RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 KIAA2026Q5HYC2 2103 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 GREB1Q4ZG55 1949 aa4.46□□□□□ -1.7
LINC01538-201ENST00000588074 PLXNB3Q9ULL4 1909 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 FAM240AA0A1B0GVK7 77 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 H3BTX0 84 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 PLPP1O14494 284 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 ZFAND5O76080 213 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 IGKV1D-33P01593 117 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 IGKV1-33P01594 117 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 P04436 131 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 CD7P09564 240 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 FBXW4P57775 412 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 SP6Q3SY56 376 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 LINC00173Q6ZV60 143 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 AMN1Q8IY45 258 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 TMEM158Q8WZ71 300 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 KRTAP4-8Q9BYQ9 185 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 RETNQ9HD89 108 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 C11orf21Q9P2W6 132 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 ANAPC1Q9H1A4 1944 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 TRAV8-4A0A0B4J246 113 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 A0A1B0GTH9 108 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 C15orf62A8K5M9 175 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 LMX1BO60663 402 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 FKBP1CQ5VVH2 108 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 Q6ZSR3 168 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 MED12LQ86YW9 2145 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 POM121L12Q8N7R1 296 aa4.45□□□□□ -1.7
LINC01538-201ENST00000588074 GPX7Q96SL4 187 aaPredicted RBP4.45□□□□□ -1.7
LINC01538-201ENST00000588074 KLK5Q9Y337 293 aaPredicted RBP4.45□□□□□ -1.7
LINC01538-201ENST00000588074 PLXNA2O75051 1894 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 BPTFQ12830 3046 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 A0A0A6YYD4 124 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 TRAV13-1A0A0B4J241 112 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 TRBV5-4A0A0C4DH59 114 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 C17orf51A8MQB3 221 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 PRRG2O14669 202 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 IGLV3-25P01717 112 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 IL4P05112 153 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 FHL1Q13642 323 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 ARTNQ5T4W7 220 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 ZNF493Q6ZR52 646 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 AAED1Q7RTV5 226 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 C1orf158Q8N1D5 194 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 ZNF747Q9BV97 191 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 TRAV8-1A0A0A6YYK1 113 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 CDX4O14627 284 aaPredicted RBP4.44□□□□□ -1.7
LINC01538-201ENST00000588074 OXTP01178 125 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 GCHFRP30047 84 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 RPL13AP40429 203 aaKnown RBP4.44□□□□□ -1.7
LINC01538-201ENST00000588074 RPS18P62269 152 aaKnown RBP4.44□□□□□ -1.7
LINC01538-201ENST00000588074 ZC2HC1BQ5TFG8 222 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 LIME1Q9H400 295 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 MGAMO43451 1857 aa4.44□□□□□ -1.7
LINC01538-201ENST00000588074 NDUFC2-KCTD14E9PQ53 114 aa4.43□□□□□ -1.7
LINC01538-201ENST00000588074 IZUMO4Q1ZYL8 232 aa4.43□□□□□ -1.7
LINC01538-201ENST00000588074 Q6YL49 198 aa4.43□□□□□ -1.7
LINC01538-201ENST00000588074 ARHGAP5-AS1Q96IT6 56 aa4.43□□□□□ -1.7
LINC01538-201ENST00000588074 BMFQ96LC9 184 aa4.43□□□□□ -1.7
LINC01538-201ENST00000588074 SLC25A2Q9BXI2 301 aa4.43□□□□□ -1.7
LINC01538-201ENST00000588074 MRPL20Q9BYC9 149 aaKnown RBP4.43□□□□□ -1.7
LINC01538-201ENST00000588074 AGPAT4-IT1Q9H0P7 198 aa4.43□□□□□ -1.7
LINC01538-201ENST00000588074 C16orf97H3BN30 126 aa4.43□□□□□ -1.7
LINC01538-201ENST00000588074 K7EM74 188 aa4.43□□□□□ -1.7
LINC01538-201ENST00000588074 UBE2D3P61077 147 aa4.43□□□□□ -1.7
LINC01538-201ENST00000588074 UBE2D2P62837 147 aa4.43□□□□□ -1.7
LINC01538-201ENST00000588074 RSPO1Q2MKA7 263 aaPredicted RBP4.43□□□□□ -1.7
LINC01538-201ENST00000588074 OR52N5Q8NH56 324 aa4.43□□□□□ -1.7
LINC01538-201ENST00000588074 LINC00476Q8WZB0 136 aa4.43□□□□□ -1.7
LINC01538-201ENST00000588074 SMCHD1A6NHR9 2005 aa4.43□□□□□ -1.7
LINC01538-201ENST00000588074 GTF3C1Q12789 2109 aa4.43□□□□□ -1.7
LINC01538-201ENST00000588074 SCO2A0A1W2PP80 73 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 C15orf61A6NNL5 157 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 EPM2AB3EWF7 344 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 C1orf105O95561 183 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 IGKCP01834 107 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 BGLAPP02818 100 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 P0DMU3 169 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 FAM231AP0DMU4 169 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 FAM231CP0DMU5 169 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 WT1P19544 449 aaPredicted RBP4.42□□□□□ -1.7
LINC01538-201ENST00000588074 CST6Q15828 149 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 DGAT2L6Q6ZPD8 337 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 OR5AS1Q8N127 324 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 ZNF441Q8N8Z8 693 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 FAM19A4Q96LR4 140 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 SHANK2-AS3Q9BTD1 123 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 EPDR1Q9UM22 224 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 F11RQ9Y624 299 aaKnown RBP4.42□□□□□ -1.7
LINC01538-201ENST00000588074 KIAA1549Q9HCM3 1950 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 PCSK5Q92824 1860 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 MYMXA0A1B0GTQ4 84 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 LINC01553A4QN01 128 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 H7C1H1 209 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 ZNHIT1O43257 154 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 SPINK4O60575 86 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 SRSF10O75494 262 aaKnown RBP4.42□□□□□ -1.7
LINC01538-201ENST00000588074 CLDN14O95500 239 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 NPYP01303 97 aa4.42□□□□□ -1.7
LINC01538-201ENST00000588074 HMGN2P05204 90 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms