RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 LINC00052Q96N35 136 aa6.88□□□□□ -1.31
PDGFC-202ENST00000422544 FAM110AQ9BQ89 295 aa6.88□□□□□ -1.31
PDGFC-202ENST00000422544 PSMG3Q9BT73 122 aaPredicted RBP6.88□□□□□ -1.31
PDGFC-202ENST00000422544 SLC25A2Q9BXI2 301 aa6.88□□□□□ -1.31
PDGFC-202ENST00000422544 FUT9Q9Y231 359 aa6.88□□□□□ -1.31
PDGFC-202ENST00000422544 STAB2Q8WWQ8 2551 aa6.88□□□□□ -1.31
PDGFC-202ENST00000422544 A0A087X0K7 114 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 TRAV8-2A0A0B4J237 113 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 KANTRA0A1W2PQU2 76 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 A8MZ25 164 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 H3BQ15 152 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 H3BTX0 84 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 BCL2L11O43521 198 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 PFDN1O60925 122 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 M6PRP20645 277 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 ID1P41134 155 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 MEOX2P50222 304 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 SNRPD3P62318 126 aaKnown RBP6.87□□□□□ -1.31
PDGFC-202ENST00000422544 SERF2P84101 59 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 ZFP69Q49AA0 526 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 OR10G4Q8NGN3 311 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 OR10G9Q8NGN4 311 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 OR10G7Q8NGN6 311 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 OR2G3Q8NGZ4 309 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 FAM167A-AS1Q96KT0 104 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 C20orf173Q96LM9 149 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 ASCL2Q99929 193 aa6.87□□□□□ -1.31
PDGFC-202ENST00000422544 ZNF471Q9BX82 626 aaPredicted RBP6.87□□□□□ -1.31
PDGFC-202ENST00000422544 MRPL32Q9BYC8 188 aaKnown RBP6.87□□□□□ -1.31
PDGFC-202ENST00000422544 A0A1W2PPV4 95 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 KNCNA6PVL3 124 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 ISLRO14498 428 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 IGLC2P0DOY2 106 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 PYYP10082 97 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 RPL35AP18077 110 aaKnown RBP6.86□□□□□ -1.31
PDGFC-202ENST00000422544 PSMB3P49720 205 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 DEFB1P60022 68 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 RHOBP62745 196 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 SAMD13Q5VXD3 122 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 FAM122CQ6P4D5 195 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 LINC00322Q6ZN03 302 aaPredicted RBP6.86□□□□□ -1.31
PDGFC-202ENST00000422544 SBSPONQ8IVN8 264 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 LRRC20Q8TCA0 184 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 OR51M1Q9H341 326 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 HRH4Q9H3N8 390 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 ZNF586Q9NXT0 402 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 TMEM14CQ9P0S9 112 aa6.86□□□□□ -1.31
PDGFC-202ENST00000422544 LOC102724200A0A096LPH7 203 aaPredicted RBP6.85□□□□□ -1.31
PDGFC-202ENST00000422544 HMGB3O15347 200 aaKnown RBP6.85□□□□□ -1.31
PDGFC-202ENST00000422544 MBP02144 154 aa6.85□□□□□ -1.31
PDGFC-202ENST00000422544 OR10J4P0C629 311 aa6.85□□□□□ -1.31
PDGFC-202ENST00000422544 HIST1H1EP10412 219 aaKnown RBP6.85□□□□□ -1.31
PDGFC-202ENST00000422544 SPP1P10451 314 aa6.85□□□□□ -1.31
PDGFC-202ENST00000422544 HLA-DMBP28068 263 aa6.85□□□□□ -1.31
PDGFC-202ENST00000422544 TMEM41BQ5BJD5 291 aa6.85□□□□□ -1.31
PDGFC-202ENST00000422544 ACTL10Q5JWF8 245 aa6.85□□□□□ -1.31
PDGFC-202ENST00000422544 C9orf62Q8N4C0 152 aa6.85□□□□□ -1.31
PDGFC-202ENST00000422544 RPP25LQ8N5L8 163 aaKnown RBP6.85□□□□□ -1.31
PDGFC-202ENST00000422544 RNF182Q8N6D2 247 aa6.85□□□□□ -1.31
PDGFC-202ENST00000422544 BLNKQ8WV28 456 aa6.85□□□□□ -1.31
PDGFC-202ENST00000422544 RNF141Q8WVD5 230 aa6.85□□□□□ -1.31
PDGFC-202ENST00000422544 SAT2Q96F10 170 aaPredicted RBP6.85□□□□□ -1.31
PDGFC-202ENST00000422544 ZNF503Q96F45 646 aa6.85□□□□□ -1.31
PDGFC-202ENST00000422544 B9D2Q9BPU9 175 aa6.85□□□□□ -1.31
PDGFC-202ENST00000422544 PAXXQ9BUH6 204 aa6.85□□□□□ -1.31
PDGFC-202ENST00000422544 RPRMQ9NS64 109 aa6.85□□□□□ -1.31
PDGFC-202ENST00000422544 HERC2O95714 4834 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 FRAS1Q86XX4 4008 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 TRBV19A0A075B6N1 114 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 F6UB75 175 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 SLC17A3O00476 420 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 OR7C2O60412 319 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 NBEAP1P0C6P0 100 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 PRB4P10163 310 aaPredicted RBP6.84□□□□□ -1.31
PDGFC-202ENST00000422544 CDC34P49427 236 aaPredicted RBP6.84□□□□□ -1.31
PDGFC-202ENST00000422544 NKX2-5P52952 324 aaPredicted RBP6.84□□□□□ -1.31
PDGFC-202ENST00000422544 TAS2R45P59539 299 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 EIF5AP63241 154 aaKnown RBP6.84□□□□□ -1.31
PDGFC-202ENST00000422544 GUK1Q16774 197 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 HAGHQ16775 308 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 AKR1C8PQ5T2L2 129 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 GDF5OSQ5U4N7 250 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 LCN15Q6UWW0 184 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 STHQ8IWL8 128 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 BAP18Q8IXM2 172 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 RAB24Q969Q5 203 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 FXYD5Q96DB9 178 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 ACTR3CQ9C0K3 210 aaPredicted RBP6.84□□□□□ -1.31
PDGFC-202ENST00000422544 ZNF331Q9NQX6 463 aaPredicted RBP6.84□□□□□ -1.31
PDGFC-202ENST00000422544 RYR1P21817 5038 aa6.84□□□□□ -1.31
PDGFC-202ENST00000422544 NDUFB4O95168 129 aa6.83□□□□□ -1.32
PDGFC-202ENST00000422544 SEC11BP0C7V7 166 aa6.83□□□□□ -1.32
PDGFC-202ENST00000422544 TPT1P13693 172 aaKnown RBP6.83□□□□□ -1.32
PDGFC-202ENST00000422544 PSG3Q16557 428 aa6.83□□□□□ -1.32
PDGFC-202ENST00000422544 KHDC3LQ587J8 217 aa6.83□□□□□ -1.32
PDGFC-202ENST00000422544 ZNF738Q8NE65 137 aa6.83□□□□□ -1.32
PDGFC-202ENST00000422544 STOML3Q8TAV4 291 aa6.83□□□□□ -1.32
PDGFC-202ENST00000422544 SLC50A1Q9BRV3 221 aa6.83□□□□□ -1.32
PDGFC-202ENST00000422544 SAV1Q9H4B6 383 aaPredicted RBP6.83□□□□□ -1.32
PDGFC-202ENST00000422544 ZNF705FA8MVS1 300 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms