RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 FUT9Q9Y231 359 aa13.28□□□□□ -0.28
PDLIM7-202ENST00000355841 H3BQ15 152 aa13.27□□□□□ -0.29
PDLIM7-202ENST00000355841 FRMD6-AS1P0C7T7 363 aa13.27□□□□□ -0.29
PDLIM7-202ENST00000355841 FAM122CQ6P4D5 195 aa13.27□□□□□ -0.29
PDLIM7-202ENST00000355841 OR10G4Q8NGN3 311 aa13.27□□□□□ -0.29
PDLIM7-202ENST00000355841 OR10G9Q8NGN4 311 aa13.27□□□□□ -0.29
PDLIM7-202ENST00000355841 OR10G7Q8NGN6 311 aa13.27□□□□□ -0.29
PDLIM7-202ENST00000355841 PCNPQ8WW12 178 aaKnown RBP13.27□□□□□ -0.29
PDLIM7-202ENST00000355841 FAM167A-AS1Q96KT0 104 aa13.27□□□□□ -0.29
PDLIM7-202ENST00000355841 HMGB3O15347 200 aaKnown RBP13.26□□□□□ -0.29
PDLIM7-202ENST00000355841 PRB4P10163 310 aaPredicted RBP13.26□□□□□ -0.29
PDLIM7-202ENST00000355841 DEFB1P60022 68 aa13.26□□□□□ -0.29
PDLIM7-202ENST00000355841 ALKAL2Q6UX46 152 aa13.26□□□□□ -0.29
PDLIM7-202ENST00000355841 C16orf92Q96LL3 132 aa13.26□□□□□ -0.29
PDLIM7-202ENST00000355841 RNF24Q9Y225 148 aa13.26□□□□□ -0.29
PDLIM7-202ENST00000355841 IGLC2P0DOY2 106 aa13.25□□□□□ -0.29
PDLIM7-202ENST00000355841 SNRPD3P62318 126 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-202ENST00000355841 RHOBP62745 196 aa13.25□□□□□ -0.29
PDLIM7-202ENST00000355841 SERF2P84101 59 aa13.25□□□□□ -0.29
PDLIM7-202ENST00000355841 RNF182Q8N6D2 247 aa13.25□□□□□ -0.29
PDLIM7-202ENST00000355841 PHYHIPLQ96FC7 376 aa13.25□□□□□ -0.29
PDLIM7-202ENST00000355841 C20orf173Q96LM9 149 aa13.25□□□□□ -0.29
PDLIM7-202ENST00000355841 MRPL32Q9BYC8 188 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-202ENST00000355841 A0A087X0K7 114 aa13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 TRAV8-2A0A0B4J237 113 aa13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 RBMY1BA6NDE4 496 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 RBMY1EA6NEQ0 496 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 KNCNA6PVL3 124 aa13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 SLC17A3O00476 420 aa13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 OR10J4P0C629 311 aa13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 RBMY1DP0C7P1 496 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 HLA-DMBP28068 263 aa13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 RPP25LQ8N5L8 163 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 FAM110AQ9BQ89 295 aa13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 RPRMQ9NS64 109 aa13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 ZNF586Q9NXT0 402 aa13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 A0A1W2PPV4 95 aa13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 ISLRO14498 428 aa13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 SPP1P10451 314 aa13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 MEOX2P50222 304 aa13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 ASCL2Q99929 193 aa13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 HRH4Q9H3N8 390 aa13.24□□□□□ -0.29
PDLIM7-202ENST00000355841 LOC105371267A0A1B0GV96 52 aa13.23□□□□□ -0.29
PDLIM7-202ENST00000355841 OR7C2O60412 319 aa13.23□□□□□ -0.29
PDLIM7-202ENST00000355841 ID1P41134 155 aa13.23□□□□□ -0.29
PDLIM7-202ENST00000355841 PSMB3P49720 205 aa13.23□□□□□ -0.29
PDLIM7-202ENST00000355841 BLNKQ8WV28 456 aa13.23□□□□□ -0.29
PDLIM7-202ENST00000355841 ZNF503Q96F45 646 aa13.23□□□□□ -0.29
PDLIM7-202ENST00000355841 OR51M1Q9H341 326 aa13.23□□□□□ -0.29
PDLIM7-202ENST00000355841 TMEM14CQ9P0S9 112 aa13.23□□□□□ -0.29
PDLIM7-202ENST00000355841 RPL35AP18077 110 aaKnown RBP13.22□□□□□ -0.29
PDLIM7-202ENST00000355841 CMC4P56277 68 aaPredicted RBP13.22□□□□□ -0.29
PDLIM7-202ENST00000355841 TMEM41BQ5BJD5 291 aa13.22□□□□□ -0.29
PDLIM7-202ENST00000355841 ACTL10Q5JWF8 245 aa13.22□□□□□ -0.29
PDLIM7-202ENST00000355841 SSX7Q7RTT5 188 aa13.22□□□□□ -0.29
PDLIM7-202ENST00000355841 PAXXQ9BUH6 204 aa13.22□□□□□ -0.29
PDLIM7-202ENST00000355841 PLA2G2EQ9NZK7 142 aa13.22□□□□□ -0.29
PDLIM7-202ENST00000355841 A8MZ25 164 aa13.21□□□□□ -0.29
PDLIM7-202ENST00000355841 MBP02144 154 aa13.21□□□□□ -0.29
PDLIM7-202ENST00000355841 CDC34P49427 236 aaPredicted RBP13.21□□□□□ -0.29
PDLIM7-202ENST00000355841 AKR1C8PQ5T2L2 129 aa13.21□□□□□ -0.29
PDLIM7-202ENST00000355841 BAP18Q8IXM2 172 aa13.21□□□□□ -0.29
PDLIM7-202ENST00000355841 RAB24Q969Q5 203 aa13.21□□□□□ -0.29
PDLIM7-202ENST00000355841 SAT2Q96F10 170 aaPredicted RBP13.21□□□□□ -0.29
PDLIM7-202ENST00000355841 F6UB75 175 aa13.21□□□□□ -0.3
PDLIM7-202ENST00000355841 HIST1H1EP10412 219 aaKnown RBP13.21□□□□□ -0.3
PDLIM7-202ENST00000355841 KHDC3LQ587J8 217 aa13.21□□□□□ -0.3
PDLIM7-202ENST00000355841 GDF5OSQ5U4N7 250 aa13.21□□□□□ -0.3
PDLIM7-202ENST00000355841 LCN15Q6UWW0 184 aa13.21□□□□□ -0.3
PDLIM7-202ENST00000355841 SBSPONQ8IVN8 264 aa13.21□□□□□ -0.3
PDLIM7-202ENST00000355841 RNF141Q8WVD5 230 aa13.21□□□□□ -0.3
PDLIM7-202ENST00000355841 TMED6Q8WW62 240 aa13.21□□□□□ -0.3
PDLIM7-202ENST00000355841 FXYD5Q96DB9 178 aa13.21□□□□□ -0.3
PDLIM7-202ENST00000355841 ZNF331Q9NQX6 463 aaPredicted RBP13.21□□□□□ -0.3
PDLIM7-202ENST00000355841 TRBV19A0A075B6N1 114 aa13.2□□□□□ -0.3
PDLIM7-202ENST00000355841 SCO1O75880 301 aa13.2□□□□□ -0.3
PDLIM7-202ENST00000355841 TPT1P13693 172 aaKnown RBP13.2□□□□□ -0.3
PDLIM7-202ENST00000355841 FHITP49789 147 aa13.2□□□□□ -0.3
PDLIM7-202ENST00000355841 TAS2R45P59539 299 aa13.2□□□□□ -0.3
PDLIM7-202ENST00000355841 ZNF726P1Q15940 193 aa13.2□□□□□ -0.3
PDLIM7-202ENST00000355841 LINC00322Q6ZN03 302 aaPredicted RBP13.2□□□□□ -0.3
PDLIM7-202ENST00000355841 NDUFB4O95168 129 aa13.19□□□□□ -0.3
PDLIM7-202ENST00000355841 NBEAP1P0C6P0 100 aa13.19□□□□□ -0.3
PDLIM7-202ENST00000355841 UBE2L3P68036 154 aaKnown RBP13.19□□□□□ -0.3
PDLIM7-202ENST00000355841 SAMD13Q5VXD3 122 aa13.19□□□□□ -0.3
PDLIM7-202ENST00000355841 STOML3Q8TAV4 291 aa13.19□□□□□ -0.3
PDLIM7-202ENST00000355841 ACTR3CQ9C0K3 210 aaPredicted RBP13.19□□□□□ -0.3
PDLIM7-202ENST00000355841 AGRNO00468 2067 aa13.19□□□□□ -0.3
PDLIM7-202ENST00000355841 LOC102724200A0A096LPH7 203 aaPredicted RBP13.18□□□□□ -0.3
PDLIM7-202ENST00000355841 ZNF705FA8MVS1 300 aaPredicted RBP13.18□□□□□ -0.3
PDLIM7-202ENST00000355841 SEC11BP0C7V7 166 aa13.18□□□□□ -0.3
PDLIM7-202ENST00000355841 ZNF705DP0CH99 300 aaPredicted RBP13.18□□□□□ -0.3
PDLIM7-202ENST00000355841 ZNF705BP0CI00 300 aaPredicted RBP13.18□□□□□ -0.3
PDLIM7-202ENST00000355841 ARL14EPLP0DKL9 152 aa13.18□□□□□ -0.3
PDLIM7-202ENST00000355841 EIF5AP63241 154 aaKnown RBP13.18□□□□□ -0.3
PDLIM7-202ENST00000355841 GUK1Q16774 197 aa13.18□□□□□ -0.3
PDLIM7-202ENST00000355841 HAGHQ16775 308 aa13.18□□□□□ -0.3
PDLIM7-202ENST00000355841 STHQ8IWL8 128 aa13.18□□□□□ -0.3
PDLIM7-202ENST00000355841 ZNF738Q8NE65 137 aa13.18□□□□□ -0.3
PDLIM7-202ENST00000355841 B9D2Q9BPU9 175 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms