RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 GPR82Q96P67 336 aa11.92□□□□□ -0.5
PDLIM7-201ENST00000355572 MGAT4CQ9UBM8 478 aa11.92□□□□□ -0.5
PDLIM7-201ENST00000355572 DEFB131BA0A096LNP1 70 aa11.91□□□□□ -0.5
PDLIM7-201ENST00000355572 SLC17A3O00476 420 aa11.91□□□□□ -0.5
PDLIM7-201ENST00000355572 FAM222AQ5U5X8 452 aa11.91□□□□□ -0.5
PDLIM7-201ENST00000355572 SPATA31B1PQ5VZV4 182 aa11.91□□□□□ -0.5
PDLIM7-201ENST00000355572 MIC13Q5XKP0 118 aa11.91□□□□□ -0.5
PDLIM7-201ENST00000355572 DKK2Q9UBU2 259 aa11.91□□□□□ -0.5
PDLIM7-201ENST00000355572 NACAE9PAV3 2078 aa11.91□□□□□ -0.5
PDLIM7-201ENST00000355572 TRAV12-2A0A075B6T6 113 aa11.9□□□□□ -0.5
PDLIM7-201ENST00000355572 TRAV5A0A0B4J249 113 aa11.9□□□□□ -0.5
PDLIM7-201ENST00000355572 PRAF2O60831 178 aa11.9□□□□□ -0.5
PDLIM7-201ENST00000355572 SIX6O95475 246 aa11.9□□□□□ -0.5
PDLIM7-201ENST00000355572 RPL7P18124 248 aaKnown RBP11.9□□□□□ -0.5
PDLIM7-201ENST00000355572 CAV2P51636 162 aa11.9□□□□□ -0.5
PDLIM7-201ENST00000355572 KIR3DS1Q14943 382 aa11.9□□□□□ -0.5
PDLIM7-201ENST00000355572 OPCMLQ14982 345 aa11.9□□□□□ -0.5
PDLIM7-201ENST00000355572 LINC00305Q7Z4B0 112 aa11.9□□□□□ -0.5
PDLIM7-201ENST00000355572 AKAP14Q86UN6 197 aa11.9□□□□□ -0.5
PDLIM7-201ENST00000355572 ZNF738Q8NE65 137 aa11.9□□□□□ -0.5
PDLIM7-201ENST00000355572 IGF2BP2-AS1Q96M15 143 aa11.9□□□□□ -0.5
PDLIM7-201ENST00000355572 YTHDF2Q9Y5A9 579 aaKnown RBP11.9□□□□□ -0.5
PDLIM7-201ENST00000355572 RFNGQ9Y644 331 aa11.9□□□□□ -0.5
PDLIM7-201ENST00000355572 LOC102723971A0A1B0GUV8 181 aa11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 ZNF705GA8MUZ8 300 aaPredicted RBP11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 PRAC2D3DTV9 90 aa11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 INMT-MINDY4F8WBC2 141 aa11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 H3BQ15 152 aa11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 L7N2F9 121 aa11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 GOSR2O14653 212 aa11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 AMBPP02760 352 aa11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 S100A10P60903 97 aa11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 VAMP2P63027 116 aa11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 PSG3Q16557 428 aa11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 VWC2Q2TAL6 325 aa11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 RNF126Q9BV68 326 aa11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 GGACTQ9BVM4 153 aa11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 PARD6GQ9BYG4 376 aaPredicted RBP11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 WDR83OSQ9Y284 106 aa11.89□□□□□ -0.51
PDLIM7-201ENST00000355572 PLAC8L1A1L4L8 177 aa11.88□□□□□ -0.51
PDLIM7-201ENST00000355572 SMIM9A6NGZ8 99 aa11.88□□□□□ -0.51
PDLIM7-201ENST00000355572 AZU1P20160 251 aa11.88□□□□□ -0.51
PDLIM7-201ENST00000355572 TCTAP57738 103 aa11.88□□□□□ -0.51
PDLIM7-201ENST00000355572 HIST1H1AQ02539 215 aaPredicted RBP11.88□□□□□ -0.51
PDLIM7-201ENST00000355572 ZNF546Q86UE3 836 aa11.88□□□□□ -0.51
PDLIM7-201ENST00000355572 TMEM252Q8N6L7 170 aa11.88□□□□□ -0.51
PDLIM7-201ENST00000355572 OR8A1Q8NGG7 326 aa11.88□□□□□ -0.51
PDLIM7-201ENST00000355572 ZNF331Q9NQX6 463 aaPredicted RBP11.88□□□□□ -0.51
PDLIM7-201ENST00000355572 LYRM2Q9NU23 88 aaPredicted RBP11.88□□□□□ -0.51
PDLIM7-201ENST00000355572 GOLT1BQ9Y3E0 138 aa11.88□□□□□ -0.51
PDLIM7-201ENST00000355572 UBE2L5PA0A1B0GUS4 154 aa11.87□□□□□ -0.51
PDLIM7-201ENST00000355572 H0YIZ8 118 aa11.87□□□□□ -0.51
PDLIM7-201ENST00000355572 SPART-AS1P0CW21 52 aa11.87□□□□□ -0.51
PDLIM7-201ENST00000355572 IGLC2P0DOY2 106 aa11.87□□□□□ -0.51
PDLIM7-201ENST00000355572 CAMLGP49069 296 aa11.87□□□□□ -0.51
PDLIM7-201ENST00000355572 SAMD13Q5VXD3 122 aa11.87□□□□□ -0.51
PDLIM7-201ENST00000355572 HBE1P02100 147 aa11.86□□□□□ -0.51
PDLIM7-201ENST00000355572 SAT2Q96F10 170 aaPredicted RBP11.86□□□□□ -0.51
PDLIM7-201ENST00000355572 ALG5Q9Y673 324 aa11.86□□□□□ -0.51
PDLIM7-201ENST00000355572 BOLA2-SMG1P6H3BVE0 249 aa11.85□□□□□ -0.51
PDLIM7-201ENST00000355572 COX7A2P2O60397 106 aa11.85□□□□□ -0.51
PDLIM7-201ENST00000355572 DUSP14O95147 198 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-201ENST00000355572 SULT1A1P50225 295 aa11.85□□□□□ -0.51
PDLIM7-201ENST00000355572 NHLH2Q02577 135 aa11.85□□□□□ -0.51
PDLIM7-201ENST00000355572 FCN2Q15485 313 aa11.85□□□□□ -0.51
PDLIM7-201ENST00000355572 RRN3P1Q2M238 152 aa11.85□□□□□ -0.51
PDLIM7-201ENST00000355572 GCSAMLQ5JQS6 135 aa11.85□□□□□ -0.51
PDLIM7-201ENST00000355572 C10orf113Q5VZT2 155 aa11.85□□□□□ -0.51
PDLIM7-201ENST00000355572 RPUSD4Q96CM3 377 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-201ENST00000355572 NIPSNAP3BQ9BS92 247 aa11.85□□□□□ -0.51
PDLIM7-201ENST00000355572 UQCC1Q9NVA1 299 aa11.85□□□□□ -0.51
PDLIM7-201ENST00000355572 OR5AC2Q9NZP5 309 aa11.85□□□□□ -0.51
PDLIM7-201ENST00000355572 TMEM189A5PLL7 270 aa11.84□□□□□ -0.51
PDLIM7-201ENST00000355572 INSP01308 110 aa11.84□□□□□ -0.51
PDLIM7-201ENST00000355572 PXDC1Q5TGL8 231 aa11.84□□□□□ -0.51
PDLIM7-201ENST00000355572 ZNF586Q9NXT0 402 aa11.84□□□□□ -0.51
PDLIM7-201ENST00000355572 HTN3P15516 51 aa11.83□□□□□ -0.52
PDLIM7-201ENST00000355572 LCN15Q6UWW0 184 aa11.83□□□□□ -0.52
PDLIM7-201ENST00000355572 SLC39A9Q9NUM3 307 aa11.83□□□□□ -0.52
PDLIM7-201ENST00000355572 FGF7P21781 194 aa11.82□□□□□ -0.52
PDLIM7-201ENST00000355572 S100A7P31151 101 aa11.82□□□□□ -0.52
PDLIM7-201ENST00000355572 RPL29P47914 159 aaKnown RBP11.82□□□□□ -0.52
PDLIM7-201ENST00000355572 RHOBP62745 196 aa11.82□□□□□ -0.52
PDLIM7-201ENST00000355572 BAXQ07812 192 aa11.82□□□□□ -0.52
PDLIM7-201ENST00000355572 BPIFA4PQ86YQ2 179 aa11.82□□□□□ -0.52
PDLIM7-201ENST00000355572 TCTE3Q8IZS6 198 aa11.82□□□□□ -0.52
PDLIM7-201ENST00000355572 LRRC20Q8TCA0 184 aa11.82□□□□□ -0.52
PDLIM7-201ENST00000355572 TMEM208Q9BTX3 173 aa11.82□□□□□ -0.52
PDLIM7-201ENST00000355572 GPN1Q9HCN4 374 aaPredicted RBP11.82□□□□□ -0.52
PDLIM7-201ENST00000355572 DNAJC4Q9NNZ3 241 aa11.82□□□□□ -0.52
PDLIM7-201ENST00000355572 PXMP4Q9Y6I8 212 aa11.82□□□□□ -0.52
PDLIM7-201ENST00000355572 NDUFB4O95168 129 aa11.81□□□□□ -0.52
PDLIM7-201ENST00000355572 CXCL2P19875 107 aa11.81□□□□□ -0.52
PDLIM7-201ENST00000355572 PVALBP20472 110 aaPredicted RBP11.81□□□□□ -0.52
PDLIM7-201ENST00000355572 H2BFSP57053 126 aa11.81□□□□□ -0.52
PDLIM7-201ENST00000355572 B2MP61769 119 aa11.81□□□□□ -0.52
PDLIM7-201ENST00000355572 LRRC37A5PQ49AS3 106 aa11.81□□□□□ -0.52
PDLIM7-201ENST00000355572 NDUFAF3Q9BU61 184 aa11.81□□□□□ -0.52
PDLIM7-201ENST00000355572 M0R3E3 92 aa11.8□□□□□ -0.52
PDLIM7-201ENST00000355572 PYYP10082 97 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms