RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SMIM12Q96EX1 92 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 NUDT11Q96G61 164 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 SHANK2-AS3Q9BTD1 123 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 C7orf69Q9H7B7 122 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 PAM16Q9Y3D7 125 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 MED13LQ71F56 2210 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 H3BRN7 92 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 GNG7O60262 68 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 FAM106CPP0CH98 169 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 WDR73Q6P4I2 378 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 MBD6Q96DN6 1003 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 AJUBAQ96IF1 538 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 GPR82Q96P67 336 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 OTORQ9NRC9 128 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 TRAV30A0A087WSZ9 112 aa13.68□□□□□ -0.22
DDX28-201ENST00000332395 MT-ND6P03923 174 aa13.68□□□□□ -0.22
DDX28-201ENST00000332395 IL4P05112 153 aa13.68□□□□□ -0.22
DDX28-201ENST00000332395 ARL6IP6Q8N6S5 226 aa13.68□□□□□ -0.22
DDX28-201ENST00000332395 VN1R17PQ8TDU5 208 aa13.68□□□□□ -0.22
DDX28-201ENST00000332395 FMC1Q96HJ9 113 aa13.68□□□□□ -0.22
DDX28-201ENST00000332395 NAT8BQ9UHF3 227 aa13.68□□□□□ -0.22
DDX28-201ENST00000332395 SVEP1Q4LDE5 3571 aa13.68□□□□□ -0.22
DDX28-201ENST00000332395 SAA4P35542 130 aa13.68□□□□□ -0.22
DDX28-201ENST00000332395 MFAP4P55083 255 aa13.68□□□□□ -0.22
DDX28-201ENST00000332395 Q0VG73 95 aa13.68□□□□□ -0.22
DDX28-201ENST00000332395 COX19Q49B96 90 aa13.68□□□□□ -0.22
DDX28-201ENST00000332395 FAM120AOSQ5T036 256 aa13.68□□□□□ -0.22
DDX28-201ENST00000332395 MRPL54Q6P161 138 aaKnown RBP13.68□□□□□ -0.22
DDX28-201ENST00000332395 Q8N9W7 124 aa13.68□□□□□ -0.22
DDX28-201ENST00000332395 ZNF48Q96MX3 618 aaPredicted RBP13.68□□□□□ -0.22
DDX28-201ENST00000332395 IGHV7-81A0A0B4J1V7 117 aa13.67□□□□□ -0.22
DDX28-201ENST00000332395 IZUMO1RA6ND01 250 aa13.67□□□□□ -0.22
DDX28-201ENST00000332395 IGHV4-39P01824 125 aa13.67□□□□□ -0.22
DDX28-201ENST00000332395 TMEM136Q6ZRR5 245 aa13.67□□□□□ -0.22
DDX28-201ENST00000332395 BPIFA4PQ86YQ2 179 aa13.67□□□□□ -0.22
DDX28-201ENST00000332395 GRAMD2BQ96HH9 432 aa13.67□□□□□ -0.22
DDX28-201ENST00000332395 MLST8Q9BVC4 326 aa13.67□□□□□ -0.22
DDX28-201ENST00000332395 C1RLQ9NZP8 487 aa13.67□□□□□ -0.22
DDX28-201ENST00000332395 AKAP6Q13023 2319 aa13.67□□□□□ -0.22
DDX28-201ENST00000332395 WI2-2373I1.2A0A1W2PRP0 233 aa13.66□□□□□ -0.22
DDX28-201ENST00000332395 F8W735 103 aaPredicted RBP13.66□□□□□ -0.22
DDX28-201ENST00000332395 LTAP01374 205 aa13.66□□□□□ -0.22
DDX28-201ENST00000332395 AMY1AP04745 511 aa13.66□□□□□ -0.22
DDX28-201ENST00000332395 EGR2P11161 476 aaPredicted RBP13.66□□□□□ -0.22
DDX28-201ENST00000332395 EXOC3-AS1Q8N2X6 119 aa13.66□□□□□ -0.22
DDX28-201ENST00000332395 CHRDL1Q9BU40 450 aa13.66□□□□□ -0.22
DDX28-201ENST00000332395 THYN1Q9P016 225 aa13.66□□□□□ -0.22
DDX28-201ENST00000332395 Q56UQ5 140 aa13.66□□□□□ -0.22
DDX28-201ENST00000332395 BAGE3Q86Y29 109 aa13.66□□□□□ -0.22
DDX28-201ENST00000332395 SPOCK3Q9BQ16 436 aa13.66□□□□□ -0.22
DDX28-201ENST00000332395 C21orf62Q9NYP8 219 aa13.66□□□□□ -0.22
DDX28-201ENST00000332395 HLA-DRB1P01911 266 aa13.65□□□□□ -0.22
DDX28-201ENST00000332395 BATFQ16520 125 aa13.65□□□□□ -0.22
DDX28-201ENST00000332395 COL5A1-AS1Q5SY13 56 aa13.65□□□□□ -0.22
DDX28-201ENST00000332395 OR4F17Q8NGA8 305 aa13.65□□□□□ -0.22
DDX28-201ENST00000332395 SAMD10Q9BYL1 202 aa13.65□□□□□ -0.22
DDX28-201ENST00000332395 TRBV19A0A075B6N1 114 aa13.65□□□□□ -0.22
DDX28-201ENST00000332395 F2Z2F3 143 aa13.65□□□□□ -0.22
DDX28-201ENST00000332395 OR2J3O76001 311 aa13.65□□□□□ -0.22
DDX28-201ENST00000332395 NDUFB8O95169 186 aa13.65□□□□□ -0.22
DDX28-201ENST00000332395 IGLC2P0DOY2 106 aa13.65□□□□□ -0.22
DDX28-201ENST00000332395 OR4B1Q8NGF8 309 aa13.65□□□□□ -0.22
DDX28-201ENST00000332395 RNF24Q9Y225 148 aa13.65□□□□□ -0.22
DDX28-201ENST00000332395 HLA-DQA1P01909 254 aa13.64□□□□□ -0.23
DDX28-201ENST00000332395 FCGR2BP31994 310 aaPredicted RBP13.64□□□□□ -0.23
DDX28-201ENST00000332395 Q8N976 141 aa13.64□□□□□ -0.23
DDX28-201ENST00000332395 NUP35Q8NFH5 326 aa13.64□□□□□ -0.23
DDX28-201ENST00000332395 TSKUQ8WUA8 353 aa13.64□□□□□ -0.23
DDX28-201ENST00000332395 C17orf77Q96MU5 243 aa13.64□□□□□ -0.23
DDX28-201ENST00000332395 FBXL7Q9UJT9 491 aa13.64□□□□□ -0.23
DDX28-201ENST00000332395 TMEM8BA6NDV4 472 aa13.64□□□□□ -0.23
DDX28-201ENST00000332395 DMRTA1Q5VZB9 504 aa13.64□□□□□ -0.23
DDX28-201ENST00000332395 BCL6BQ8N143 479 aaPredicted RBP13.64□□□□□ -0.23
DDX28-201ENST00000332395 ZFP30Q9Y2G7 519 aa13.64□□□□□ -0.23
DDX28-201ENST00000332395 RNF114Q9Y508 228 aa13.64□□□□□ -0.23
DDX28-201ENST00000332395 TRAV8-1A0A0A6YYK1 113 aa13.63□□□□□ -0.23
DDX28-201ENST00000332395 NPFFO15130 113 aa13.63□□□□□ -0.23
DDX28-201ENST00000332395 MRPS12O15235 138 aaKnown RBP13.63□□□□□ -0.23
DDX28-201ENST00000332395 IGHV3-23P01764 117 aa13.63□□□□□ -0.23
DDX28-201ENST00000332395 LINC00322Q6ZN03 302 aaPredicted RBP13.63□□□□□ -0.23
DDX28-201ENST00000332395 Q86TA4 180 aa13.63□□□□□ -0.23
DDX28-201ENST00000332395 PIP4P2Q8N4L2 257 aa13.63□□□□□ -0.23
DDX28-201ENST00000332395 SIGLECL1Q8N7X8 197 aa13.63□□□□□ -0.23
DDX28-201ENST00000332395 ZNF331Q9NQX6 463 aaPredicted RBP13.63□□□□□ -0.23
DDX28-201ENST00000332395 CFAP46Q8IYW2 2715 aa13.63□□□□□ -0.23
DDX28-201ENST00000332395 GPX1P07203 203 aa13.62□□□□□ -0.23
DDX28-201ENST00000332395 CTRLP40313 264 aa13.62□□□□□ -0.23
DDX28-201ENST00000332395 SIGLEC15Q6ZMC9 328 aa13.62□□□□□ -0.23
DDX28-201ENST00000332395 GOLT1AQ6ZVE7 132 aa13.62□□□□□ -0.23
DDX28-201ENST00000332395 S100A7AQ86SG5 101 aa13.62□□□□□ -0.23
DDX28-201ENST00000332395 OR2T8A6NH00 312 aa13.62□□□□□ -0.23
DDX28-201ENST00000332395 HIGD1CA8MV81 97 aa13.62□□□□□ -0.23
DDX28-201ENST00000332395 IGLV2-11P01706 119 aa13.62□□□□□ -0.23
DDX28-201ENST00000332395 TFPI2P48307 235 aa13.62□□□□□ -0.23
DDX28-201ENST00000332395 KIAA1644Q3SXP7 199 aa13.62□□□□□ -0.23
DDX28-201ENST00000332395 RASL11AQ6T310 242 aa13.62□□□□□ -0.23
DDX28-201ENST00000332395 WIPF2Q8TF74 440 aaPredicted RBP13.62□□□□□ -0.23
DDX28-201ENST00000332395 TMEM190Q8WZ59 177 aa13.62□□□□□ -0.23
DDX28-201ENST00000332395 ZNF492Q9P255 531 aa13.62□□□□□ -0.23
DDX28-201ENST00000332395 CENPVL3A0A0U1RRI6 287 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms