RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 MXRA5Q9NR99 2828 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 H7C2Y5 167 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 NBR2O15453 112 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 PITX3O75364 302 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 ADAP1O75689 374 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 SNAPC5O75971 98 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 S1PR2O95136 353 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 NDUFA3O95167 84 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 CRYZL1O95825 349 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 IGKV1-39P01597 117 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 IGKV1-5P01602 117 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 IGKV1-16P04430 117 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 IGKV1D-39P04432 117 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 CHTF8P0CG12 524 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 CXCL3P19876 107 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 MDKP21741 143 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 REG1BP48304 166 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 AKR1C2P52895 323 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 UBE2KP61086 200 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 PRB3Q04118 309 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 IL15RAQ13261 267 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 VMA21Q3ZAQ7 101 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 CTRB2Q6GPI1 263 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 OTOGQ6ZRI0 2925 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 H2BFWTQ7Z2G1 175 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 LYZL2Q7Z4W2 148 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 ZNF429Q86V71 674 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 PDZD9Q8IXQ8 264 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 TCTE3Q8IZS6 198 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 TMEM61Q8N0U2 210 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 PUSL1Q8N0Z8 303 aaKnown RBP3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 DYNAPQ8N1N2 210 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 Q8N6K4 173 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 SLC35G3Q8N808 338 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 DRAXINQ8NBI3 349 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 NPBQ8NG41 125 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 OR2T10Q8NGZ9 312 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 OR52E5Q8NH55 327 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 OR4A5Q8NH83 315 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 PPP1R14BQ96C90 147 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 OR10C1Q96KK4 312 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 C2orf50Q96LR7 162 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 NMES1Q9C002 83 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 ZNF436Q9C0F3 470 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 ZNF331Q9NQX6 463 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 FKBP11Q9NYL4 201 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 PITPNC1Q9UKF7 332 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 HILPDAQ9Y5L2 63 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 NSD1Q96L73 2696 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 SETXQ7Z333 2677 aaKnown RBP3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 A0A1W2PRD5 423 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 A0A1W2PRF3 423 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 A0A1W2PRM7 423 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 M0QZK8 103 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 UPK2O00526 184 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 GOSR2O14653 212 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 AGPAT2O15120 278 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 FGF16O43320 207 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 CCNKO75909 580 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 KRASP01116 189 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 IGKV1D-33P01593 117 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 IGKV1-33P01594 117 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 IGLV2-23P01705 113 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 CRYGBP07316 175 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 CD99P14209 185 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 MAS1LP35410 378 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 RPS10P46783 165 aaKnown RBP3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 H2BFSP57053 126 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 SMCO1Q147U7 214 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 IAH1Q2TAA2 248 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 LRRC75BQ2VPJ9 315 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 THOC7Q6I9Y2 204 aaKnown RBP3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 BRD3OSQ6XYD6 125 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 Q6ZVH6 145 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 AKAP14Q86UN6 197 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 TMEM86BQ8N661 226 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 RNASE11Q8TAA1 199 aaKnown RBP3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 TMEM167AQ8TBQ9 72 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 PIFOQ8TCI5 191 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 PPP1R1CQ8WVI7 109 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 C17orf50Q8WW18 174 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 GPR146Q96CH1 333 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 PDCD10Q9BUL8 212 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 RANBP3Q9H6Z4 567 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 TMEM14BQ9NUH8 114 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 PRNDQ9UKY0 176 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 ZNF257Q9Y2Q1 563 aa3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 FN1P02751 2386 aaKnown RBP3.22□□□□□ -1.89
HMGB3P19-201ENST00000403971 IGHV3-72A0A0B4J1Y9 119 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 A6NDX4 124 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 BTBD17A6NE02 478 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 HMSDA8MTL9 139 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 FAM25EA8MYX2 175 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 INS-IGF2F8WCM5 200 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 G3V3Q6 166 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 PFDN1O60925 122 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 MED6O75586 246 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR2F2O95006 317 aa3.21□□□□□ -1.9
HMGB3P19-201ENST00000403971 MPC2O95563 127 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms