RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 TAX1BP3O14907 124 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 APCSP02743 223 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 MPC1LP0DKB6 136 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 BCL2P10415 239 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 HOXC5Q00444 222 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 CIRBPQ14011 172 aaKnown RBP2.68□□□□□ -1.98
XRN1-202ENST00000392981 VGLL1Q99990 258 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 TIMM9Q9Y5J7 89 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 NUP98P52948 1817 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 CCL15-CCL14A0A0B4J2E2 113 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 MCRIP1C9JLW8 97 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 UPK1AO00322 258 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 EDIL3O43854 480 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 SRSF10O75494 262 aaKnown RBP2.68□□□□□ -1.98
XRN1-202ENST00000392981 SLC25A16P16260 332 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 CCL14Q16627 93 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 Q56UQ5 140 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 PRSS54Q6PEW0 395 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 SAXO1Q8IYX7 474 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 IGF2BP2-AS1Q96M15 143 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 PRELID3AQ96N28 172 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 CCL13Q99616 98 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 UQCR10Q9UDW1 63 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 TBX21Q9UL17 535 aa2.68□□□□□ -1.98
XRN1-202ENST00000392981 IGHV1-45A0A0A0MS14 117 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 FFAR1O14842 300 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 ADCYAP1P18509 176 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 TMEM258P61165 79 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 RFLNAQ6ZTI6 216 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 LINC00305Q7Z4B0 112 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 FAM57AQ8TBR7 257 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 TSPAN32Q96QS1 320 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 MGST2Q99735 147 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 MRPL16Q9NX20 251 aaKnown RBP2.67□□□□□ -1.98
XRN1-202ENST00000392981 CACFD1Q9UGQ2 172 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 FUT9Q9Y231 359 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 A0A0B4J2C4 111 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 HMSDA8MTL9 139 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 RBFOX2O43251 390 aaKnown RBP eCLIP2.67□□□□□ -1.98
XRN1-202ENST00000392981 CD14P08571 375 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 OPRM1P35372 400 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 BTG2P78543 158 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 FAM182AQ5T1J6 154 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 MRPL54Q6P161 138 aaKnown RBP2.67□□□□□ -1.98
XRN1-202ENST00000392981 SLC25A29Q8N8R3 303 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 SLAMF6Q96DU3 332 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 TNRC6CQ9HCJ0 1690 aaKnown RBP2.67□□□□□ -1.98
XRN1-202ENST00000392981 LRP5O75197 1615 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 CTRLP40313 264 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 OR5C1Q8NGR4 320 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 DEFB126Q9BYW3 111 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 CTSZQ9UBR2 303 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 RFNGQ9Y644 331 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 TRAV21A0A0B4J279 112 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 LOC102725191A0A1B0GVB3 256 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 UBL3O95164 117 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 TRGC2P03986 189 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 SELENOWP63302 87 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 ZNF79Q15937 498 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 PMCHL1Q16048 86 aa2.67□□□□□ -1.98
XRN1-202ENST00000392981 PLA2G10O15496 165 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 SFTA3P0C7M3 94 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 SMIM13P0DJ93 91 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 TNFAIP6P98066 277 aaPredicted RBP2.66□□□□□ -1.98
XRN1-202ENST00000392981 SLC25A34Q6PIV7 304 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 LYZL4Q96KX0 146 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 LINC00470Q9BZP3 86 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 OR5AC2Q9NZP5 309 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 ERG28Q9UKR5 140 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 A0A0G2JMZ2 1700 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 CCL1P22362 96 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 LORP23490 312 aaPredicted RBP2.66□□□□□ -1.98
XRN1-202ENST00000392981 HLA-DMBP28068 263 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 RPS25P62851 125 aaKnown RBP2.66□□□□□ -1.98
XRN1-202ENST00000392981 PRR3P79522 188 aaKnown RBP2.66□□□□□ -1.98
XRN1-202ENST00000392981 CCSMST1Q4G0I0 132 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 C5orf17Q8NAS9 161 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 OR8A1Q8NGG7 326 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 ZNF501Q96CX3 271 aaPredicted RBP2.66□□□□□ -1.98
XRN1-202ENST00000392981 AQP10Q96PS8 301 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 PRADC1Q9BSG0 188 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 PHLDA3Q9Y5J5 127 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 C10orf71Q711Q0 1435 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 SPINK4O60575 86 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 HSPB1P04792 205 aaKnown RBP2.66□□□□□ -1.98
XRN1-202ENST00000392981 CXCL1P09341 107 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 CMC4P56277 68 aaPredicted RBP2.66□□□□□ -1.98
XRN1-202ENST00000392981 ERHP84090 104 aaKnown RBP2.66□□□□□ -1.98
XRN1-202ENST00000392981 SPANXN5Q5MJ07 72 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 EXOC3-AS1Q8N2X6 119 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 FLVCR1-AS1Q8TAF5 88 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 TOMM6Q96B49 74 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 HIST1H2BLQ99880 126 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 PMCHL2Q9BQD1 86 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 NPCDR1Q9BY65 106 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 AMMECR1Q9Y4X0 333 aaPredicted RBP2.66□□□□□ -1.98
XRN1-202ENST00000392981 ADAMTS20P59510 1910 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 LCTP09848 1927 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 SERF1AO75920 110 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 CRYGDP07320 174 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms