RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 POM121L12Q8N7R1 296 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 OR5AP2Q8NGF4 316 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 C1QTNF4Q9BXJ3 329 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 NXF2Q9GZY0 626 aaKnown RBP4.03□□□□□ -1.76
DNMT1-220ENST00000589351 NAA50Q9GZZ1 169 aaKnown RBP4.03□□□□□ -1.76
DNMT1-220ENST00000589351 MS4A6AQ9H2W1 248 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 IFT46Q9NQC8 304 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 TMEM14BQ9NUH8 114 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 NDUFB11Q9NX14 153 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 RABAC1Q9UI14 185 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 IGHV3OR16-13A0A075B7E8 117 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 DEFB131BA0A096LNP1 70 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 IGHV3-49A0A0A0MS15 119 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 IGHV3-74A0A0B4J1X5 117 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 IGHV4-28A0A0C4DH34 117 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 K7EN84 100 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 FGF9P31371 208 aaPredicted RBP4.02□□□□□ -1.77
DNMT1-220ENST00000589351 G6PCP35575 357 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 AP2S1P53680 142 aaPredicted RBP4.02□□□□□ -1.77
DNMT1-220ENST00000589351 XGP55808 180 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 LGALS9BQ3B8N2 356 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 LEMD1Q68G75 181 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 LPCAT3Q6P1A2 487 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 UBE2DNLQ8IWF7 75 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 Q8NAQ8 132 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 OR6F1Q8NGZ6 308 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 RPL36ALQ969Q0 106 aaKnown RBP4.02□□□□□ -1.77
DNMT1-220ENST00000589351 METTL26Q96S19 204 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 VSIRQ9H7M9 311 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 RHBDL2Q9NX52 303 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 EHFQ9NZC4 300 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 SSR3Q9UNL2 185 aa4.02□□□□□ -1.77
DNMT1-220ENST00000589351 ZNF705EA8MWA4 302 aaPredicted RBP4.01□□□□□ -1.77
DNMT1-220ENST00000589351 I3L2K1 104 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 M0R2N4 97 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 CORTO00230 105 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 GPR31O00270 319 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 GATCO43716 136 aaKnown RBP4.01□□□□□ -1.77
DNMT1-220ENST00000589351 PGLYRP1O75594 196 aaPredicted RBP4.01□□□□□ -1.77
DNMT1-220ENST00000589351 ATP5LO75964 103 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 ATG12O94817 140 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 MT-CO2P00403 227 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 AMBPP02760 352 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 RBMY1A1P0DJD3 496 aaKnown RBP4.01□□□□□ -1.77
DNMT1-220ENST00000589351 RBMY1CP0DJD4 496 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 GNRHRP30968 328 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 TAS2R46P59540 309 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 HSPE1P61604 102 aaKnown RBP4.01□□□□□ -1.77
DNMT1-220ENST00000589351 OPCMLQ14982 345 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 RBMY1FQ15415 496 aaKnown RBP4.01□□□□□ -1.77
DNMT1-220ENST00000589351 LRRC37A5PQ49AS3 106 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 UBE2UQ5VVX9 321 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 STEAP1BQ6NZ63 245 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 SFXN4Q6P4A7 337 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 TOMM20LQ6UXN7 152 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 Q6ZTC4 211 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 TRPT1Q86TN4 253 aaKnown RBP4.01□□□□□ -1.77
DNMT1-220ENST00000589351 TMEM230Q96A57 120 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 S100A16Q96FQ6 103 aaKnown RBP4.01□□□□□ -1.77
DNMT1-220ENST00000589351 ZNF414Q96IQ9 312 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 FAM210BQ96KR6 192 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 PDCD10Q9BUL8 212 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 AAMDCQ9H7C9 122 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 TXNL4BQ9NX01 149 aaKnown RBP4.01□□□□□ -1.77
DNMT1-220ENST00000589351 V9GYY9 64 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 KMT2AQ03164 3969 aa4.01□□□□□ -1.77
DNMT1-220ENST00000589351 HERC2O95714 4834 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 TRAV30A0A087WSZ9 112 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 IGHV3-66A0A0C4DH42 116 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 TEX48A0A1B0GUV7 120 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 A0A1B0GVY2 172 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 TMEM189A5PLL7 270 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 SPART-AS1P0CW21 52 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 PTHLHP12272 177 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 PSMB9P28065 219 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 HOXA1P49639 335 aaPredicted RBP4□□□□□ -1.77
DNMT1-220ENST00000589351 NKX2-5P52952 324 aaPredicted RBP4□□□□□ -1.77
DNMT1-220ENST00000589351 AQP4P55087 323 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 SNRPD3P62318 126 aaKnown RBP4□□□□□ -1.77
DNMT1-220ENST00000589351 PRCDQ00LT1 54 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 CTF1Q16619 201 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 RNF212Q495C1 297 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 COX19Q49B96 90 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 ACTL10Q5JWF8 245 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 IDNKQ5T6J7 187 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 Q6ZRG5 221 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 LINC00518Q8N0U6 118 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 ZNF114Q8NC26 417 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 OR5H2Q8NGV7 314 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 ATP5SQ99766 215 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 NIPSNAP3BQ9BS92 247 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 ZNF2Q9BSG1 426 aaPredicted RBP4□□□□□ -1.77
DNMT1-220ENST00000589351 ACTR3CQ9C0K3 210 aaPredicted RBP4□□□□□ -1.77
DNMT1-220ENST00000589351 RNF167Q9H6Y7 350 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 ENY2Q9NPA8 101 aa4□□□□□ -1.77
DNMT1-220ENST00000589351 DNAH10Q8IVF4 4471 aa3.99□□□□□ -1.77
DNMT1-220ENST00000589351 MEIS3P1A6NDR6 274 aa3.99□□□□□ -1.77
DNMT1-220ENST00000589351 SMIM9A6NGZ8 99 aa3.99□□□□□ -1.77
DNMT1-220ENST00000589351 K7EQG2 157 aa3.99□□□□□ -1.77
DNMT1-220ENST00000589351 HSBP1O75506 76 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms