RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 HERVK_113P61574 105 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 OR10J3Q5JRS4 329 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 MYOZ3Q8TDC0 251 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 MISP3Q96FF7 219 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 ZNRD1Q9P1U0 126 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 NAT8BQ9UHF3 227 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 CRYBB3P26998 211 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 CENPWQ5EE01 88 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 COL5A1-AS1Q5SY13 56 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 GPHB5Q86YW7 130 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 SLC25A39Q9BZJ4 359 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-206ENST00000397617 FBXL15Q9H469 300 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 C19orf71A6NCJ1 209 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 F2Z2F3 143 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 SAA4P35542 130 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 LTAP01374 205 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 JOSD1Q15040 202 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-206ENST00000397617 SPRNQ5BIV9 151 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 FAM110AQ9BQ89 295 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 CMC4P56277 68 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-206ENST00000397617 IBA57Q5T440 356 aaKnown RBP4.62□□□□□ -1.67
PTPRD-206ENST00000397617 C1orf229Q6ZS94 237 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-206ENST00000397617 APRG1Q8IVJ8 170 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 LINC01356Q8N9X3 169 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 TGIF2-C20orf24A0A0A6YYL0 155 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 IGHV3-64DA0A0J9YX35 117 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 SPINK2P20155 84 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 NDUFA6P56556 154 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 LTC4SQ16873 150 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 SPATA12Q7Z6I5 190 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 SIGLECL1Q8N7X8 197 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 WNT10AQ9GZT5 417 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 IZUMO1RA6ND01 250 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 NXPH3O95157 252 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 NUDT3O95989 172 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 CTSGP08311 255 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 TCL1AP56279 114 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 PATE2Q6UY27 113 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 ZNF503Q96F45 646 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 BPESC1Q9GZL8 116 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 SMIM27A0A1W2PRY6 76 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 TCAPO15273 167 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 MGST1P10620 155 aaKnown RBP4.61□□□□□ -1.67
PTPRD-206ENST00000397617 RPL32P62910 135 aaKnown RBP4.61□□□□□ -1.67
PTPRD-206ENST00000397617 LINC00305Q7Z4B0 112 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 OR8I2Q8N0Y5 310 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 CITED2Q99967 270 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-206ENST00000397617 VAMP8Q9BV40 100 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 V9GYV3 84 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 A0A1B0GXF2 115 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 SLC35B1P78383 322 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 C12orf54Q6X4T0 127 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 VKORC1L1Q8N0U8 176 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 IGF2BP2-AS1Q96M15 143 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 RARRES2Q99969 163 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 MRPS12O15235 138 aaKnown RBP4.61□□□□□ -1.67
PTPRD-206ENST00000397617 BUB3O43684 328 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 FABP9Q0Z7S8 132 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 BATFQ16520 125 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 RPEL1Q2QD12 228 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 ZNF493Q6ZR52 646 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 OCC1Q8TAD7 63 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 VSIRQ9H7M9 311 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 IGHG4P01861 327 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 COX6B1P14854 86 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 ZNF90Q03938 601 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 Q1RN00 199 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 IGHV4-4A0A075B6R2 117 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 A0A1W2PPR1 153 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 PPIFP30405 207 aaKnown RBP4.61□□□□□ -1.67
PTPRD-206ENST00000397617 DUX4L9Q6RFH8 374 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-206ENST00000397617 RABAC1Q9UI14 185 aa4.61□□□□□ -1.67
PTPRD-206ENST00000397617 REG1BP48304 166 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 PAPPA-AS1Q5QFB9 102 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 SIGLEC15Q6ZMC9 328 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 TPPP3Q9BW30 176 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 HIVEP1P15822 2718 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 RIGQ13278 110 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 C5orf56Q8N8D9 126 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 HSBP1O75506 76 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 COX7A1P24310 79 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 LINC00477Q96M19 166 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 A0A1B0GUT8 65 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 TMEM238LA0A1B0GVL6 79 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 A6NJY4 79 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 OVOL1O14753 267 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 KRTDAPP60985 99 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 KLF5Q13887 457 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-206ENST00000397617 STAB2Q8WWQ8 2551 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 LGALS9O00182 355 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 ERVFC1-1P60608 527 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 MIR17HGQ75NE6 70 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 METTL26Q96S19 204 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 A0A096LNT2 108 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 ID1P41134 155 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 PMCHL1Q16048 86 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 Q8N2B8 174 aa4.6□□□□□ -1.67
PTPRD-206ENST00000397617 TRAV41A0A0B4J266 112 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 CTRLP40313 264 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 MFAP2P55001 183 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms