RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 MS4A6AQ9H2W1 248 aa12.84□□□□□ -0.35
RTN1-209ENST00000611068 VWC2LB2RUY7 222 aa12.84□□□□□ -0.35
RTN1-209ENST00000611068 GCHFRP30047 84 aa12.84□□□□□ -0.35
RTN1-209ENST00000611068 LOXL3P58215 753 aa12.84□□□□□ -0.35
RTN1-209ENST00000611068 FOXI2Q6ZQN5 318 aa12.84□□□□□ -0.35
RTN1-209ENST00000611068 ZNF645Q8N7E2 425 aa12.84□□□□□ -0.35
RTN1-209ENST00000611068 SPANXB1Q9NS25 103 aaPredicted RBP12.84□□□□□ -0.35
RTN1-209ENST00000611068 CTSZQ9UBR2 303 aa12.84□□□□□ -0.35
RTN1-209ENST00000611068 HELTA6NFD8 242 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 NDUFS7O75251 213 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 FABP2P12104 132 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 FCGR2BP31994 310 aaPredicted RBP12.83□□□□□ -0.36
RTN1-209ENST00000611068 G6PCP35575 357 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 FOXA3P55318 350 aaPredicted RBP12.83□□□□□ -0.36
RTN1-209ENST00000611068 WFDC2Q14508 124 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 IBA57Q5T440 356 aaKnown RBP12.83□□□□□ -0.36
RTN1-209ENST00000611068 TEX36Q5VZQ5 186 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 MIC13Q5XKP0 118 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 NHLRC2Q8NBF2 726 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 OR52E5Q8NH55 327 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 CACNG8Q8WXS5 425 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 RNF183Q96D59 192 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 C18orf15Q96N68 181 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 ZNF257Q9Y2Q1 563 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 CENPEQ02224 2701 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 ARHGAP32A7KAX9 2087 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 PROP1O75360 226 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 CAMPP49913 170 aa12.83□□□□□ -0.36
RTN1-209ENST00000611068 TIMM8BQ9Y5J9 83 aaPredicted RBP12.83□□□□□ -0.36
RTN1-209ENST00000611068 FGF6P10767 208 aa12.82□□□□□ -0.36
RTN1-209ENST00000611068 GPR12P47775 334 aa12.82□□□□□ -0.36
RTN1-209ENST00000611068 BRWD1-AS2P59051 145 aa12.82□□□□□ -0.36
RTN1-209ENST00000611068 SH2D6Q7Z4S9 175 aa12.82□□□□□ -0.36
RTN1-209ENST00000611068 UBTD1Q9HAC8 227 aa12.82□□□□□ -0.36
RTN1-209ENST00000611068 WDR83OSQ9Y284 106 aa12.82□□□□□ -0.36
RTN1-209ENST00000611068 SPG11Q96JI7 2443 aa12.82□□□□□ -0.36
RTN1-209ENST00000611068 MALRD1Q5VYJ5 2156 aa12.82□□□□□ -0.36
RTN1-209ENST00000611068 FAM90A26D6RGX4 464 aa12.82□□□□□ -0.36
RTN1-209ENST00000611068 INSL3P51460 131 aa12.82□□□□□ -0.36
RTN1-209ENST00000611068 EFNB3Q15768 340 aa12.82□□□□□ -0.36
RTN1-209ENST00000611068 VKORC1L1Q8N0U8 176 aa12.82□□□□□ -0.36
RTN1-209ENST00000611068 TEX45Q8NA69 505 aa12.82□□□□□ -0.36
RTN1-209ENST00000611068 KBTBD11-OT1A0A1B0GTJ5 212 aa12.81□□□□□ -0.36
RTN1-209ENST00000611068 A0A1W2PRE2 83 aa12.81□□□□□ -0.36
RTN1-209ENST00000611068 IGLV2-8P01709 118 aa12.81□□□□□ -0.36
RTN1-209ENST00000611068 FA2HQ7L5A8 372 aa12.81□□□□□ -0.36
RTN1-209ENST00000611068 MRPL16Q9NX20 251 aaKnown RBP12.81□□□□□ -0.36
RTN1-209ENST00000611068 DSCAML1Q8TD84 2053 aa12.81□□□□□ -0.36
RTN1-209ENST00000611068 CT45A1Q5HYN5 189 aa12.81□□□□□ -0.36
RTN1-209ENST00000611068 SAMD5Q5TGI4 173 aa12.81□□□□□ -0.36
RTN1-209ENST00000611068 CT45A3Q8NHU0 189 aa12.81□□□□□ -0.36
RTN1-209ENST00000611068 JPT1Q9UK76 154 aa12.81□□□□□ -0.36
RTN1-209ENST00000611068 CRYGCP07315 174 aa12.8□□□□□ -0.36
RTN1-209ENST00000611068 TM4SF20Q53R12 229 aa12.8□□□□□ -0.36
RTN1-209ENST00000611068 TMEM200BQ69YZ2 307 aa12.8□□□□□ -0.36
RTN1-209ENST00000611068 FCGR3BO75015 233 aa12.8□□□□□ -0.36
RTN1-209ENST00000611068 CGB3P0DN86 165 aa12.8□□□□□ -0.36
RTN1-209ENST00000611068 CGB7P0DN87 165 aa12.8□□□□□ -0.36
RTN1-209ENST00000611068 ZNF138P52744 262 aa12.8□□□□□ -0.36
RTN1-209ENST00000611068 TIGITQ495A1 244 aa12.8□□□□□ -0.36
RTN1-209ENST00000611068 SSMEM1Q8WWF3 244 aa12.8□□□□□ -0.36
RTN1-209ENST00000611068 FAM208BQ5VWN6 2430 aa12.8□□□□□ -0.36
RTN1-209ENST00000611068 TANC2Q9HCD6 1990 aa12.8□□□□□ -0.36
RTN1-209ENST00000611068 OR11H12B2RN74 326 aa12.79□□□□□ -0.36
RTN1-209ENST00000611068 NDUFB3O43676 98 aa12.79□□□□□ -0.36
RTN1-209ENST00000611068 OR11H1Q8NG94 326 aa12.79□□□□□ -0.36
RTN1-209ENST00000611068 OR11H2Q8NH07 326 aa12.79□□□□□ -0.36
RTN1-209ENST00000611068 WIPF2Q8TF74 440 aaPredicted RBP12.79□□□□□ -0.36
RTN1-209ENST00000611068 LIN7CQ9NUP9 197 aaKnown RBP12.79□□□□□ -0.36
RTN1-209ENST00000611068 TRBV7-9A0A0J9YWB2 115 aa12.79□□□□□ -0.36
RTN1-209ENST00000611068 ETDBQ3ZM63 59 aa12.79□□□□□ -0.36
RTN1-209ENST00000611068 NUP35Q8NFH5 326 aa12.79□□□□□ -0.36
RTN1-209ENST00000611068 MAP1LC3CQ9BXW4 147 aa12.79□□□□□ -0.36
RTN1-209ENST00000611068 ZNF355PQ9NSJ1 428 aa12.79□□□□□ -0.36
RTN1-209ENST00000611068 PIGBOS1A0A0B4J2F0 54 aa12.78□□□□□ -0.36
RTN1-209ENST00000611068 ARPC1AQ92747 370 aa12.78□□□□□ -0.36
RTN1-209ENST00000611068 MGST2Q99735 147 aa12.78□□□□□ -0.36
RTN1-209ENST00000611068 IFI27L2Q9H2X8 130 aa12.78□□□□□ -0.36
RTN1-209ENST00000611068 C15orf62A8K5M9 175 aa12.78□□□□□ -0.36
RTN1-209ENST00000611068 OR2J3O76001 311 aa12.78□□□□□ -0.36
RTN1-209ENST00000611068 CR1LQ2VPA4 569 aa12.78□□□□□ -0.36
RTN1-209ENST00000611068 CELSR1Q9NYQ6 3014 aa12.78□□□□□ -0.36
RTN1-209ENST00000611068 hADV38S2A0JD32 116 aa12.77□□□□□ -0.36
RTN1-209ENST00000611068 NCR2O95944 276 aa12.77□□□□□ -0.36
RTN1-209ENST00000611068 TRAT1Q6PIZ9 186 aa12.77□□□□□ -0.36
RTN1-209ENST00000611068 CELSR2Q9HCU4 2923 aa12.77□□□□□ -0.36
RTN1-209ENST00000611068 J3QR89 54 aa12.77□□□□□ -0.37
RTN1-209ENST00000611068 SAA2P0DJI9 122 aaPredicted RBP12.77□□□□□ -0.37
RTN1-209ENST00000611068 PDLIM3Q53GG5 364 aaPredicted RBP12.77□□□□□ -0.37
RTN1-209ENST00000611068 MTURNQ8N3F0 131 aa12.77□□□□□ -0.37
RTN1-209ENST00000611068 VGLL1Q99990 258 aa12.77□□□□□ -0.37
RTN1-209ENST00000611068 GGTLC1Q9BX51 225 aa12.77□□□□□ -0.37
RTN1-209ENST00000611068 IDI2-AS1Q9NZ38 188 aa12.77□□□□□ -0.37
RTN1-209ENST00000611068 CNIH1O95406 144 aa12.76□□□□□ -0.37
RTN1-209ENST00000611068 EIF4EBP1Q13541 118 aaPredicted RBP12.76□□□□□ -0.37
RTN1-209ENST00000611068 TREML4Q6UXN2 200 aa12.76□□□□□ -0.37
RTN1-209ENST00000611068 ZNF418Q8TF45 676 aaPredicted RBP12.76□□□□□ -0.37
RTN1-209ENST00000611068 DUTP33316 252 aaKnown RBP12.76□□□□□ -0.37
RTN1-209ENST00000611068 OPRK1P41145 380 aa12.76□□□□□ -0.37
RTN1-209ENST00000611068 ODF1Q14990 250 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms