RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 FSCN3Q9NQT6 498 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 LINC01549A6NIU2 74 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 A6NJY4 79 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 LINC01619G3V211 115 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 IFI27P40305 119 aaPredicted RBP3.81□□□□□ -1.8
PTPN13-201ENST00000316707 MRAP2Q96G30 205 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 JMJD8Q96S16 334 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 SPANXA1Q9NS26 97 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 DPM2O94777 84 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 TCTAP57738 103 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 GAGE13Q4V321 117 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 ZNF562Q6V9R5 426 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 ATG2AQ2TAZ0 1938 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 GPR179Q6PRD1 2367 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 PTPRSQ13332 1948 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 ATP6V0E2Q8NHE4 81 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 RITA1Q96K30 269 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 OR11H12B2RN74 326 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 CEACAM4O75871 244 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 IGLV2-11P01706 119 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 SMAGPQ0VAQ4 97 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 C10orf55Q5SWW7 151 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 PRSS57Q6UWY2 283 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 OR11H1Q8NG94 326 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 OR11H2Q8NH07 326 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 ABHD17AQ96GS6 310 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 TP73-AS1Q9UF72 201 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 FER1L5A0AVI2 2057 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 PPIAL4EA0A075B759 164 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 A0A096LNJ9 63 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 A0A1W2PRD5 423 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 A0A1W2PRF3 423 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 A0A1W2PRM7 423 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 IGKCP01834 107 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 PPIAL4FP0DN26 164 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 AZU1P20160 251 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 HOXA4Q00056 320 aaPredicted RBP3.8□□□□□ -1.8
PTPN13-201ENST00000316707 SRSF2Q01130 221 aaKnown RBP3.8□□□□□ -1.8
PTPN13-201ENST00000316707 LYZL1Q6UWQ5 148 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 C2orf16Q68DN1 1984 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 ZC2HC1BQ5TFG8 222 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 HCP5Q6MZN7 132 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 SIGLEC15Q6ZMC9 328 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 FZR1Q9UM11 496 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 GOLGB1Q14789 3259 aaKnown RBP3.8□□□□□ -1.8
PTPN13-201ENST00000316707 MBD3L4A6NDZ8 208 aaPredicted RBP3.8□□□□□ -1.8
PTPN13-201ENST00000316707 MBD3L3A6NE82 208 aaPredicted RBP3.8□□□□□ -1.8
PTPN13-201ENST00000316707 MBD3L5A6NJ08 208 aaPredicted RBP3.8□□□□□ -1.8
PTPN13-201ENST00000316707 NCBP2LA6PVI3 153 aaKnown RBP3.8□□□□□ -1.8
PTPN13-201ENST00000316707 IGLL5B9A064 214 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 NDUFS7O75251 213 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 C9orf106Q8NAJ2 232 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 MBD3L2Q8NHZ7 208 aaPredicted RBP3.8□□□□□ -1.8
PTPN13-201ENST00000316707 NHP2Q9NX24 153 aaKnown RBP3.8□□□□□ -1.8
PTPN13-201ENST00000316707 CYSLTR1Q9Y271 337 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 TRBV25-1A0A075B6N4 114 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 TRAV8-1A0A0A6YYK1 113 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 ZNF474Q6S9Z5 364 aaPredicted RBP3.8□□□□□ -1.8
PTPN13-201ENST00000316707 TDHQ8IZJ6 230 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 RNF125Q96EQ8 232 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 ZC2HC1AQ96GY0 325 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 MRPL36Q9P0J6 103 aaKnown RBP3.8□□□□□ -1.8
PTPN13-201ENST00000316707 NCR2O95944 276 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 IGLV2-23P01705 113 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 IGHV1-46P01743 117 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 ZMAT4Q9H898 229 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 KAAG1Q9UBP8 84 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 PI4KAP42356 2102 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 H3BRN7 92 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 M0R1B8 84 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 PPP1R27Q86WC6 154 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 MCRIP2Q9BUT9 160 aaKnown RBP3.8□□□□□ -1.8
PTPN13-201ENST00000316707 GTSF1LQ9H1H1 148 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 MRPL16Q9NX20 251 aaKnown RBP3.8□□□□□ -1.8
PTPN13-201ENST00000316707 INSIG2Q9Y5U4 225 aa3.8□□□□□ -1.8
PTPN13-201ENST00000316707 IGKV1-17P01599 117 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 RRN3P1Q2M238 152 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 ETDBQ3ZM63 59 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 TSSC4Q9Y5U2 329 aaPredicted RBP3.79□□□□□ -1.8
PTPN13-201ENST00000316707 THADAQ6YHU6 1953 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 RBP4P02753 201 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 AMN1Q8IY45 258 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 CNFNQ9BYD5 112 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 SPANXB1Q9NS25 103 aaPredicted RBP3.79□□□□□ -1.8
PTPN13-201ENST00000316707 RP1L1Q8IWN7 2480 aaPredicted RBP3.79□□□□□ -1.8
PTPN13-201ENST00000316707 A0A1B0GWB2 263 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 PLNP26678 52 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 MRPL51Q4U2R6 128 aaKnown RBP3.79□□□□□ -1.8
PTPN13-201ENST00000316707 PCP2Q8IVA1 136 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 MYOZ3Q8TDC0 251 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 ZNF48Q96MX3 618 aaPredicted RBP3.79□□□□□ -1.8
PTPN13-201ENST00000316707 TPRP12270 2363 aaKnown RBP3.79□□□□□ -1.8
PTPN13-201ENST00000316707 DOCK11Q5JSL3 2073 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 FABP5P3A8MUU1 101 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 PATE3B3GLJ2 98 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 TMEM262E9PQX1 116 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 H3BTX0 84 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 COL8A2P25067 703 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 CD40P25942 277 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 TMEM155Q4W5P6 130 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms