RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 G3V3Q6 166 aa11.76□□□□□ -0.53
C9orf3-219ENST00000488186 TAAR5O14804 337 aa11.76□□□□□ -0.53
C9orf3-219ENST00000488186 IGHV4-30-4P0DP06 118 aa11.76□□□□□ -0.53
C9orf3-219ENST00000488186 RPL7P18124 248 aaKnown RBP11.76□□□□□ -0.53
C9orf3-219ENST00000488186 FFAR4Q5NUL3 377 aa11.76□□□□□ -0.53
C9orf3-219ENST00000488186 TMEM37Q8WXS4 190 aa11.76□□□□□ -0.53
C9orf3-219ENST00000488186 ST6GAL2Q96JF0 529 aa11.76□□□□□ -0.53
C9orf3-219ENST00000488186 RSG1Q9BU20 258 aa11.76□□□□□ -0.53
C9orf3-219ENST00000488186 HMSDA8MTL9 139 aa11.75□□□□□ -0.53
C9orf3-219ENST00000488186 ID1P41134 155 aa11.75□□□□□ -0.53
C9orf3-219ENST00000488186 SNRPD3P62318 126 aaKnown RBP11.75□□□□□ -0.53
C9orf3-219ENST00000488186 BPIFA4PQ86YQ2 179 aa11.75□□□□□ -0.53
C9orf3-219ENST00000488186 HSD17B11Q8NBQ5 300 aa11.75□□□□□ -0.53
C9orf3-219ENST00000488186 LRRC20Q8TCA0 184 aa11.75□□□□□ -0.53
C9orf3-219ENST00000488186 SRD5A3Q9H8P0 318 aa11.75□□□□□ -0.53
C9orf3-219ENST00000488186 A0A0D9SG52 128 aa11.74□□□□□ -0.53
C9orf3-219ENST00000488186 K7EQG2 157 aa11.74□□□□□ -0.53
C9orf3-219ENST00000488186 MEOX2P50222 304 aa11.74□□□□□ -0.53
C9orf3-219ENST00000488186 FAM78BQ5VT40 261 aa11.74□□□□□ -0.53
C9orf3-219ENST00000488186 SAMD13Q5VXD3 122 aa11.74□□□□□ -0.53
C9orf3-219ENST00000488186 TCTE3Q8IZS6 198 aa11.74□□□□□ -0.53
C9orf3-219ENST00000488186 C16orf92Q96LL3 132 aa11.74□□□□□ -0.53
C9orf3-219ENST00000488186 JTBO76095 146 aa11.73□□□□□ -0.53
C9orf3-219ENST00000488186 ZNF688P0C7X2 276 aa11.73□□□□□ -0.53
C9orf3-219ENST00000488186 DEFB131AP59861 70 aa11.73□□□□□ -0.53
C9orf3-219ENST00000488186 ACOT6Q3I5F7 207 aaPredicted RBP11.73□□□□□ -0.53
C9orf3-219ENST00000488186 RPL7L1Q6DKI1 246 aaKnown RBP11.73□□□□□ -0.53
C9orf3-219ENST00000488186 OR11H4Q8NGC9 324 aa11.73□□□□□ -0.53
C9orf3-219ENST00000488186 DCANP1Q8TF63 244 aa11.73□□□□□ -0.53
C9orf3-219ENST00000488186 LINC00052Q96N35 136 aa11.73□□□□□ -0.53
C9orf3-219ENST00000488186 FAM110AQ9BQ89 295 aa11.73□□□□□ -0.53
C9orf3-219ENST00000488186 WFDC10AQ9H1F0 79 aa11.73□□□□□ -0.53
C9orf3-219ENST00000488186 TIMM9Q9Y5J7 89 aa11.73□□□□□ -0.53
C9orf3-219ENST00000488186 A0A1B0GVG6 124 aa11.72□□□□□ -0.53
C9orf3-219ENST00000488186 KANTRA0A1W2PQU2 76 aa11.72□□□□□ -0.53
C9orf3-219ENST00000488186 PFDN1O60925 122 aa11.72□□□□□ -0.53
C9orf3-219ENST00000488186 FRMD6-AS1P0C7T7 363 aa11.72□□□□□ -0.53
C9orf3-219ENST00000488186 ZNF345Q14585 488 aa11.72□□□□□ -0.53
C9orf3-219ENST00000488186 ODF3L2Q3SX64 289 aa11.72□□□□□ -0.53
C9orf3-219ENST00000488186 GCSAMLQ5JQS6 135 aa11.72□□□□□ -0.53
C9orf3-219ENST00000488186 PSMG4Q5JS54 123 aa11.72□□□□□ -0.53
C9orf3-219ENST00000488186 APRG1Q8IVJ8 170 aa11.72□□□□□ -0.53
C9orf3-219ENST00000488186 KCNRGQ8N5I3 272 aa11.72□□□□□ -0.53
C9orf3-219ENST00000488186 GNPNAT1Q96EK6 184 aaPredicted RBP11.72□□□□□ -0.53
C9orf3-219ENST00000488186 ARPC5LQ9BPX5 153 aa11.72□□□□□ -0.53
C9orf3-219ENST00000488186 MAP6D1Q9H9H5 199 aa11.72□□□□□ -0.53
C9orf3-219ENST00000488186 TRAV5A0A0B4J249 113 aa11.71□□□□□ -0.53
C9orf3-219ENST00000488186 A0A1W2PPV4 95 aa11.71□□□□□ -0.53
C9orf3-219ENST00000488186 A8MZ25 164 aa11.71□□□□□ -0.53
C9orf3-219ENST00000488186 ATP6V0CP27449 155 aa11.71□□□□□ -0.53
C9orf3-219ENST00000488186 RHOBP62745 196 aa11.71□□□□□ -0.53
C9orf3-219ENST00000488186 FAM24BQ8N5W8 94 aa11.71□□□□□ -0.53
C9orf3-219ENST00000488186 MRPL32Q9BYC8 188 aaKnown RBP11.71□□□□□ -0.53
C9orf3-219ENST00000488186 SEPSECSQ9HD40 501 aaKnown RBP11.71□□□□□ -0.53
C9orf3-219ENST00000488186 C19orf73Q9NVV2 129 aa11.71□□□□□ -0.53
C9orf3-219ENST00000488186 ISLRO14498 428 aa11.7□□□□□ -0.54
C9orf3-219ENST00000488186 MBP02144 154 aa11.7□□□□□ -0.54
C9orf3-219ENST00000488186 C1QBP02746 253 aa11.7□□□□□ -0.54
C9orf3-219ENST00000488186 M6PRP20645 277 aa11.7□□□□□ -0.54
C9orf3-219ENST00000488186 PSMB3P49720 205 aa11.7□□□□□ -0.54
C9orf3-219ENST00000488186 MORN5Q5VZ52 161 aa11.7□□□□□ -0.54
C9orf3-219ENST00000488186 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.7□□□□□ -0.54
C9orf3-219ENST00000488186 HYLS1Q96M11 299 aa11.7□□□□□ -0.54
C9orf3-219ENST00000488186 B9D2Q9BPU9 175 aa11.7□□□□□ -0.54
C9orf3-219ENST00000488186 PSMG3Q9BT73 122 aaPredicted RBP11.7□□□□□ -0.54
C9orf3-219ENST00000488186 FUT9Q9Y231 359 aa11.7□□□□□ -0.54
C9orf3-219ENST00000488186 LOC102724200A0A096LPH7 203 aaPredicted RBP11.69□□□□□ -0.54
C9orf3-219ENST00000488186 TAS2R45P59539 299 aa11.69□□□□□ -0.54
C9orf3-219ENST00000488186 SERF2P84101 59 aa11.69□□□□□ -0.54
C9orf3-219ENST00000488186 TMUB2Q71RG4 321 aa11.69□□□□□ -0.54
C9orf3-219ENST00000488186 MIR17HGQ75NE6 70 aa11.69□□□□□ -0.54
C9orf3-219ENST00000488186 STHQ8IWL8 128 aa11.69□□□□□ -0.54
C9orf3-219ENST00000488186 OR10G4Q8NGN3 311 aa11.69□□□□□ -0.54
C9orf3-219ENST00000488186 OR10G9Q8NGN4 311 aa11.69□□□□□ -0.54
C9orf3-219ENST00000488186 OR10G7Q8NGN6 311 aa11.69□□□□□ -0.54
C9orf3-219ENST00000488186 OR2G3Q8NGZ4 309 aa11.69□□□□□ -0.54
C9orf3-219ENST00000488186 ASCL2Q99929 193 aa11.69□□□□□ -0.54
C9orf3-219ENST00000488186 RFNGQ9Y644 331 aa11.69□□□□□ -0.54
C9orf3-219ENST00000488186 A0A087X0K7 114 aa11.68□□□□□ -0.54
C9orf3-219ENST00000488186 BCL2L11O43521 198 aa11.68□□□□□ -0.54
C9orf3-219ENST00000488186 SNRPCP09234 159 aaKnown RBP11.68□□□□□ -0.54
C9orf3-219ENST00000488186 CXCL2P19875 107 aa11.68□□□□□ -0.54
C9orf3-219ENST00000488186 EIF5AP63241 154 aaKnown RBP11.68□□□□□ -0.54
C9orf3-219ENST00000488186 ZNF124Q15973 351 aa11.68□□□□□ -0.54
C9orf3-219ENST00000488186 GUK1Q16774 197 aa11.68□□□□□ -0.54
C9orf3-219ENST00000488186 ZFP69Q49AA0 526 aa11.68□□□□□ -0.54
C9orf3-219ENST00000488186 SPATA31B1PQ5VZV4 182 aa11.68□□□□□ -0.54
C9orf3-219ENST00000488186 FAM122CQ6P4D5 195 aa11.68□□□□□ -0.54
C9orf3-219ENST00000488186 LCN15Q6UWW0 184 aa11.68□□□□□ -0.54
C9orf3-219ENST00000488186 ZNF471Q9BX82 626 aaPredicted RBP11.68□□□□□ -0.54
C9orf3-219ENST00000488186 RBMY1BA6NDE4 496 aaKnown RBP11.67□□□□□ -0.54
C9orf3-219ENST00000488186 RBMY1EA6NEQ0 496 aaKnown RBP11.67□□□□□ -0.54
C9orf3-219ENST00000488186 OR7C2O60412 319 aa11.67□□□□□ -0.54
C9orf3-219ENST00000488186 RBMY1DP0C7P1 496 aaKnown RBP11.67□□□□□ -0.54
C9orf3-219ENST00000488186 RPL35AP18077 110 aaKnown RBP11.67□□□□□ -0.54
C9orf3-219ENST00000488186 C4BPBP20851 252 aa11.67□□□□□ -0.54
C9orf3-219ENST00000488186 RAB2AP61019 212 aa11.67□□□□□ -0.54
C9orf3-219ENST00000488186 ACTL10Q5JWF8 245 aa11.67□□□□□ -0.54
C9orf3-219ENST00000488186 PAXXQ9BUH6 204 aa11.67□□□□□ -0.54
C9orf3-219ENST00000488186 SH3BGRL3Q9H299 93 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms