RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SNHG12Q9BXW3 62 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 UBE2E1P51965 193 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 GAS1P54826 345 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 LINC01559Q495D7 138 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 TMEM190Q8WZ59 177 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 IGKV1-5P01602 117 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 IGHG3P01860 377 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 GLRX5Q86SX6 157 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 DOCK6Q96HP0 2047 aa10.72□□□□□ -0.69
COL1A1-201ENST00000225964 AMBPP02760 352 aa10.72□□□□□ -0.69
COL1A1-201ENST00000225964 RBMY1FQ15415 496 aaKnown RBP10.72□□□□□ -0.69
COL1A1-201ENST00000225964 C8orf49Q96NF6 230 aa10.72□□□□□ -0.69
COL1A1-201ENST00000225964 MCRIP2Q9BUT9 160 aaKnown RBP10.72□□□□□ -0.69
COL1A1-201ENST00000225964 LIME1Q9H400 295 aa10.72□□□□□ -0.69
COL1A1-201ENST00000225964 A0A096LPF7 62 aa10.72□□□□□ -0.69
COL1A1-201ENST00000225964 TNFRSF6BO95407 300 aa10.72□□□□□ -0.69
COL1A1-201ENST00000225964 B3GALT5-AS1P59052 145 aa10.72□□□□□ -0.69
COL1A1-201ENST00000225964 NAA38Q9BRA0 125 aaKnown RBP10.72□□□□□ -0.69
COL1A1-201ENST00000225964 RFNGQ9Y644 331 aa10.72□□□□□ -0.69
COL1A1-201ENST00000225964 MST1LQ2TV78 715 aa10.72□□□□□ -0.69
COL1A1-201ENST00000225964 DNAJC30Q96LL9 226 aa10.72□□□□□ -0.69
COL1A1-201ENST00000225964 RP1P56715 2156 aa10.72□□□□□ -0.69
COL1A1-201ENST00000225964 hDV102S1A0JD36 115 aa10.72□□□□□ -0.69
COL1A1-201ENST00000225964 MPZP25189 248 aa10.72□□□□□ -0.69
COL1A1-201ENST00000225964 PMVKQ15126 192 aa10.72□□□□□ -0.69
COL1A1-201ENST00000225964 MLANAQ16655 118 aa10.71□□□□□ -0.69
COL1A1-201ENST00000225964 IGHV2-70DA0A0C4DH43 119 aa10.71□□□□□ -0.69
COL1A1-201ENST00000225964 LYPD1Q8N2G4 141 aa10.71□□□□□ -0.69
COL1A1-201ENST00000225964 ZNF362Q5T0B9 420 aaPredicted RBP10.71□□□□□ -0.69
COL1A1-201ENST00000225964 YLPM1P49750 1951 aaKnown RBP10.71□□□□□ -0.7
COL1A1-201ENST00000225964 GAGE2AQ6NT46 116 aa10.71□□□□□ -0.7
COL1A1-201ENST00000225964 BCL6BQ8N143 479 aaPredicted RBP10.71□□□□□ -0.7
COL1A1-201ENST00000225964 RPRMLQ8N4K4 120 aa10.71□□□□□ -0.7
COL1A1-201ENST00000225964 LY6G5BQ8NDX9 201 aa10.71□□□□□ -0.7
COL1A1-201ENST00000225964 GUSBP1Q15486 140 aa10.71□□□□□ -0.7
COL1A1-201ENST00000225964 GAGE6Q13070 117 aa10.7□□□□□ -0.7
COL1A1-201ENST00000225964 AMN1Q8IY45 258 aa10.7□□□□□ -0.7
COL1A1-201ENST00000225964 RNASE2P10153 161 aaKnown RBP10.7□□□□□ -0.7
COL1A1-201ENST00000225964 ARMS2P0C7Q2 107 aa10.7□□□□□ -0.7
COL1A1-201ENST00000225964 RMI2Q96E14 147 aa10.7□□□□□ -0.7
COL1A1-201ENST00000225964 IGKV1-16P04430 117 aa10.7□□□□□ -0.7
COL1A1-201ENST00000225964 SRSF8Q9BRL6 282 aaKnown RBP10.7□□□□□ -0.7
COL1A1-201ENST00000225964 TICRRQ7Z2Z1 1910 aa10.7□□□□□ -0.7
COL1A1-201ENST00000225964 HIST1H2BKO60814 126 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 HIST1H2BJP06899 126 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 HIST1H2BOP23527 126 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 HIST1H2BBP33778 126 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 PFN2P35080 140 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 HIST1H2BDP58876 126 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 HIST1H2BCP62807 126 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 HIST2H2BEQ16778 126 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.69□□□□□ -0.7
COL1A1-201ENST00000225964 HIST1H2BHQ93079 126 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 SIGMAR1Q99720 223 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 HIST1H2BNQ99877 126 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 HIST1H2BMQ99879 126 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 KLHDC3Q9BQ90 382 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 ZNF581Q9P0T4 197 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 IGHV3-38A0A0C4DH36 116 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 C22orf46C9J442 243 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 ESPL1Q14674 2120 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 OCIAD2Q56VL3 154 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 C17orf82Q86X59 251 aaPredicted RBP10.69□□□□□ -0.7
COL1A1-201ENST00000225964 CABIN1Q9Y6J0 2220 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 TRAV12-2A0A075B6T6 113 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 CXCL1P09341 107 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 ESDP10768 282 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 SHANK2-AS3Q9BTD1 123 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 G3V318 75 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 VWC2Q2TAL6 325 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 TCTEX1D4Q5JR98 221 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 GBF1Q92538 1859 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 ANXA2RQ3ZCQ2 193 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 NMSQ5H8A3 153 aa10.69□□□□□ -0.7
COL1A1-201ENST00000225964 Q86TA4 180 aa10.68□□□□□ -0.7
COL1A1-201ENST00000225964 IGF2BP2-AS1Q96M15 143 aa10.68□□□□□ -0.7
COL1A1-201ENST00000225964 TRAV25A0A0B4J276 109 aa10.68□□□□□ -0.7
COL1A1-201ENST00000225964 CLPSL2Q6UWE3 100 aa10.68□□□□□ -0.7
COL1A1-201ENST00000225964 TMEM242Q9NWH2 141 aa10.68□□□□□ -0.7
COL1A1-201ENST00000225964 NDUFB8O95169 186 aa10.68□□□□□ -0.7
COL1A1-201ENST00000225964 TP53BP1Q12888 1972 aaPredicted RBP10.68□□□□□ -0.7
COL1A1-201ENST00000225964 A0A1W2PPI3 338 aa10.67□□□□□ -0.7
COL1A1-201ENST00000225964 RNF144BQ7Z419 303 aa10.67□□□□□ -0.7
COL1A1-201ENST00000225964 SEC16AO15027 2179 aa10.67□□□□□ -0.7
COL1A1-201ENST00000225964 TCF20Q9UGU0 1960 aaKnown RBP10.67□□□□□ -0.7
COL1A1-201ENST00000225964 A0A087X0K7 114 aa10.67□□□□□ -0.7
COL1A1-201ENST00000225964 J3QLI3 93 aa10.67□□□□□ -0.7
COL1A1-201ENST00000225964 CFHR2P36980 270 aa10.67□□□□□ -0.7
COL1A1-201ENST00000225964 C15orf62A8K5M9 175 aa10.67□□□□□ -0.7
COL1A1-201ENST00000225964 I3L3M4 83 aa10.67□□□□□ -0.7
COL1A1-201ENST00000225964 MAP1BP46821 2468 aaKnown RBP10.67□□□□□ -0.7
COL1A1-201ENST00000225964 TMEM14EPQ6UXP3 125 aa10.67□□□□□ -0.7
COL1A1-201ENST00000225964 TP53TG1Q9Y2A0 90 aa10.67□□□□□ -0.7
COL1A1-201ENST00000225964 ICE1Q9Y2F5 2266 aa10.67□□□□□ -0.7
COL1A1-201ENST00000225964 LTBP1Q14766 1721 aa10.67□□□□□ -0.7
COL1A1-201ENST00000225964 COL4A6Q14031 1691 aa10.66□□□□□ -0.7
COL1A1-201ENST00000225964 LINC01551Q86U37 167 aa10.66□□□□□ -0.7
COL1A1-201ENST00000225964 ZFAND6Q6FIF0 208 aa10.66□□□□□ -0.7
COL1A1-201ENST00000225964 TMEM75Q8N9X5 138 aa10.66□□□□□ -0.7
COL1A1-201ENST00000225964 ZNRF2Q8NHG8 242 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms