RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 LCN12Q6JVE5 192 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 MRPL54Q6P161 138 aaKnown RBP2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 C12orf54Q6X4T0 127 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 C16orf47Q6ZP98 133 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 TMEM136Q6ZRR5 245 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 S100A7AQ86SG5 101 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 RPS19BP1Q86WX3 136 aaKnown RBP2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 DEFB119Q8N690 84 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 KIR3DL3Q8N743 410 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 NECAP1Q8NC96 275 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR10G3Q8NGC4 313 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR2Y1Q8NGV0 311 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR4A5Q8NH83 315 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR1F12Q8NHA8 337 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 TSKUQ8WUA8 353 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 NAT6Q93015 286 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 SFRP2Q96HF1 295 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 TMEM101Q96IK0 257 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 LINC00167Q96N53 147 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR5B12Q96R08 314 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 TPPP3Q9BW30 176 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 ULBP2Q9BZM5 246 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 LINC00470Q9BZP3 86 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 TMEM133Q9H2Q1 129 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 BANF2Q9H503 90 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 TUBG2Q9NRH3 451 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 NECAP2Q9NVZ3 263 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 PLEKHJ1Q9NW61 149 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 PEF1Q9UBV8 284 aaKnown RBP2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 TP73-AS1Q9UF72 201 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 JPT1Q9UK76 154 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 PIGLQ9Y2B2 252 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 LINC00312Q9Y6C7 94 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 V9GYV3 84 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 CABIN1Q9Y6J0 2220 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 KNTC1P50748 2209 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 KIAA0100Q14667 2235 aaKnown RBP2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 BRCA2P51587 3418 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 CHD7Q9P2D1 2997 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 IGKV1-27A0A075B6S5 117 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 A0A0G2JMM0 328 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 A0A0G2JRQ6 117 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 A0A0J9YXY3 114 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 SPAARA0A1B0GVQ0 90 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 A0A1W2PPB8 328 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 C5orf63A6NC05 138 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 KIR3DP1A8MWS1 328 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 C9JCJ5 164 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 F5H5K5 113 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 H3BRM9 83 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 PANO1I0J062 215 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 K7EN84 100 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 M0R135 149 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 RS1O15537 224 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 CHST1O43916 411 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 GNG7O60262 68 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 PDCD6O75340 191 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR2J3O76001 311 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 CST7O76096 145 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 IFNA1P01562 189 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 MT-ND6P03923 174 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 SERPINA7P05543 415 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 COX6A1P12074 109 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 CCL2P13500 99 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 NPY1RP25929 384 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 SSTR5P35346 364 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 CA7P43166 264 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 SSR4P51571 173 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 KRTDAPP60985 99 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 SEC11AP67812 179 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 HIST1H1AQ02539 215 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 SRSF6Q13247 344 aaKnown RBP2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 RAB31Q13636 194 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 GNMTQ14749 295 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 CLEC12BQ2HXU8 276 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 CEACAM21Q3KPI0 293 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 KCNIP4Q6PIL6 250 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 LCN15Q6UWW0 184 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 TMEM14EPQ6UXP3 125 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 MOB3BQ86TA1 216 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 LINC00596Q86U02 117 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 MKXQ8IYA7 352 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 BOD1L2Q8IYS8 172 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 GAPTQ8N292 157 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 OSR2Q8N2R0 312 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 SIGLECL1Q8N7X8 197 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 ZNF439Q8NDP4 499 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR10P1Q8NGE3 313 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR5A2Q8NGI9 324 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR5A1Q8NGJ0 315 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR10G9Q8NGN4 311 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 CACNG8Q8WXS5 425 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 RAB1CQ92928 201 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 LSM10Q969L4 123 aaKnown RBP2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 MRAP2Q96G30 205 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 C18orf15Q96N68 181 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 SPACA5Q96QH8 159 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR4C12Q96R67 309 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 GPER1Q99527 375 aa2.18□□□□□ -2.06
HMGB1P41-201ENST00000520234 SPIN2AQ99865 258 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms