RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 TNFSF13O75888 250 aa13.26□□□□□ -0.29
RGP1-201ENST00000378078 FAM223AQ8IWN6 122 aa13.26□□□□□ -0.29
RGP1-201ENST00000378078 FAM120AOSQ5T036 256 aa13.26□□□□□ -0.29
RGP1-201ENST00000378078 RPRMLQ8N4K4 120 aa13.26□□□□□ -0.29
RGP1-201ENST00000378078 IFITM2Q01629 132 aa13.26□□□□□ -0.29
RGP1-201ENST00000378078 C5orf47Q569G3 176 aa13.26□□□□□ -0.29
RGP1-201ENST00000378078 GGNQ86UU5 652 aa13.26□□□□□ -0.29
RGP1-201ENST00000378078 PHF3Q92576 2039 aaKnown RBP13.26□□□□□ -0.29
RGP1-201ENST00000378078 IGKV1-27A0A075B6S5 117 aa13.26□□□□□ -0.29
RGP1-201ENST00000378078 CR1LQ2VPA4 569 aa13.26□□□□□ -0.29
RGP1-201ENST00000378078 PLEKHB2Q96CS7 222 aa13.26□□□□□ -0.29
RGP1-201ENST00000378078 DEFB136Q30KP8 78 aa13.26□□□□□ -0.29
RGP1-201ENST00000378078 MORN5Q5VZ52 161 aa13.26□□□□□ -0.29
RGP1-201ENST00000378078 TRPM7Q96QT4 1865 aa13.26□□□□□ -0.29
RGP1-201ENST00000378078 KIF26BQ2KJY2 2108 aa13.26□□□□□ -0.29
RGP1-201ENST00000378078 MYMXA0A1B0GTQ4 84 aa13.25□□□□□ -0.29
RGP1-201ENST00000378078 APOC4P55056 127 aa13.25□□□□□ -0.29
RGP1-201ENST00000378078 TMEM170AQ8WVE7 144 aa13.25□□□□□ -0.29
RGP1-201ENST00000378078 MMP23AO75900 390 aa13.25□□□□□ -0.29
RGP1-201ENST00000378078 J3QKU1 62 aa13.25□□□□□ -0.29
RGP1-201ENST00000378078 IGHG3P01860 377 aa13.25□□□□□ -0.29
RGP1-201ENST00000378078 SPINK8P0C7L1 97 aa13.25□□□□□ -0.29
RGP1-201ENST00000378078 IGKV1-12A0A0C4DH73 117 aa13.25□□□□□ -0.29
RGP1-201ENST00000378078 IGKV1D-12P01611 117 aa13.25□□□□□ -0.29
RGP1-201ENST00000378078 GAGE2BQ13066 116 aa13.25□□□□□ -0.29
RGP1-201ENST00000378078 CHCHD1Q96BP2 118 aaKnown RBP13.25□□□□□ -0.29
RGP1-201ENST00000378078 KIAA2026Q5HYC2 2103 aa13.25□□□□□ -0.29
RGP1-201ENST00000378078 TET1Q8NFU7 2136 aa13.25□□□□□ -0.29
RGP1-201ENST00000378078 XCL1P47992 114 aa13.24□□□□□ -0.29
RGP1-201ENST00000378078 MRPS18CQ9Y3D5 142 aaKnown RBP13.24□□□□□ -0.29
RGP1-201ENST00000378078 A0A1B0GWJ7 208 aa13.24□□□□□ -0.29
RGP1-201ENST00000378078 GNB1LQ9BYB4 327 aa13.24□□□□□ -0.29
RGP1-201ENST00000378078 TP53TG1Q9Y2A0 90 aa13.24□□□□□ -0.29
RGP1-201ENST00000378078 CD200R1LQ6Q8B3 271 aa13.24□□□□□ -0.29
RGP1-201ENST00000378078 PLSCR4Q9NRQ2 329 aa13.24□□□□□ -0.29
RGP1-201ENST00000378078 RNF222A6NCQ9 220 aa13.23□□□□□ -0.29
RGP1-201ENST00000378078 SUPT4H1P63272 117 aaKnown RBP13.23□□□□□ -0.29
RGP1-201ENST00000378078 ZFP36L1Q07352 338 aaKnown RBP13.23□□□□□ -0.29
RGP1-201ENST00000378078 LIME1Q9H400 295 aa13.23□□□□□ -0.29
RGP1-201ENST00000378078 SIGLEC9Q9Y336 463 aa13.23□□□□□ -0.29
RGP1-201ENST00000378078 TMEM213A2RRL7 107 aa13.23□□□□□ -0.29
RGP1-201ENST00000378078 CXCL1P09341 107 aa13.23□□□□□ -0.29
RGP1-201ENST00000378078 TCTEX1D4Q5JR98 221 aa13.23□□□□□ -0.29
RGP1-201ENST00000378078 MINOS1Q5TGZ0 78 aa13.23□□□□□ -0.29
RGP1-201ENST00000378078 RNF144BQ7Z419 303 aa13.23□□□□□ -0.29
RGP1-201ENST00000378078 STPG4Q8N801 248 aa13.23□□□□□ -0.29
RGP1-201ENST00000378078 MINOS1-NBL1R4GNA1 71 aa13.23□□□□□ -0.29
RGP1-201ENST00000378078 CABIN1Q9Y6J0 2220 aa13.23□□□□□ -0.29
RGP1-201ENST00000378078 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.23□□□□□ -0.29
RGP1-201ENST00000378078 LINC00473A8K010 186 aa13.23□□□□□ -0.29
RGP1-201ENST00000378078 IGFBP3P17936 291 aaPredicted RBP13.23□□□□□ -0.29
RGP1-201ENST00000378078 DAZ1Q9NQZ3 744 aaKnown RBP13.23□□□□□ -0.29
RGP1-201ENST00000378078 IL18BPO95998 194 aa13.23□□□□□ -0.29
RGP1-201ENST00000378078 ARMS2P0C7Q2 107 aa13.23□□□□□ -0.29
RGP1-201ENST00000378078 LRRK1Q38SD2 2015 aa13.22□□□□□ -0.29
RGP1-201ENST00000378078 NR2C2APQ86WQ0 139 aa13.22□□□□□ -0.29
RGP1-201ENST00000378078 RPP25LQ8N5L8 163 aaKnown RBP13.22□□□□□ -0.29
RGP1-201ENST00000378078 USMG5Q96IX5 58 aa13.22□□□□□ -0.29
RGP1-201ENST00000378078 NOP10Q9NPE3 64 aaKnown RBP13.22□□□□□ -0.29
RGP1-201ENST00000378078 OSTCQ9NRP0 149 aa13.22□□□□□ -0.29
RGP1-201ENST00000378078 DOCK9Q9BZ29 2069 aa13.22□□□□□ -0.29
RGP1-201ENST00000378078 IGKV1-16P04430 117 aa13.22□□□□□ -0.29
RGP1-201ENST00000378078 GLRX5Q86SX6 157 aa13.22□□□□□ -0.29
RGP1-201ENST00000378078 DIDO1Q9BTC0 2240 aaKnown RBP13.22□□□□□ -0.29
RGP1-201ENST00000378078 COL4A6Q14031 1691 aa13.22□□□□□ -0.29
RGP1-201ENST00000378078 NTF4P34130 210 aa13.22□□□□□ -0.29
RGP1-201ENST00000378078 MST1LQ2TV78 715 aa13.22□□□□□ -0.29
RGP1-201ENST00000378078 PTPRDP23468 1912 aa13.21□□□□□ -0.29
RGP1-201ENST00000378078 PPBPP02775 128 aa13.21□□□□□ -0.29
RGP1-201ENST00000378078 TEX36Q5VZQ5 186 aa13.21□□□□□ -0.29
RGP1-201ENST00000378078 DUX4L9Q6RFH8 374 aaPredicted RBP13.21□□□□□ -0.29
RGP1-201ENST00000378078 SMIM2Q9BVW6 85 aa13.21□□□□□ -0.29
RGP1-201ENST00000378078 SPRY2O43597 315 aa13.21□□□□□ -0.29
RGP1-201ENST00000378078 IGHV3-30P01768 117 aa13.21□□□□□ -0.29
RGP1-201ENST00000378078 IGHV3-33P01772 117 aa13.21□□□□□ -0.29
RGP1-201ENST00000378078 IGHV3-30-3P0DP02 117 aa13.21□□□□□ -0.29
RGP1-201ENST00000378078 IGHV3-30-5P0DP03 117 aa13.21□□□□□ -0.29
RGP1-201ENST00000378078 GBF1Q92538 1859 aa13.21□□□□□ -0.29
RGP1-201ENST00000378078 COL5A3P25940 1745 aaPredicted RBP13.21□□□□□ -0.29
RGP1-201ENST00000378078 CRLF1O75462 422 aa13.21□□□□□ -0.29
RGP1-201ENST00000378078 TNFRSF14Q92956 283 aa13.21□□□□□ -0.29
RGP1-201ENST00000378078 LRRC37AA6NMS7 1700 aa13.21□□□□□ -0.3
RGP1-201ENST00000378078 LINC00587B1AMM8 73 aa13.21□□□□□ -0.3
RGP1-201ENST00000378078 LINC00271P0C7V0 271 aa13.21□□□□□ -0.3
RGP1-201ENST00000378078 DNAJC30Q96LL9 226 aa13.21□□□□□ -0.3
RGP1-201ENST00000378078 CACNA1IQ9P0X4 2223 aa13.21□□□□□ -0.3
RGP1-201ENST00000378078 SEC16AO15027 2179 aa13.21□□□□□ -0.3
RGP1-201ENST00000378078 HSD52Q0P140 79 aa13.21□□□□□ -0.3
RGP1-201ENST00000378078 FREM3P0C091 2139 aa13.2□□□□□ -0.3
RGP1-201ENST00000378078 TICRRQ7Z2Z1 1910 aa13.2□□□□□ -0.3
RGP1-201ENST00000378078 M0R1W7 72 aa13.2□□□□□ -0.3
RGP1-201ENST00000378078 TSC2P49815 1807 aa13.2□□□□□ -0.3
RGP1-201ENST00000378078 DSCR8Q96T75 97 aa13.19□□□□□ -0.3
RGP1-201ENST00000378078 KLHDC3Q9BQ90 382 aa13.19□□□□□ -0.3
RGP1-201ENST00000378078 PLXND1Q9Y4D7 1925 aa13.19□□□□□ -0.3
RGP1-201ENST00000378078 ADAMTS7Q9UKP4 1686 aa13.19□□□□□ -0.3
RGP1-201ENST00000378078 SBF1O95248 1867 aa13.19□□□□□ -0.3
RGP1-201ENST00000378078 IGKV1D-17A0A075B6S4 117 aa13.19□□□□□ -0.3
RGP1-201ENST00000378078 IGLV10-54A0A075B6I4 117 aa13.19□□□□□ -0.3
RGP1-201ENST00000378078 GAS1P54826 345 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms