□□ -0.6
HDAC6-218ENST00000470942 NEU1Q99519 415 aa11.32□□□□□ -0.6
HDAC6-218ENST00000470942 PXMP4Q9Y6I8 212 aa11.32□□□□□ -0.6
HDAC6-218ENST00000470942 TRAV5A0A0B4J249 113 aa11.31□□□□□ -0.6
HDAC6-218ENST00000470942 SMIM9A6NGZ8 99 aa11.31□□□□□ -0.6
HDAC6-218ENST00000470942 A8MTW9 85 aa11.31□□□□□ -0.6
HDAC6-218ENST00000470942 ZNF705FA8MVS1 300 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-218ENST00000470942 H3BTX0 84 aa11.31□□□□□ -0.6
HDAC6-218ENST00000470942 MPDU1O75352 247 aa11.31□□□□□ -0.6
HDAC6-218ENST00000470942 PRB4P10163 310 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-218ENST00000470942 CXCL2P19875 107 aa11.31□□□□□ -0.6
HDAC6-218ENST00000470942 EMP1P54849 157 aa11.31□□□□□ -0.6
HDAC6-218ENST00000470942 RHOBP62745 196 aa11.31□□□□□ -0.6
HDAC6-218ENST00000470942 HIST1H1AQ02539 215 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-218ENST00000470942 CLINT1Q14677 625 aa11.31□□□□□ -0.6
HDAC6-218ENST00000470942 OR11H7Q8NGC8 314 aa11.31□□□□□ -0.6
HDAC6-218ENST00000470942 C2CD4CQ8TF44 421 aa11.31□□□□□ -0.6
HDAC6-218ENST00000470942 SLC50A1Q9BRV3 221 aa11.31□□□□□ -0.6
HDAC6-218ENST00000470942 PPP1R14DQ9NXH3 145 aa11.31□□□□□ -0.6
HDAC6-218ENST00000470942 CELA1Q9UNI1 258 aa11.31□□□□□ -0.6
HDAC6-218ENST00000470942 C11orf94C9JXX5 98 aa11.3□□□□□ -0.6
HDAC6-218ENST00000470942 AMBPP02760 352 aa11.3□□□□□ -0.6
HDAC6-218ENST00000470942 SPINK13Q1W4C9 94 aa11.3□□□□□ -0.6
HDAC6-218ENST00000470942 AMTNQ6UX39 209 aa11.3□□□□□ -0.6
HDAC6-218ENST00000470942 ZNF767PQ75MW2 155 aa11.3□□□□□ -0.6
HDAC6-218ENST00000470942 OR8A1Q8NGG7 326 aa11.3□□□□□ -0.6
HDAC6-218ENST00000470942 THAP6Q8TBB0 222 aa11.3□□□□□ -0.6
HDAC6-218ENST00000470942 CHAC2Q8WUX2 184 aa11.3□□□□□ -0.6
HDAC6-218ENST00000470942 RPUSD4Q96CM3 377 aaKnown RBP11.3□□□□□ -0.6
HDAC6-218ENST00000470942 TMEM208Q9BTX3 173 aa11.3□□□□□ -0.6
HDAC6-218ENST00000470942 NPCDR1Q9BY65 106 aa11.3□□□□□ -0.6
HDAC6-218ENST00000470942 ZNF331Q9NQX6 463 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-218ENST00000470942 RFNGQ9Y644 331 aa11.3□□□□□ -0.6
HDAC6-218ENST00000470942 M0R2Z0 102 aa11.29□□□□□ -0.6
HDAC6-218ENST00000470942 MPC2O95563 127 aa11.29□□□□□ -0.6
HDAC6-218ENST00000470942 PET100P0DJ07 73 aa11.29□□□□□ -0.6
HDAC6-218ENST00000470942 Q6ZTC4 211 aa11.29□□□□□ -0.6
HDAC6-218ENST00000470942 C1orf158Q8N1D5 194 aa11.29□□□□□ -0.6
HDAC6-218ENST00000470942 IGF2BP2-AS1Q96M15 143 aa11.29□□□□□ -0.6
HDAC6-218ENST00000470942 TRAV10A0A0B4J240 114 aa11.28□□□□□ -0.6
HDAC6-218ENST00000470942 TMEM189A5PLL7 270 aa11.28□□□□□ -0.6
HDAC6-218ENST00000470942 IGLL5B9A064 214 aa11.28□□□□□ -0.6
HDAC6-218ENST00000470942 H3BQ15 152 aa11.28□□□□□ -0.6
HDAC6-218ENST00000470942 SLC17A3O00476 420 aa11.28□□□□□ -0.6
HDAC6-218ENST00000470942 INSP01308 110 aa11.28□□□□□ -0.6
HDAC6-218ENST00000470942 HBE1P02100 147 aa11.28□□□□□ -0.6
HDAC6-218ENST00000470942 IGLC2P0DOY2 106 aa11.28□□□□□ -0.6
HDAC6-218ENST00000470942 RNF126Q9BV68 326 aa11.28□□□□□ -0.6
HDAC6-218ENST00000470942 ALG5Q9Y673 324 aa11.28□□□□□ -0.6
HDAC6-218ENST00000470942 HYDINQ4G0P3 5121 aa11.27□□□□□ -0.6
HDAC6-218ENST00000470942 BOLA2-SMG1P6H3BVE0 249 aa11.27□□□□□ -0.61
HDAC6-218ENST00000470942 GUK1Q16774 197 aa11.27□□□□□ -0.61
HDAC6-218ENST00000470942 RRN3P1Q2M238 152 aa11.27□□□□□ -0.61
HDAC6-218ENST00000470942 C12orf74Q32Q52 190 aa11.27□□□□□ -0.61
HDAC6-218ENST00000470942 TRAV12-2A0A075B6T6 113 aa11.26□□□□□ -0.61
HDAC6-218ENST00000470942 LOC102723971A0A1B0GUV8 181 aa11.26□□□□□ -0.61
HDAC6-218ENST00000470942 CRXO43186 299 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-218ENST00000470942 PTTG1O95997 202 aa11.26□□□□□ -0.61
HDAC6-218ENST00000470942 SPART-AS1P0CW21 52 aa11.26□□□□□ -0.61
HDAC6-218ENST00000470942 GCSAMLQ5JQS6 135 aa11.26□□□□□ -0.61
HDAC6-218ENST00000470942 BAP18Q8IXM2 172 aa11.26□□□□□ -0.61
HDAC6-218ENST00000470942 SAT2Q96F10 170 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-218ENST00000470942 WDR61Q9GZS3 305 aaKnown RBP11.26□□□□□ -0.61
HDAC6-218ENST00000470942 ZNF586Q9NXT0 402 aa11.26□□□□□ -0.61
HDAC6-218ENST00000470942 HSPB11Q9Y547 144 aa11.26□□□□□ -0.61
HDAC6-218ENST00000470942 PRAC2D3DTV9 90 aa11.25□□□□□ -0.61
HDAC6-218ENST00000470942 C17orf112F2Z3M2 114 aa11.25□□□□□ -0.61
HDAC6-218ENST00000470942 RPL12P30050 165 aaKnown RBP11.25□□□□□ -0.61
HDAC6-218ENST00000470942 TCTAP57738 103 aa11.25□□□□□ -0.61
HDAC6-218ENST00000470942 OR10J6PQ8NGY7 276 aa11.25□□□□□ -0.61
HDAC6-218ENST00000470942 ATP5SQ99766 215 aa11.25□□□□□ -0.61
HDAC6-218ENST00000470942 SMIM3Q9BZL3 60 aa11.25□□□□□ -0.61
HDAC6-218ENST00000470942 KCNIP2Q9NS61 270 aa11.25□□□□□ -0.61
HDAC6-218ENST00000470942 MBD2Q9UBB5 411 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms