RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 CNPY1Q3B7I2 92 aa14.89□□□□□ -0.03
VSX1-206ENST00000444511 RNF212Q495C1 297 aa14.89□□□□□ -0.03
VSX1-206ENST00000444511 PXDC1Q5TGL8 231 aa14.89□□□□□ -0.03
VSX1-206ENST00000444511 PATE2Q6UY27 113 aa14.89□□□□□ -0.03
VSX1-206ENST00000444511 ZNF546Q86UE3 836 aa14.89□□□□□ -0.03
VSX1-206ENST00000444511 RCL1Q9Y2P8 373 aaKnown RBP14.89□□□□□ -0.03
VSX1-206ENST00000444511 A0A1B0GVY2 172 aa14.88□□□□□ -0.03
VSX1-206ENST00000444511 DEFB130BP0DP73 79 aa14.88□□□□□ -0.03
VSX1-206ENST00000444511 DEFB130AP0DP74 79 aa14.88□□□□□ -0.03
VSX1-206ENST00000444511 TSPOP30536 169 aa14.88□□□□□ -0.03
VSX1-206ENST00000444511 MBPP02686 304 aaPredicted RBP14.87□□□□□ -0.03
VSX1-206ENST00000444511 C15orf53Q8NAA6 179 aa14.87□□□□□ -0.03
VSX1-206ENST00000444511 RPUSD4Q96CM3 377 aaKnown RBP14.87□□□□□ -0.03
VSX1-206ENST00000444511 LINC01587Q99440 93 aa14.87□□□□□ -0.03
VSX1-206ENST00000444511 GGACTQ9BVM4 153 aa14.87□□□□□ -0.03
VSX1-206ENST00000444511 C7orf66A4D0T2 115 aa14.86□□□□□ -0.03
VSX1-206ENST00000444511 L7N2F9 121 aa14.86□□□□□ -0.03
VSX1-206ENST00000444511 AGPAT2O15120 278 aa14.86□□□□□ -0.03
VSX1-206ENST00000444511 CXCL2P19875 107 aa14.86□□□□□ -0.03
VSX1-206ENST00000444511 AZU1P20160 251 aa14.86□□□□□ -0.03
VSX1-206ENST00000444511 VAMP2P63027 116 aa14.86□□□□□ -0.03
VSX1-206ENST00000444511 ARL16Q0P5N6 197 aa14.86□□□□□ -0.03
VSX1-206ENST00000444511 ZNF846Q147U1 533 aa14.86□□□□□ -0.03
VSX1-206ENST00000444511 LINC00305Q7Z4B0 112 aa14.86□□□□□ -0.03
VSX1-206ENST00000444511 TMEM256Q8N2U0 113 aa14.86□□□□□ -0.03
VSX1-206ENST00000444511 C20orf85Q9H1P6 137 aa14.86□□□□□ -0.03
VSX1-206ENST00000444511 CCSO14618 274 aa14.85□□□□□ -0.03
VSX1-206ENST00000444511 MRPS12O15235 138 aaKnown RBP14.85□□□□□ -0.03
VSX1-206ENST00000444511 COX7A2P2O60397 106 aa14.85□□□□□ -0.03
VSX1-206ENST00000444511 PRB4P10163 310 aaPredicted RBP14.85□□□□□ -0.03
VSX1-206ENST00000444511 LCN15Q6UWW0 184 aa14.85□□□□□ -0.03
VSX1-206ENST00000444511 Q6ZR54 194 aa14.85□□□□□ -0.03
VSX1-206ENST00000444511 SNRPCP09234 159 aaKnown RBP14.84□□□□□ -0.03
VSX1-206ENST00000444511 HTN1P15515 57 aa14.84□□□□□ -0.03
VSX1-206ENST00000444511 TAS2R60P59551 318 aa14.84□□□□□ -0.03
VSX1-206ENST00000444511 SOHLH1Q5JUK2 328 aa14.84□□□□□ -0.03
VSX1-206ENST00000444511 BPIFA4PQ86YQ2 179 aa14.84□□□□□ -0.03
VSX1-206ENST00000444511 SLC50A1Q9BRV3 221 aa14.84□□□□□ -0.03
VSX1-206ENST00000444511 ATG101Q9BSB4 218 aa14.84□□□□□ -0.03
VSX1-206ENST00000444511 ZNF331Q9NQX6 463 aaPredicted RBP14.84□□□□□ -0.03
VSX1-206ENST00000444511 KIAA1109Q2LD37 5005 aa14.84□□□□□ -0.03
VSX1-206ENST00000444511 FAT2Q9NYQ8 4349 aa14.83□□□□□ -0.04
VSX1-206ENST00000444511 DNAH2Q9P225 4427 aa14.83□□□□□ -0.04
VSX1-206ENST00000444511 PLAC8L1A1L4L8 177 aa14.83□□□□□ -0.04
VSX1-206ENST00000444511 FAM25EA8MYX2 175 aa14.83□□□□□ -0.04
VSX1-206ENST00000444511 F5H768 121 aa14.83□□□□□ -0.04
VSX1-206ENST00000444511 CDKN1BP46527 198 aa14.83□□□□□ -0.04
VSX1-206ENST00000444511 BCAP31P51572 246 aa14.83□□□□□ -0.04
VSX1-206ENST00000444511 FCN2Q15485 313 aa14.83□□□□□ -0.04
VSX1-206ENST00000444511 MGST2Q99735 147 aa14.83□□□□□ -0.04
VSX1-206ENST00000444511 LSM5Q9Y4Y9 91 aaKnown RBP14.83□□□□□ -0.04
VSX1-206ENST00000444511 LYRM1O43325 122 aa14.82□□□□□ -0.04
VSX1-206ENST00000444511 RAB31Q13636 194 aa14.82□□□□□ -0.04
VSX1-206ENST00000444511 C10orf113Q5VZT2 155 aa14.82□□□□□ -0.04
VSX1-206ENST00000444511 C16orf74Q96GX8 76 aa14.82□□□□□ -0.04
VSX1-206ENST00000444511 PLA2G10O15496 165 aa14.81□□□□□ -0.04
VSX1-206ENST00000444511 ATP5G1P05496 136 aa14.81□□□□□ -0.04
VSX1-206ENST00000444511 ATP5G3P48201 142 aa14.81□□□□□ -0.04
VSX1-206ENST00000444511 CAMLGP49069 296 aa14.81□□□□□ -0.04
VSX1-206ENST00000444511 CAV2P51636 162 aa14.81□□□□□ -0.04
VSX1-206ENST00000444511 FAM3BP58499 235 aaPredicted RBP14.81□□□□□ -0.04
VSX1-206ENST00000444511 TMEM37Q8WXS4 190 aa14.81□□□□□ -0.04
VSX1-206ENST00000444511 TIMM8BQ9Y5J9 83 aaPredicted RBP14.81□□□□□ -0.04
VSX1-206ENST00000444511 TRAV6A0A075B6T7 132 aa14.8□□□□□ -0.04
VSX1-206ENST00000444511 C5orf51A6NDU8 294 aa14.8□□□□□ -0.04
VSX1-206ENST00000444511 CBY3A6NI87 242 aa14.8□□□□□ -0.04
VSX1-206ENST00000444511 H3BTX0 84 aa14.8□□□□□ -0.04
VSX1-206ENST00000444511 TCRBP04435 133 aa14.8□□□□□ -0.04
VSX1-206ENST00000444511 OPCMLQ14982 345 aa14.8□□□□□ -0.04
VSX1-206ENST00000444511 Q6ZRG5 221 aa14.8□□□□□ -0.04
VSX1-206ENST00000444511 OR10J6PQ8NGY7 276 aa14.8□□□□□ -0.04
VSX1-206ENST00000444511 H7BYZ3 331 aa14.79□□□□□ -0.04
VSX1-206ENST00000444511 CST7O76096 145 aa14.79□□□□□ -0.04
VSX1-206ENST00000444511 NUDT3O95989 172 aa14.79□□□□□ -0.04
VSX1-206ENST00000444511 C1orf134Q5TEV5 83 aa14.79□□□□□ -0.04
VSX1-206ENST00000444511 MORN5Q5VZ52 161 aa14.79□□□□□ -0.04
VSX1-206ENST00000444511 ZNF493Q6ZR52 646 aa14.79□□□□□ -0.04
VSX1-206ENST00000444511 NRARPQ7Z6K4 114 aa14.79□□□□□ -0.04
VSX1-206ENST00000444511 ZNF431Q8TF32 576 aaPredicted RBP14.79□□□□□ -0.04
VSX1-206ENST00000444511 DNAJC4Q9NNZ3 241 aa14.79□□□□□ -0.04
VSX1-206ENST00000444511 NUDT15Q9NV35 164 aa14.79□□□□□ -0.04
VSX1-206ENST00000444511 DNAH17Q9UFH2 4485 aa14.79□□□□□ -0.04
VSX1-206ENST00000444511 PXMP4Q9Y6I8 212 aa14.79□□□□□ -0.04
VSX1-206ENST00000444511 SLC17A3O00476 420 aa14.78□□□□□ -0.04
VSX1-206ENST00000444511 MED14OSP0DP75 135 aa14.78□□□□□ -0.04
VSX1-206ENST00000444511 PVALBP20472 110 aaPredicted RBP14.78□□□□□ -0.04
VSX1-206ENST00000444511 TMEM263Q8WUH6 116 aaKnown RBP14.78□□□□□ -0.04
VSX1-206ENST00000444511 C20orf144Q9BQM9 153 aa14.78□□□□□ -0.04
VSX1-206ENST00000444511 SEC22CQ9BRL7 303 aa14.78□□□□□ -0.04
VSX1-206ENST00000444511 NOP10Q9NPE3 64 aaKnown RBP14.78□□□□□ -0.04
VSX1-206ENST00000444511 UQCC1Q9NVA1 299 aa14.78□□□□□ -0.04
VSX1-206ENST00000444511 FAM24AA6NFZ4 105 aa14.77□□□□□ -0.05
VSX1-206ENST00000444511 PRAC2D3DTV9 90 aa14.77□□□□□ -0.05
VSX1-206ENST00000444511 IGLC2P0DOY2 106 aa14.77□□□□□ -0.05
VSX1-206ENST00000444511 MIC13Q5XKP0 118 aa14.77□□□□□ -0.05
VSX1-206ENST00000444511 OR1L4Q8NGR5 311 aa14.77□□□□□ -0.05
VSX1-206ENST00000444511 RNASE8Q8TDE3 154 aaKnown RBP14.77□□□□□ -0.05
VSX1-206ENST00000444511 C2orf50Q96LR7 162 aa14.77□□□□□ -0.05
VSX1-206ENST00000444511 PARD6GQ9BYG4 376 aaPredicted RBP14.77□□□□□ -0.05
VSX1-206ENST00000444511 H3BQ15 152 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms