RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 SBF2Q86WG5 1849 aa17.15■□□□□ 0.34
RNF40-201ENST00000324685 TAF1LQ8IZX4 1826 aa17.15■□□□□ 0.34
RNF40-201ENST00000324685 C15orf62A8K5M9 175 aa17.15■□□□□ 0.34
RNF40-201ENST00000324685 C6orf226Q5I0X4 101 aa17.15■□□□□ 0.34
RNF40-201ENST00000324685 ASCL4Q6XD76 172 aa17.15■□□□□ 0.34
RNF40-201ENST00000324685 BRCA1P38398 1863 aaKnown RBP17.15■□□□□ 0.34
RNF40-201ENST00000324685 OCIAD2Q56VL3 154 aa17.15■□□□□ 0.34
RNF40-201ENST00000324685 TRAV8-1A0A0A6YYK1 113 aa17.14■□□□□ 0.33
RNF40-201ENST00000324685 MPV17L2Q567V2 206 aa17.14■□□□□ 0.33
RNF40-201ENST00000324685 BMPERQ8N8U9 685 aa17.14■□□□□ 0.33
RNF40-201ENST00000324685 H3BUX3 64 aa17.14■□□□□ 0.33
RNF40-201ENST00000324685 MESP1Q9BRJ9 268 aa17.14■□□□□ 0.33
RNF40-201ENST00000324685 PLXNA1Q9UIW2 1896 aa17.14■□□□□ 0.33
RNF40-201ENST00000324685 HEATR5BQ9P2D3 2071 aa17.13■□□□□ 0.33
RNF40-201ENST00000324685 LY6G5BQ8NDX9 201 aa17.13■□□□□ 0.33
RNF40-201ENST00000324685 DOCK4Q8N1I0 1966 aa17.13■□□□□ 0.33
RNF40-201ENST00000324685 RNASE2P10153 161 aaKnown RBP17.13■□□□□ 0.33
RNF40-201ENST00000324685 CHAC1Q9BUX1 264 aa17.13■□□□□ 0.33
RNF40-201ENST00000324685 UBE2V1Q13404 147 aa17.13■□□□□ 0.33
RNF40-201ENST00000324685 PDE6HQ13956 83 aa17.12■□□□□ 0.33
RNF40-201ENST00000324685 PRR31Q5SQ13 230 aa17.12■□□□□ 0.33
RNF40-201ENST00000324685 CD5LO43866 347 aa17.12■□□□□ 0.33
RNF40-201ENST00000324685 PIP4P2Q8N4L2 257 aa17.12■□□□□ 0.33
RNF40-201ENST00000324685 SS18Q15532 418 aa17.12■□□□□ 0.33
RNF40-201ENST00000324685 C17orf82Q86X59 251 aaPredicted RBP17.12■□□□□ 0.33
RNF40-201ENST00000324685 IGHV3-53P01767 116 aa17.12■□□□□ 0.33
RNF40-201ENST00000324685 ZC2HC1BQ5TFG8 222 aa17.12■□□□□ 0.33
RNF40-201ENST00000324685 C1orf159Q96HA4 380 aa17.12■□□□□ 0.33
RNF40-201ENST00000324685 SHANK2-AS3Q9BTD1 123 aa17.12■□□□□ 0.33
RNF40-201ENST00000324685 RNF166Q96A37 237 aaPredicted RBP17.11■□□□□ 0.33
RNF40-201ENST00000324685 KLF12Q9Y4X4 402 aa17.11■□□□□ 0.33
RNF40-201ENST00000324685 SELENOKQ9Y6D0 94 aa17.11■□□□□ 0.33
RNF40-201ENST00000324685 LY6DQ14210 128 aa17.11■□□□□ 0.33
RNF40-201ENST00000324685 IGKV1D-17A0A075B6S4 117 aa17.11■□□□□ 0.33
RNF40-201ENST00000324685 RPL35AP18077 110 aaKnown RBP17.1■□□□□ 0.33
RNF40-201ENST00000324685 GREB1LQ9C091 1923 aaPredicted RBP17.1■□□□□ 0.33
RNF40-201ENST00000324685 TRAV8-3A0A0A6YYJ7 113 aa17.1■□□□□ 0.33
RNF40-201ENST00000324685 FOXL2NBQ6ZUU3 175 aa17.1■□□□□ 0.33
RNF40-201ENST00000324685 TRPT1Q86TN4 253 aaKnown RBP17.1■□□□□ 0.33
RNF40-201ENST00000324685 AMN1Q8IY45 258 aa17.1■□□□□ 0.33
RNF40-201ENST00000324685 RHPN1-AS1Q9BWJ2 59 aa17.1■□□□□ 0.33
RNF40-201ENST00000324685 LOC285556D6RIA3 1793 aa17.1■□□□□ 0.33
RNF40-201ENST00000324685 MDS2Q8NDY4 140 aa17.1■□□□□ 0.33
RNF40-201ENST00000324685 SCN2AQ99250 2005 aa17.1■□□□□ 0.33
RNF40-201ENST00000324685 Q0VFX4 171 aa17.1■□□□□ 0.33
RNF40-201ENST00000324685 PYY3Q5JQD4 70 aa17.1■□□□□ 0.33
RNF40-201ENST00000324685 TMEM75Q8N9X5 138 aa17.1■□□□□ 0.33
RNF40-201ENST00000324685 ZNF48Q96MX3 618 aaPredicted RBP17.1■□□□□ 0.33
RNF40-201ENST00000324685 ZNF492Q9P255 531 aa17.1■□□□□ 0.33
RNF40-201ENST00000324685 MBD3L4A6NDZ8 208 aaPredicted RBP17.1■□□□□ 0.33
RNF40-201ENST00000324685 MBD3L3A6NE82 208 aaPredicted RBP17.1■□□□□ 0.33
RNF40-201ENST00000324685 MBD3L5A6NJ08 208 aaPredicted RBP17.1■□□□□ 0.33
RNF40-201ENST00000324685 NEGR1Q7Z3B1 354 aa17.1■□□□□ 0.33
RNF40-201ENST00000324685 MBD3L2Q8NHZ7 208 aaPredicted RBP17.1■□□□□ 0.33
RNF40-201ENST00000324685 PRIMA1Q86XR5 153 aa17.09■□□□□ 0.33
RNF40-201ENST00000324685 LIME1Q9H400 295 aa17.09■□□□□ 0.33
RNF40-201ENST00000324685 A0A0G2JMZ2 1700 aa17.09■□□□□ 0.33
RNF40-201ENST00000324685 LRRC37A2A6NM11 1700 aa17.09■□□□□ 0.33
RNF40-201ENST00000324685 A0A0G2JNJ9 132 aa17.09■□□□□ 0.33
RNF40-201ENST00000324685 Q9UFV3 132 aa17.09■□□□□ 0.33
RNF40-201ENST00000324685 SMKR1H3BMG3 65 aa17.08■□□□□ 0.33
RNF40-201ENST00000324685 C5orf63A6NC05 138 aa17.08■□□□□ 0.32
RNF40-201ENST00000324685 INS-IGF2F8WCM5 200 aa17.08■□□□□ 0.32
RNF40-201ENST00000324685 Q0VG73 95 aa17.08■□□□□ 0.32
RNF40-201ENST00000324685 DEFB104AQ8WTQ1 72 aa17.08■□□□□ 0.32
RNF40-201ENST00000324685 DAZ1Q9NQZ3 744 aaKnown RBP17.08■□□□□ 0.32
RNF40-201ENST00000324685 BRD3OSQ6XYD6 125 aa17.08■□□□□ 0.32
RNF40-201ENST00000324685 IGFL4Q6B9Z1 124 aa17.07■□□□□ 0.32
RNF40-201ENST00000324685 SEC16AO15027 2179 aa17.07■□□□□ 0.32
RNF40-201ENST00000324685 TRAV13-1A0A0B4J241 112 aa17.07■□□□□ 0.32
RNF40-201ENST00000324685 SPXQ9BT56 116 aa17.07■□□□□ 0.32
RNF40-201ENST00000324685 EDA2RQ9HAV5 297 aa17.07■□□□□ 0.32
RNF40-201ENST00000324685 SPTBP11277 2137 aa17.07■□□□□ 0.32
RNF40-201ENST00000324685 A0A087WWL8 130 aa17.06■□□□□ 0.32
RNF40-201ENST00000324685 GAGE2AQ6NT46 116 aa17.06■□□□□ 0.32
RNF40-201ENST00000324685 B3GALT5-AS1P59052 145 aa17.06■□□□□ 0.32
RNF40-201ENST00000324685 CRIPAKQ8N1N5 446 aa17.06■□□□□ 0.32
RNF40-201ENST00000324685 KLHL30-AS1Q8NEE0 82 aa17.06■□□□□ 0.32
RNF40-201ENST00000324685 PSCAO43653 123 aa17.06■□□□□ 0.32
RNF40-201ENST00000324685 TMEM141Q96I45 108 aa17.06■□□□□ 0.32
RNF40-201ENST00000324685 NYNRINQ9P2P1 1898 aaKnown RBP17.06■□□□□ 0.32
RNF40-201ENST00000324685 A0A0G2JRQ6 117 aa17.05■□□□□ 0.32
RNF40-201ENST00000324685 FAM231BA6NCW3 169 aa17.05■□□□□ 0.32
RNF40-201ENST00000324685 ZNF664Q8N3J9 261 aa17.05■□□□□ 0.32
RNF40-201ENST00000324685 SLC25A16P16260 332 aa17.05■□□□□ 0.32
RNF40-201ENST00000324685 LCNL1Q6ZST4 164 aa17.05■□□□□ 0.32
RNF40-201ENST00000324685 ADAMTSL5Q6ZMM2 481 aa17.05■□□□□ 0.32
RNF40-201ENST00000324685 C5orf24Q7Z6I8 188 aa17.04■□□□□ 0.32
RNF40-201ENST00000324685 CHD5Q8TDI0 1954 aa17.04■□□□□ 0.32
RNF40-201ENST00000324685 RNF144BQ7Z419 303 aa17.04■□□□□ 0.32
RNF40-201ENST00000324685 IGHG3P01860 377 aa17.04■□□□□ 0.32
RNF40-201ENST00000324685 UBE2E2Q96LR5 201 aa17.04■□□□□ 0.32
RNF40-201ENST00000324685 ANAPC10Q9UM13 185 aa17.04■□□□□ 0.32
RNF40-201ENST00000324685 C9JAW5 83 aa17.03■□□□□ 0.32
RNF40-201ENST00000324685 NDUFB8O95169 186 aa17.03■□□□□ 0.32
RNF40-201ENST00000324685 ARMS2P0C7Q2 107 aa17.03■□□□□ 0.32
RNF40-201ENST00000324685 PDCD11Q14690 1871 aaKnown RBP17.03■□□□□ 0.32
RNF40-201ENST00000324685 CT83Q5H943 113 aa17.03■□□□□ 0.32
RNF40-201ENST00000324685 LINC01356Q8N9X3 169 aa17.03■□□□□ 0.32
RNF40-201ENST00000324685 SPANXA1Q9NS26 97 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms