RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 SLC25A46Q96AG3 418 aa4.01□□□□□ -1.77
SPTA1-209ENST00000498708 PINX1Q96BK5 328 aaKnown RBP4.01□□□□□ -1.77
SPTA1-209ENST00000498708 DAZAP1Q96EP5 407 aaKnown RBP4.01□□□□□ -1.77
SPTA1-209ENST00000498708 FUNDC2Q9BWH2 189 aa4.01□□□□□ -1.77
SPTA1-209ENST00000498708 QTRT1Q9BXR0 403 aaKnown RBP4.01□□□□□ -1.77
SPTA1-209ENST00000498708 SRRQ9GZT4 340 aa4.01□□□□□ -1.77
SPTA1-209ENST00000498708 ARV1Q9H2C2 271 aa4.01□□□□□ -1.77
SPTA1-209ENST00000498708 RNF167Q9H6Y7 350 aa4.01□□□□□ -1.77
SPTA1-209ENST00000498708 GPN1Q9HCN4 374 aaPredicted RBP4.01□□□□□ -1.77
SPTA1-209ENST00000498708 TXNL4BQ9NX01 149 aaKnown RBP4.01□□□□□ -1.77
SPTA1-209ENST00000498708 NDUFB11Q9NX14 153 aa4.01□□□□□ -1.77
SPTA1-209ENST00000498708 FAM30AQ9NZY2 134 aa4.01□□□□□ -1.77
SPTA1-209ENST00000498708 KLK9Q9UKQ9 250 aa4.01□□□□□ -1.77
SPTA1-209ENST00000498708 OR51B2Q9Y5P1 312 aa4.01□□□□□ -1.77
SPTA1-209ENST00000498708 F11RQ9Y624 299 aaKnown RBP4.01□□□□□ -1.77
SPTA1-209ENST00000498708 TRAV14DV4A0A0A6YYC5 116 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 A0A1B0GW15 77 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 K7EIM0 57 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 M0R143 59 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 GOSR2O14653 212 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 CYB5BO43169 146 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 ST8SIA3O43173 380 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 IFNA5P01569 189 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 PMP2P02689 132 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 APOHP02749 345 aaPredicted RBP4□□□□□ -1.77
SPTA1-209ENST00000498708 EIF4EP06730 217 aaKnown RBP4□□□□□ -1.77
SPTA1-209ENST00000498708 CTSGP08311 255 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 PVALBP20472 110 aaPredicted RBP4□□□□□ -1.77
SPTA1-209ENST00000498708 HERV-K104P61576 105 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 SELENOTP62341 195 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 DLK1P80370 383 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 RPL19P84098 196 aaKnown RBP4□□□□□ -1.77
SPTA1-209ENST00000498708 IFITM3Q01628 133 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 DHODHQ02127 395 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 TMEM187Q14656 261 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 LGALS9BQ3B8N2 356 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 TMEM41BQ5BJD5 291 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 SPINK9Q5DT21 86 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 IDNKQ5T6J7 187 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 SFXN4Q6P4A7 337 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 HOGA1Q86XE5 327 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 FAM24BQ8N5W8 94 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 TMEM116Q8NCL8 245 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 OR1L8Q8NGR8 309 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 TERB2Q8NHR7 220 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 RNASE8Q8TDE3 154 aaKnown RBP4□□□□□ -1.77
SPTA1-209ENST00000498708 ASB13Q8WXK3 278 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 LSM10Q969L4 123 aaKnown RBP4□□□□□ -1.77
SPTA1-209ENST00000498708 ZNF414Q96IQ9 312 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 HRH4Q9H3N8 390 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 EHFQ9NZC4 300 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 RABAC1Q9UI14 185 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 URGCP-MRPS24S4R325 110 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 PKHD1L1Q86WI1 4243 aa4□□□□□ -1.77
SPTA1-209ENST00000498708 IGLV2-18A0A075B6J9 118 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 IGHV4-28A0A0C4DH34 117 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 FBLL1A6NHQ2 334 aaKnown RBP3.99□□□□□ -1.77
SPTA1-209ENST00000498708 KNCNA6PVL3 124 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 C15orf62A8K5M9 175 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 C1orf196B1AJZ1 125 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 K7EMT4 169 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 RBFOX2O43251 390 aaKnown RBP eCLIP3.99□□□□□ -1.77
SPTA1-209ENST00000498708 PGLYRP1O75594 196 aaPredicted RBP3.99□□□□□ -1.77
SPTA1-209ENST00000498708 MT-CO2P00403 227 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 NPSP0C0P6 89 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 HLA-DMBP28068 263 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 SDC2P34741 201 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 RFX2P48378 723 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 RORCP51449 518 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 MFAP4P55083 255 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 PAFAH1B2P68402 229 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 MRPS10P82664 201 aaKnown RBP3.99□□□□□ -1.77
SPTA1-209ENST00000498708 FCN2Q15485 313 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 POU2AF1Q16633 256 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 PHLDA2Q53GA4 152 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 SPSB3Q6PJ21 355 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 Q6ZR54 194 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 Q6ZTC4 211 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 SSX7Q7RTT5 188 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 TMEM144Q7Z5S9 345 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 OR5AP2Q8NGF4 316 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 FCAMRQ8WWV6 532 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 SLC25A38Q96DW6 304 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 LINC00052Q96N35 136 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 NKX6-2Q9C056 277 aaPredicted RBP3.99□□□□□ -1.77
SPTA1-209ENST00000498708 PLEKHA2Q9HB19 425 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 NDUFA4L2Q9NRX3 87 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 SPANXA1Q9NS26 97 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 ETV7Q9Y603 341 aa3.99□□□□□ -1.77
SPTA1-209ENST00000498708 IGHV4-4A0A075B6R2 117 aa3.98□□□□□ -1.77
SPTA1-209ENST00000498708 TRBV7-9A0A0J9YWB2 115 aa3.98□□□□□ -1.77
SPTA1-209ENST00000498708 K7ERU9 68 aa3.98□□□□□ -1.77
SPTA1-209ENST00000498708 GNG7O60262 68 aa3.98□□□□□ -1.77
SPTA1-209ENST00000498708 SCGNO76038 276 aa3.98□□□□□ -1.77
SPTA1-209ENST00000498708 TCRBP04435 133 aa3.98□□□□□ -1.77
SPTA1-209ENST00000498708 OR10J4P0C629 311 aa3.98□□□□□ -1.77
SPTA1-209ENST00000498708 SPP1P10451 314 aa3.98□□□□□ -1.77
SPTA1-209ENST00000498708 ANXA3P12429 323 aa3.98□□□□□ -1.77
SPTA1-209ENST00000498708 ZNF182P17025 639 aaPredicted RBP3.98□□□□□ -1.77
SPTA1-209ENST00000498708 MALP21145 153 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms