RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 F2RP25116 425 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 PSMB9P28065 219 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 FCGR2CP31995 323 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 G6PCP35575 357 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 RPL5P46777 297 aaKnown RBP2.73□□□□□ -1.97
SNHG1-220ENST00000544550 MEOX2P50222 304 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 KRTAP10-4P60372 401 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-220ENST00000544550 YPEL3P61236 119 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-220ENST00000544550 RPS25P62851 125 aaKnown RBP2.73□□□□□ -1.97
SNHG1-220ENST00000544550 FCN2Q15485 313 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 HACD4Q5VWC8 232 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 TMEM144Q7Z5S9 345 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 LINC00612Q8N6U2 182 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 LRTM2Q8N967 370 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 SLC24A4Q8NFF2 622 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 OR1S2Q8NGQ3 325 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 OR6F1Q8NGZ6 308 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 TMEM263Q8WUH6 116 aaKnown RBP2.73□□□□□ -1.97
SNHG1-220ENST00000544550 SGK494Q96LW2 274 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 LINC01587Q99440 93 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 LINC00467Q9BRT7 94 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 SLC5A7Q9GZV3 580 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 NOP10Q9NPE3 64 aaKnown RBP2.73□□□□□ -1.97
SNHG1-220ENST00000544550 KLK11Q9UBX7 282 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 AK6Q9Y3D8 172 aaKnown RBP2.73□□□□□ -1.97
SNHG1-220ENST00000544550 IGKV2D-30A0A075B6S6 120 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 IGLV5-45A0A087WSX0 123 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 LRCOL1A6NCL2 159 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 WBP4O75554 376 aaKnown RBP2.72□□□□□ -1.97
SNHG1-220ENST00000544550 GAS8-AS1O95177 125 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 IGKV1-17P01599 117 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 IGLV2-8P01709 118 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 SLC25A4P12235 298 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 HTN1P15515 57 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 AZU1P20160 251 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 PSMA1P25786 263 aaKnown RBP2.72□□□□□ -1.97
SNHG1-220ENST00000544550 S100GP29377 79 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 LPAR6P43657 344 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 CBX5P45973 191 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 CLDN12P56749 244 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 OR10A3P58181 314 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 FXYD4P59646 89 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 GNG2P59768 71 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 HSPE1P61604 102 aaKnown RBP2.72□□□□□ -1.97
SNHG1-220ENST00000544550 INSL4Q14641 139 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 TRAM1Q15629 374 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 SPINK13Q1W4C9 94 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 IZUMO4Q1ZYL8 232 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 TIGITQ495A1 244 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 CDNFQ49AH0 187 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 C1orf194Q5T5A4 169 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 IDNKQ5T6J7 187 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 HES5Q5TA89 166 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 OR8G2PQ6IF36 304 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 AMTNQ6UX39 209 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 ZNF818PQ6ZRF7 136 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 Q6ZRU5 148 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 SCXQ7RTU7 201 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 H2BFWTQ7Z2G1 175 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 TMED4Q7Z7H5 227 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 SLC35G3Q8N808 338 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 ZNF555Q8NEP9 628 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 RNASE8Q8TDE3 154 aaKnown RBP2.72□□□□□ -1.97
SNHG1-220ENST00000544550 FCAMRQ8WWV6 532 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 PDCD10Q9BUL8 212 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 C9orf16Q9BUW7 83 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 FAM212BQ9NTI7 297 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-220ENST00000544550 ICOSQ9Y6W8 199 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 V9GY05 133 aa2.72□□□□□ -1.97
SNHG1-220ENST00000544550 LRP1Q07954 4544 aaKnown RBP2.72□□□□□ -1.97
SNHG1-220ENST00000544550 SNURFLB1AK76 121 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 F6UB75 175 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 BOLA2-SMG1P6H3BVE0 249 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 H7BYZ3 331 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 M0R2Z0 102 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 SOCS3O14543 225 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 PDCD5O14737 125 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 CASQ2O14958 399 aaPredicted RBP2.71□□□□□ -1.98
SNHG1-220ENST00000544550 CRXO43186 299 aaPredicted RBP2.71□□□□□ -1.98
SNHG1-220ENST00000544550 PRM2P04554 102 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 RLN1P04808 185 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 CRYGDP07320 174 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 IGLC1P0CG04 106 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 RD3LP0DJH9 198 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 MT1HL1P0DM35 61 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 UCP1P25874 307 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 OR10J1P30954 320 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 CNN1P51911 297 aaKnown RBP2.71□□□□□ -1.98
SNHG1-220ENST00000544550 DEFB1P60022 68 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 RPL37AP61513 92 aaKnown RBP2.71□□□□□ -1.98
SNHG1-220ENST00000544550 HERV-K104P61576 105 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 SUPT4H1P63272 117 aaKnown RBP2.71□□□□□ -1.98
SNHG1-220ENST00000544550 DHODHQ02127 395 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 SLAQ13239 276 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 GAMTQ14353 236 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 C1orf146Q5VVC0 180 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 ETFRF1Q6IPR1 90 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 TMEM17Q86X19 198 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 BAP18Q8IXM2 172 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 BEST4Q8NFU0 473 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms