RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 MED12LQ86YW9 2145 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 NBASA2RRP1 2371 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 MGAQ8IWI9 3026 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 IFITM10A6NMD0 228 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 E7EQL1 145 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 TRAPPC2LH3BP13 241 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 PFDN1O60925 122 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 ADRA2AP08913 450 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 UBBP0CG47 229 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 INAFM2P0DMQ5 153 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 BLVRBP30043 206 aaPredicted RBP3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 FXYD6P3P58550 94 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 LINC01590Q5TEZ4 76 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 EBLN2Q6P2I7 272 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 OR8D4Q8NGM9 314 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 OR51H1Q8NH63 302 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 PAXXQ9BUH6 204 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 CST11Q9H112 138 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 SDF2L1Q9HCN8 221 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 HSPB8Q9UJY1 196 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 ZNF462Q96JM2 2506 aa3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 SPTBN1Q01082 2364 aaKnown RBP3.72□□□□□ -1.81
VPS35P1-201ENST00000563400 NCOA6Q14686 2063 aaPredicted RBP3.71□□□□□ -1.81
VPS35P1-201ENST00000563400 SPEGQ15772 3267 aa3.71□□□□□ -1.81
VPS35P1-201ENST00000563400 B4DSR2 109 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 NDUFB3O43676 98 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 NDUFC2O95298 119 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 SEC11BP0C7V7 166 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 ATP5G3P48201 142 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 FABP9Q0Z7S8 132 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 PSG7Q13046 419 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 RNF212Q495C1 297 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 TMEM155Q4W5P6 130 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 FA2HQ7L5A8 372 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 SAXO1Q8IYX7 474 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 OR5P3Q8WZ94 311 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 IGF2BP2-AS1Q96M15 143 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 ADAT1Q9BUB4 502 aaKnown RBP3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 FGF23Q9GZV9 251 aaPredicted RBP3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 CHST6Q9GZX3 395 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 PARP12Q9H0J9 701 aaKnown RBP3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 RBM7Q9Y580 266 aaKnown RBP3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 MAST4O15021 2626 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 PCNX3Q9H6A9 2034 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 PCNX1Q96RV3 2341 aa3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 HEATR1Q9H583 2144 aaKnown RBP3.71□□□□□ -1.82
VPS35P1-201ENST00000563400 PIGBOS1A0A0B4J2F0 54 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 SMIM31A0A1B0GVY4 71 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 C19orf84I3L1E1 186 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 J3KT08 172 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 APOA2P02652 100 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 CFC1BP0CG36 223 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 SMIM17P0DL12 118 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 THBS3P49746 956 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 AQP4P55087 323 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 TMEM183BQ1AE95 376 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 C6orf52Q5T4I8 152 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 OR2T2Q6IF00 324 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 PDPNQ86YL7 162 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 TMEM183AQ8IXX5 376 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 OR8B3Q8NGG8 313 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 TMEM101Q96IK0 257 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 OR8B2Q96RD0 313 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 MGLLQ99685 303 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 LITAFQ99732 161 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 SOSTQ9BQB4 213 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 CHAC1Q9BUX1 264 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 DUSP21Q9H596 190 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 GPR84Q9NQS5 396 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 MMP26Q9NRE1 261 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 OR5V1Q9UGF6 321 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 GCN1Q92616 2671 aaKnown RBP3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 FRYQ5TBA9 3013 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 FLNBO75369 2602 aaKnown RBP3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 IGSF10Q6WRI0 2623 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 MPDZO75970 2070 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 HIVEP3Q5T1R4 2406 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 MYO18BQ8IUG5 2567 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 IGKV1D-43A0A0B4J1Z2 117 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 OR7C2O60412 319 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 DEDDO75618 318 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 SERF1AO75920 110 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 APOMO95445 188 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 IGKV1-39P01597 117 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 IGKV1D-39P04432 117 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 CRHBPP24387 322 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 ZNF93P35789 620 aaPredicted RBP3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 INPP1P49441 399 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 GNB2P62879 340 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 CCL8P80075 99 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 LOXL1Q08397 574 aaPredicted RBP3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 HSD17B12Q53GQ0 312 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 MPV17L2Q567V2 206 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 BAP18Q8IXM2 172 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 Q8N377 158 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 C12orf45Q8N5I9 185 aaPredicted RBP3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 C20orf203Q8NBC4 194 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 TMEM106AQ96A25 262 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 PLEKHB2Q96CS7 222 aa3.7□□□□□ -1.82
VPS35P1-201ENST00000563400 DERL3Q96Q80 235 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms