RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 RBAKDNA6NC62 111 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 H3BUT2 72 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 SOCS2O14508 198 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 IGHV4-59P01825 116 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 IGKCP01834 107 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 GLI2P10070 1586 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 MPV17P39210 176 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 RPL23P62829 140 aaKnown RBP3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 CCL8P80075 99 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 SP6Q3SY56 376 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 ETDBQ3ZM63 59 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 NMSQ5H8A3 153 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 C1orf100Q5SVJ3 147 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 TMEM136Q6ZRR5 245 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 SCXQ7RTU7 201 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 HMGN2P46Q86SG4 172 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 C17orf82Q86X59 251 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 OR5AS1Q8N127 324 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 C6orf223Q8N319 242 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 SLC25A29Q8N8R3 303 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 PRSS3P2Q8NHM4 247 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 GTSF1Q8WW33 167 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 LINC01600Q96MT4 127 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 TIMM17AQ99595 171 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 RHNO1Q9BSD3 238 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 RNF126Q9BV68 326 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 GABARAPL3Q9BY60 117 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 DPH3P1Q9H4G8 78 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 DEPPQ9NTK1 212 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 IFT172Q9UG01 1749 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 SLC25A15Q9Y619 301 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 GREB1LQ9C091 1923 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 POLEQ07864 2286 aa3.4□□□□□ -1.87
HMGB3P26-201ENST00000560051 ATP7AQ04656 1500 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 VWDEQ8N2E2 1590 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 FXYD6-FXYD2A0A087WZ82 144 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 TRAV19A0A0A6YYK7 116 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 TRBV5-4A0A0C4DH59 114 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 A0A0G2JRQ6 117 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 TMEM256-PLSCR3K7ERE1 68 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 NDUFC1O43677 76 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 HLA-DPB1P04440 258 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 CXCL1P09341 107 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 CD7P09564 240 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 FRMD6-AS1P0C7T7 363 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 PTHLHP12272 177 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 FAUP35544 74 aaKnown RBP3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 DYNLT3P51808 116 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 LINC00313P59037 77 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 SNRPFP62306 86 aaKnown RBP3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 SNRPD3P62318 126 aaKnown RBP3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 ZNF101Q8IZC7 436 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 ZNRF1Q8ND25 227 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 WFDC11Q8NEX6 87 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 OR8B3Q8NGG8 313 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 C11orf52Q96A22 123 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 FXYD6Q9H0Q3 95 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 ZNF702PQ9H963 129 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 MYO3AQ8NEV4 1616 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 PIK3C2AO00443 1686 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 PDCD11Q14690 1871 aaKnown RBP3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 NLRC5Q86WI3 1866 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 TANC1Q9C0D5 1861 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 PLXNA4Q9HCM2 1894 aa3.39□□□□□ -1.87
HMGB3P26-201ENST00000560051 ADGRB1O14514 1584 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 IGHV7-81A0A0B4J1V7 117 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 IGHV3-20A0A0C4DH32 117 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 EPOPA6NHQ4 379 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 ZNF736B4DX44 427 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 OR1I1O60431 355 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 PROP1O75360 226 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 IGHV4-39P01824 125 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 LINC00271P0C7V0 271 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 IGLL1P15814 213 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 VDAC1P21796 283 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 SSR2P43308 183 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 CSRP3P50461 194 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 ZNF80P51504 273 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 ZNF136P52737 540 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 SMIM11AP58511 58 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 HERVK_113P61574 105 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 CYCSP99999 105 aaKnown RBP3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 TWIST1Q15672 202 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 ASB16-AS1Q495Z4 193 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 ORMDL2Q53FV1 153 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 FAM72AQ5TYM5 149 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 MIC13Q5XKP0 118 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 EBLN2Q6P2I7 272 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 C5orf38Q86SI9 138 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 DCANP1Q8TF63 244 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 FGF13Q92913 245 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 URB1-AS1Q96HZ7 61 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 TRGV9Q99603 122 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 OPRPNQ99935 248 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 TMEM204Q9BSN7 226 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 SDF2L1Q9HCN8 221 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 LSM2Q9Y333 95 aaKnown RBP3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 ANKRD31Q8N7Z5 1873 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 TICRRQ7Z2Z1 1910 aa3.38□□□□□ -1.87
HMGB3P26-201ENST00000560051 C10orf71Q711Q0 1435 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms