RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 CYCSP99999 105 aaKnown RBP12.14□□□□□ -0.47
HMGN4-201ENST00000377575 ATP6V1FQ16864 119 aa12.14□□□□□ -0.47
HMGN4-201ENST00000377575 IGFL4Q6B9Z1 124 aa12.14□□□□□ -0.47
HMGN4-201ENST00000377575 LCN15Q6UWW0 184 aa12.14□□□□□ -0.47
HMGN4-201ENST00000377575 BPIFA4PQ86YQ2 179 aa12.14□□□□□ -0.47
HMGN4-201ENST00000377575 OR1L4Q8NGR5 311 aa12.14□□□□□ -0.47
HMGN4-201ENST00000377575 PFDN5Q99471 154 aa12.14□□□□□ -0.47
HMGN4-201ENST00000377575 MARVELD1Q9BSK0 173 aa12.14□□□□□ -0.47
HMGN4-201ENST00000377575 IGHV3OR16-12A0A075B7B8 117 aa12.13□□□□□ -0.47
HMGN4-201ENST00000377575 AMBPP02760 352 aa12.13□□□□□ -0.47
HMGN4-201ENST00000377575 HLA-DMBP28068 263 aa12.13□□□□□ -0.47
HMGN4-201ENST00000377575 CNN1P51911 297 aaKnown RBP12.13□□□□□ -0.47
HMGN4-201ENST00000377575 MIC13Q5XKP0 118 aa12.13□□□□□ -0.47
HMGN4-201ENST00000377575 TMEM37Q8WXS4 190 aa12.13□□□□□ -0.47
HMGN4-201ENST00000377575 SLC50A1Q9BRV3 221 aa12.13□□□□□ -0.47
HMGN4-201ENST00000377575 SLC25A31Q9H0C2 315 aa12.13□□□□□ -0.47
HMGN4-201ENST00000377575 RFNGQ9Y644 331 aa12.13□□□□□ -0.47
HMGN4-201ENST00000377575 HYDINQ4G0P3 5121 aa12.13□□□□□ -0.47
HMGN4-201ENST00000377575 E5RGE8 158 aa12.12□□□□□ -0.47
HMGN4-201ENST00000377575 MRPS12O15235 138 aaKnown RBP12.12□□□□□ -0.47
HMGN4-201ENST00000377575 MPDU1O75352 247 aa12.12□□□□□ -0.47
HMGN4-201ENST00000377575 SIX6O95475 246 aa12.12□□□□□ -0.47
HMGN4-201ENST00000377575 CXCL3P19876 107 aa12.12□□□□□ -0.47
HMGN4-201ENST00000377575 FGF7P21781 194 aa12.12□□□□□ -0.47
HMGN4-201ENST00000377575 RPL29P47914 159 aaKnown RBP12.12□□□□□ -0.47
HMGN4-201ENST00000377575 TCTAP57738 103 aa12.12□□□□□ -0.47
HMGN4-201ENST00000377575 B2MP61769 119 aa12.12□□□□□ -0.47
HMGN4-201ENST00000377575 PRR20EP86478 221 aa12.12□□□□□ -0.47
HMGN4-201ENST00000377575 PRR20CP86479 221 aa12.12□□□□□ -0.47
HMGN4-201ENST00000377575 PRR20DP86480 221 aa12.12□□□□□ -0.47
HMGN4-201ENST00000377575 PRR20BP86481 221 aa12.12□□□□□ -0.47
HMGN4-201ENST00000377575 PRR20AP86496 221 aa12.12□□□□□ -0.47
HMGN4-201ENST00000377575 OPCMLQ14982 345 aa12.12□□□□□ -0.47
HMGN4-201ENST00000377575 LRRC37A5PQ49AS3 106 aa12.12□□□□□ -0.47
HMGN4-201ENST00000377575 DNAJC4Q9NNZ3 241 aa12.12□□□□□ -0.47
HMGN4-201ENST00000377575 TRAV10A0A0B4J240 114 aa12.11□□□□□ -0.47
HMGN4-201ENST00000377575 SSNA1O43805 119 aa12.11□□□□□ -0.47
HMGN4-201ENST00000377575 PSG3Q16557 428 aa12.11□□□□□ -0.47
HMGN4-201ENST00000377575 AMTNQ6UX39 209 aa12.11□□□□□ -0.47
HMGN4-201ENST00000377575 Q6ZTC4 211 aa12.11□□□□□ -0.47
HMGN4-201ENST00000377575 OR11H7Q8NGC8 314 aa12.11□□□□□ -0.47
HMGN4-201ENST00000377575 IGF2BP2-AS1Q96M15 143 aa12.11□□□□□ -0.47
HMGN4-201ENST00000377575 SLC39A9Q9NUM3 307 aa12.11□□□□□ -0.47
HMGN4-201ENST00000377575 CELA1Q9UNI1 258 aa12.11□□□□□ -0.47
HMGN4-201ENST00000377575 TEX48A0A1B0GUV7 120 aa12.1□□□□□ -0.47
HMGN4-201ENST00000377575 INSP01308 110 aa12.1□□□□□ -0.47
HMGN4-201ENST00000377575 HBE1P02100 147 aa12.1□□□□□ -0.47
HMGN4-201ENST00000377575 PET100P0DJ07 73 aa12.1□□□□□ -0.47
HMGN4-201ENST00000377575 HIST1H1AQ02539 215 aaPredicted RBP12.1□□□□□ -0.47
HMGN4-201ENST00000377575 OR8A1Q8NGG7 326 aa12.1□□□□□ -0.47
HMGN4-201ENST00000377575 CHAC2Q8WUX2 184 aa12.1□□□□□ -0.47
HMGN4-201ENST00000377575 TMEM208Q9BTX3 173 aa12.1□□□□□ -0.47
HMGN4-201ENST00000377575 PXMP4Q9Y6I8 212 aa12.1□□□□□ -0.47
HMGN4-201ENST00000377575 IGLL5B9A064 214 aa12.09□□□□□ -0.47
HMGN4-201ENST00000377575 BOLA2-SMG1P6H3BVE0 249 aa12.09□□□□□ -0.47
HMGN4-201ENST00000377575 SPART-AS1P0CW21 52 aa12.09□□□□□ -0.47
HMGN4-201ENST00000377575 H2BFSP57053 126 aa12.09□□□□□ -0.47
HMGN4-201ENST00000377575 SPINK13Q1W4C9 94 aa12.09□□□□□ -0.47
HMGN4-201ENST00000377575 MORN5Q5VZ52 161 aa12.09□□□□□ -0.47
HMGN4-201ENST00000377575 LGALS9CQ6DKI2 356 aa12.09□□□□□ -0.47
HMGN4-201ENST00000377575 OR5C1Q8NGR4 320 aa12.09□□□□□ -0.47
HMGN4-201ENST00000377575 NPCDR1Q9BY65 106 aa12.09□□□□□ -0.47
HMGN4-201ENST00000377575 ZNF331Q9NQX6 463 aaPredicted RBP12.09□□□□□ -0.47
HMGN4-201ENST00000377575 PPP1R14DQ9NXH3 145 aa12.09□□□□□ -0.47
HMGN4-201ENST00000377575 OR5AC2Q9NZP5 309 aa12.09□□□□□ -0.47
HMGN4-201ENST00000377575 M0R2Z0 102 aa12.08□□□□□ -0.48
HMGN4-201ENST00000377575 IGLC2P0DOY2 106 aa12.08□□□□□ -0.48
HMGN4-201ENST00000377575 EMP1P54849 157 aa12.08□□□□□ -0.48
HMGN4-201ENST00000377575 RHOBP62745 196 aa12.08□□□□□ -0.48
HMGN4-201ENST00000377575 NHLH2Q02577 135 aa12.08□□□□□ -0.48
HMGN4-201ENST00000377575 GUK1Q16774 197 aa12.08□□□□□ -0.48
HMGN4-201ENST00000377575 RRN3P1Q2M238 152 aa12.08□□□□□ -0.48
HMGN4-201ENST00000377575 C12orf74Q32Q52 190 aa12.08□□□□□ -0.48
HMGN4-201ENST00000377575 C1orf158Q8N1D5 194 aa12.08□□□□□ -0.48
HMGN4-201ENST00000377575 PPP1R1CQ8WVI7 109 aa12.08□□□□□ -0.48
HMGN4-201ENST00000377575 RPUSD4Q96CM3 377 aaKnown RBP12.08□□□□□ -0.48
HMGN4-201ENST00000377575 KCNIP2Q9NS61 270 aa12.08□□□□□ -0.48
HMGN4-201ENST00000377575 LOC102723971A0A1B0GUV8 181 aa12.07□□□□□ -0.48
HMGN4-201ENST00000377575 DEFB131BA0A096LNP1 70 aa12.06□□□□□ -0.48
HMGN4-201ENST00000377575 H0YIZ8 118 aa12.06□□□□□ -0.48
HMGN4-201ENST00000377575 SLC17A3O00476 420 aa12.06□□□□□ -0.48
HMGN4-201ENST00000377575 SNRPCP09234 159 aaKnown RBP12.06□□□□□ -0.48
HMGN4-201ENST00000377575 CLINT1Q14677 625 aa12.06□□□□□ -0.48
HMGN4-201ENST00000377575 ZNF767PQ75MW2 155 aa12.06□□□□□ -0.48
HMGN4-201ENST00000377575 BAP18Q8IXM2 172 aa12.06□□□□□ -0.48
HMGN4-201ENST00000377575 THAP6Q8TBB0 222 aa12.06□□□□□ -0.48
HMGN4-201ENST00000377575 TRAV5A0A0B4J249 113 aa12.05□□□□□ -0.48
HMGN4-201ENST00000377575 H3BTX0 84 aa12.05□□□□□ -0.48
HMGN4-201ENST00000377575 CRXO43186 299 aaPredicted RBP12.05□□□□□ -0.48
HMGN4-201ENST00000377575 ZNF253O75346 499 aa12.05□□□□□ -0.48
HMGN4-201ENST00000377575 OR10J6PQ8NGY7 276 aa12.05□□□□□ -0.48
HMGN4-201ENST00000377575 RNF126Q9BV68 326 aa12.05□□□□□ -0.48
HMGN4-201ENST00000377575 DKK2Q9UBU2 259 aa12.05□□□□□ -0.48
HMGN4-201ENST00000377575 IGHV4-4A0A075B6R2 117 aa12.04□□□□□ -0.48
HMGN4-201ENST00000377575 H3BQ15 152 aa12.04□□□□□ -0.48
HMGN4-201ENST00000377575 MPC2O95563 127 aa12.04□□□□□ -0.48
HMGN4-201ENST00000377575 FAM222AQ5U5X8 452 aa12.04□□□□□ -0.48
HMGN4-201ENST00000377575 TMEM256Q8N2U0 113 aa12.04□□□□□ -0.48
HMGN4-201ENST00000377575 SAT2Q96F10 170 aaPredicted RBP12.04□□□□□ -0.48
HMGN4-201ENST00000377575 NIPSNAP3BQ9BS92 247 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms