RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 RHOGP84095 191 aa11.27□□□□□ -0.61
CDK3-202ENST00000448471 Q56UQ5 140 aa11.27□□□□□ -0.61
CDK3-202ENST00000448471 S100A7AQ86SG5 101 aa11.27□□□□□ -0.61
CDK3-202ENST00000448471 ZNF491Q8N8L2 437 aa11.27□□□□□ -0.61
CDK3-202ENST00000448471 ZNF502Q8TBZ5 544 aa11.27□□□□□ -0.61
CDK3-202ENST00000448471 C11orf52Q96A22 123 aa11.27□□□□□ -0.61
CDK3-202ENST00000448471 RPUSD4Q96CM3 377 aaKnown RBP11.27□□□□□ -0.61
CDK3-202ENST00000448471 C20orf24Q9BUV8 137 aa11.27□□□□□ -0.61
CDK3-202ENST00000448471 H3BUA1 57 aa11.26□□□□□ -0.61
CDK3-202ENST00000448471 LYZP61626 148 aa11.26□□□□□ -0.61
CDK3-202ENST00000448471 UBE2L3P68036 154 aaKnown RBP11.26□□□□□ -0.61
CDK3-202ENST00000448471 TMEM241Q24JQ0 296 aa11.26□□□□□ -0.61
CDK3-202ENST00000448471 C15orf32Q32M92 178 aa11.26□□□□□ -0.61
CDK3-202ENST00000448471 TMEM88Q6PEY1 159 aa11.26□□□□□ -0.61
CDK3-202ENST00000448471 CBLN2Q8IUK8 224 aa11.26□□□□□ -0.61
CDK3-202ENST00000448471 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.26□□□□□ -0.61
CDK3-202ENST00000448471 Q8WTZ3 238 aa11.26□□□□□ -0.61
CDK3-202ENST00000448471 CTSGP08311 255 aa11.25□□□□□ -0.61
CDK3-202ENST00000448471 OR4F17Q8NGA8 305 aa11.25□□□□□ -0.61
CDK3-202ENST00000448471 FXYD5Q96DB9 178 aa11.25□□□□□ -0.61
CDK3-202ENST00000448471 RNF125Q96EQ8 232 aa11.25□□□□□ -0.61
CDK3-202ENST00000448471 TMEM14CQ9P0S9 112 aa11.25□□□□□ -0.61
CDK3-202ENST00000448471 TRBV7-1A0A0A6YYK4 115 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 FAM223BA6NKX1 122 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 AP4M1O00189 453 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 NUPL2O15504 423 aaKnown RBP11.24□□□□□ -0.61
CDK3-202ENST00000448471 NDUFB4O95168 129 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 OR10J4P0C629 311 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 CD28P10747 220 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 KIAA0141Q14154 515 aaPredicted RBP11.24□□□□□ -0.61
CDK3-202ENST00000448471 ZNF674Q2M3X9 581 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 C9orf152Q5JTZ5 239 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 ZNF343Q6P1L6 599 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 FAM223AQ8IWN6 122 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 EEF1AKMT3Q96AZ1 226 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 TCEAL7Q9BRU2 100 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 SHANK2-AS3Q9BTD1 123 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 SLC25A39Q9BZJ4 359 aaPredicted RBP11.24□□□□□ -0.61
CDK3-202ENST00000448471 NPFFR1Q9GZQ6 430 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 S4R3C0 116 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 K7EIL1 84 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 IL4P05112 153 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 PYYP10082 97 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 GP9P14770 177 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 PPIFP30405 207 aaKnown RBP11.24□□□□□ -0.61
CDK3-202ENST00000448471 NDUFA11Q86Y39 141 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 TMEM190Q8WZ59 177 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 PRELID1Q9Y255 219 aa11.24□□□□□ -0.61
CDK3-202ENST00000448471 SCO2A0A1W2PP80 73 aa11.23□□□□□ -0.61
CDK3-202ENST00000448471 OR2T8A6NH00 312 aa11.23□□□□□ -0.61
CDK3-202ENST00000448471 GGTLC3B5MD39 225 aa11.23□□□□□ -0.61
CDK3-202ENST00000448471 H3BRN7 92 aa11.23□□□□□ -0.61
CDK3-202ENST00000448471 IGLL1P15814 213 aa11.23□□□□□ -0.61
CDK3-202ENST00000448471 AKR1C3P42330 323 aa11.23□□□□□ -0.61
CDK3-202ENST00000448471 BLCAPP62952 87 aa11.23□□□□□ -0.61
CDK3-202ENST00000448471 TMEM242Q9NWH2 141 aa11.23□□□□□ -0.61
CDK3-202ENST00000448471 RNF24Q9Y225 148 aa11.23□□□□□ -0.61
CDK3-202ENST00000448471 NOTCH3Q9UM47 2321 aa11.22□□□□□ -0.61
CDK3-202ENST00000448471 CXorf65A6NEN9 183 aa11.22□□□□□ -0.61
CDK3-202ENST00000448471 ADARB2-AS1A8MUL3 147 aa11.22□□□□□ -0.61
CDK3-202ENST00000448471 TSPAN4O14817 238 aa11.22□□□□□ -0.61
CDK3-202ENST00000448471 S100A7P31151 101 aa11.22□□□□□ -0.61
CDK3-202ENST00000448471 ADMP35318 185 aa11.22□□□□□ -0.61
CDK3-202ENST00000448471 RPL23P62829 140 aaKnown RBP11.22□□□□□ -0.61
CDK3-202ENST00000448471 ATP5G2Q06055 141 aa11.22□□□□□ -0.61
CDK3-202ENST00000448471 ZNF600Q6ZNG1 722 aa11.22□□□□□ -0.61
CDK3-202ENST00000448471 C15orf54Q8N8G6 183 aa11.22□□□□□ -0.61
CDK3-202ENST00000448471 CITED2Q99967 270 aaPredicted RBP11.22□□□□□ -0.61
CDK3-202ENST00000448471 CTDSP1Q9GZU7 261 aa11.22□□□□□ -0.61
CDK3-202ENST00000448471 ZNF702PQ9H963 129 aa11.22□□□□□ -0.61
CDK3-202ENST00000448471 SERTAD4Q9NUC0 356 aa11.22□□□□□ -0.61
CDK3-202ENST00000448471 IGHV3-23P01764 117 aa11.21□□□□□ -0.61
CDK3-202ENST00000448471 CLEC3BP05452 202 aa11.21□□□□□ -0.61
CDK3-202ENST00000448471 NBEAP1P0C6P0 100 aa11.21□□□□□ -0.61
CDK3-202ENST00000448471 HIST1H1EP10412 219 aaKnown RBP11.21□□□□□ -0.61
CDK3-202ENST00000448471 CD33P20138 364 aa11.21□□□□□ -0.61
CDK3-202ENST00000448471 SUMO1P63165 101 aaKnown RBP11.21□□□□□ -0.61
CDK3-202ENST00000448471 USMG5Q96IX5 58 aa11.21□□□□□ -0.61
CDK3-202ENST00000448471 CCDC140Q96MF4 163 aa11.21□□□□□ -0.61
CDK3-202ENST00000448471 WWC2-AS2Q96NR7 200 aa11.21□□□□□ -0.61
CDK3-202ENST00000448471 CHRDL1Q9BU40 450 aa11.21□□□□□ -0.61
CDK3-202ENST00000448471 LY96Q9Y6Y9 160 aa11.21□□□□□ -0.61
CDK3-202ENST00000448471 C9JCJ5 164 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 TRGV3P03979 118 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 GPR183P32249 361 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 MYCNOSP40205 109 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 ADIRFQ15847 76 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 USF2Q15853 346 aaPredicted RBP11.2□□□□□ -0.62
CDK3-202ENST00000448471 DEFB121Q5J5C9 76 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 BPIFA4PQ86YQ2 179 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 WFDC9Q8NEX5 89 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 MS4A10Q96PG2 267 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 DERL1Q9BUN8 251 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 LINC00527Q9UJ94 153 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 ZNF98A6NK75 572 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 COLCA2A8K830 154 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 TGOLN2O43493 480 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 IGLV1-40P01703 118 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 MT-ND4LP03901 98 aa11.2□□□□□ -0.62
CDK3-202ENST00000448471 CFHR3Q02985 330 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms