RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 HIVEP1P15822 2718 aa17.59■□□□□ 0.41
SMARCB1-201ENST00000263121 IGLC2P0DOY2 106 aa17.58■□□□□ 0.41
SMARCB1-201ENST00000263121 MTORP42345 2549 aa17.58■□□□□ 0.4
SMARCB1-201ENST00000263121 H3BQ15 152 aa17.58■□□□□ 0.4
SMARCB1-201ENST00000263121 SNRPCP09234 159 aaKnown RBP17.58■□□□□ 0.4
SMARCB1-201ENST00000263121 LGALS1P09382 135 aaKnown RBP17.58■□□□□ 0.4
SMARCB1-201ENST00000263121 METTL26Q96S19 204 aa17.58■□□□□ 0.4
SMARCB1-201ENST00000263121 NKX6-2Q9C056 277 aaPredicted RBP17.58■□□□□ 0.4
SMARCB1-201ENST00000263121 ZNF586Q9NXT0 402 aa17.58■□□□□ 0.4
SMARCB1-201ENST00000263121 U3KQE9 123 aa17.58■□□□□ 0.4
SMARCB1-201ENST00000263121 CRYBB3P26998 211 aa17.57■□□□□ 0.4
SMARCB1-201ENST00000263121 ATRAIDQ6UW56 229 aa17.57■□□□□ 0.4
SMARCB1-201ENST00000263121 UNQ9165/PRO28630Q6UXU0 137 aa17.57■□□□□ 0.4
SMARCB1-201ENST00000263121 BLNKQ8WV28 456 aa17.57■□□□□ 0.4
SMARCB1-201ENST00000263121 C11orf52Q96A22 123 aa17.57■□□□□ 0.4
SMARCB1-201ENST00000263121 BAHCC1Q9P281 2608 aa17.57■□□□□ 0.4
SMARCB1-201ENST00000263121 SCO2A0A1W2PP80 73 aa17.56■□□□□ 0.4
SMARCB1-201ENST00000263121 BUB3O43684 328 aa17.56■□□□□ 0.4
SMARCB1-201ENST00000263121 MYCNOSP40205 109 aa17.56■□□□□ 0.4
SMARCB1-201ENST00000263121 TCTEX1D4Q5JR98 221 aa17.56■□□□□ 0.4
SMARCB1-201ENST00000263121 OR4F17Q8NGA8 305 aa17.56■□□□□ 0.4
SMARCB1-201ENST00000263121 C20orf24Q9BUV8 137 aa17.56■□□□□ 0.4
SMARCB1-201ENST00000263121 PARLQ9H300 379 aa17.56■□□□□ 0.4
SMARCB1-201ENST00000263121 CRLF1O75462 422 aa17.55■□□□□ 0.4
SMARCB1-201ENST00000263121 RPL7P18124 248 aaKnown RBP17.55■□□□□ 0.4
SMARCB1-201ENST00000263121 SUMO1P63165 101 aaKnown RBP17.55■□□□□ 0.4
SMARCB1-201ENST00000263121 TMEM190Q8WZ59 177 aa17.55■□□□□ 0.4
SMARCB1-201ENST00000263121 RPUSD4Q96CM3 377 aaKnown RBP17.55■□□□□ 0.4
SMARCB1-201ENST00000263121 NDUFA7O95182 113 aa17.55■□□□□ 0.4
SMARCB1-201ENST00000263121 SNAPINO95295 136 aa17.55■□□□□ 0.4
SMARCB1-201ENST00000263121 FAM74A3Q4VXF1 159 aa17.55■□□□□ 0.4
SMARCB1-201ENST00000263121 LINC01006Q8NI28 216 aa17.55■□□□□ 0.4
SMARCB1-201ENST00000263121 ELOVL1Q9BW60 279 aa17.55■□□□□ 0.4
SMARCB1-201ENST00000263121 TRBV19A0A075B6N1 114 aa17.54■□□□□ 0.4
SMARCB1-201ENST00000263121 ZNF727A8MUV8 499 aa17.54■□□□□ 0.4
SMARCB1-201ENST00000263121 H3BTX0 84 aa17.54■□□□□ 0.4
SMARCB1-201ENST00000263121 ZNF207O43670 478 aaKnown RBP17.54■□□□□ 0.4
SMARCB1-201ENST00000263121 NDUFB4O95168 129 aa17.54■□□□□ 0.4
SMARCB1-201ENST00000263121 RANP62826 216 aaKnown RBP17.54■□□□□ 0.4
SMARCB1-201ENST00000263121 C1orf194Q5T5A4 169 aa17.54■□□□□ 0.4
SMARCB1-201ENST00000263121 OR8I2Q8N0Y5 310 aa17.54■□□□□ 0.4
SMARCB1-201ENST00000263121 CLRN3Q8NCR9 226 aa17.54■□□□□ 0.4
SMARCB1-201ENST00000263121 SMIM7Q9BQ49 75 aa17.54■□□□□ 0.4
SMARCB1-201ENST00000263121 NIPSNAP3BQ9BS92 247 aa17.54■□□□□ 0.4
SMARCB1-201ENST00000263121 SCO1O75880 301 aa17.53■□□□□ 0.4
SMARCB1-201ENST00000263121 APOHP02749 345 aaPredicted RBP17.53■□□□□ 0.4
SMARCB1-201ENST00000263121 CDX1P47902 265 aaPredicted RBP17.53■□□□□ 0.4
SMARCB1-201ENST00000263121 GPHB5Q86YW7 130 aa17.53■□□□□ 0.4
SMARCB1-201ENST00000263121 TCF21O43680 179 aa17.52■□□□□ 0.4
SMARCB1-201ENST00000263121 ZNF674Q2M3X9 581 aa17.52■□□□□ 0.4
SMARCB1-201ENST00000263121 C17orf77Q96MU5 243 aa17.52■□□□□ 0.4
SMARCB1-201ENST00000263121 GPR82Q96P67 336 aa17.52■□□□□ 0.39
SMARCB1-201ENST00000263121 TCEAL7Q9BRU2 100 aa17.52■□□□□ 0.39
SMARCB1-201ENST00000263121 DERL1Q9BUN8 251 aa17.52■□□□□ 0.39
SMARCB1-201ENST00000263121 Q9H3A6 140 aa17.52■□□□□ 0.39
SMARCB1-201ENST00000263121 SMAD5-AS1Q9Y6J3 95 aa17.52■□□□□ 0.39
SMARCB1-201ENST00000263121 CYSRT1A8MQ03 144 aa17.51■□□□□ 0.39
SMARCB1-201ENST00000263121 PDE6HQ13956 83 aa17.51■□□□□ 0.39
SMARCB1-201ENST00000263121 FAM106AQ4KMX7 169 aa17.51■□□□□ 0.39
SMARCB1-201ENST00000263121 TVP23CQ96ET8 276 aa17.51■□□□□ 0.39
SMARCB1-201ENST00000263121 IGHV4OR15-8A0A075B7B6 117 aa17.5■□□□□ 0.39
SMARCB1-201ENST00000263121 A0A087WW49 117 aa17.5■□□□□ 0.39
SMARCB1-201ENST00000263121 AWAT1Q58HT5 328 aa17.5■□□□□ 0.39
SMARCB1-201ENST00000263121 C2CD4CQ8TF44 421 aa17.5■□□□□ 0.39
SMARCB1-201ENST00000263121 SDF2L1Q9HCN8 221 aa17.5■□□□□ 0.39
SMARCB1-201ENST00000263121 OTORQ9NRC9 128 aa17.5■□□□□ 0.39
SMARCB1-201ENST00000263121 NSD1Q96L73 2696 aaPredicted RBP17.5■□□□□ 0.39
SMARCB1-201ENST00000263121 IGHV3-49A0A0A0MS15 119 aa17.49■□□□□ 0.39
SMARCB1-201ENST00000263121 IGHV3-66A0A0C4DH42 116 aa17.49■□□□□ 0.39
SMARCB1-201ENST00000263121 ZNF320A2RRD8 509 aa17.49■□□□□ 0.39
SMARCB1-201ENST00000263121 PGPA6NDG6 321 aa17.49■□□□□ 0.39
SMARCB1-201ENST00000263121 RPEL1Q2QD12 228 aa17.49■□□□□ 0.39
SMARCB1-201ENST00000263121 SIGLEC15Q6ZMC9 328 aa17.49■□□□□ 0.39
SMARCB1-201ENST00000263121 C18orf65Q6ZTR6 163 aa17.49■□□□□ 0.39
SMARCB1-201ENST00000263121 LYPD1Q8N2G4 141 aa17.49■□□□□ 0.39
SMARCB1-201ENST00000263121 C4orf3Q8WVX3 66 aa17.49■□□□□ 0.39
SMARCB1-201ENST00000263121 WFDC12Q8WWY7 111 aa17.49■□□□□ 0.39
SMARCB1-201ENST00000263121 NAT8Q9UHE5 227 aa17.49■□□□□ 0.39
SMARCB1-201ENST00000263121 IGHV3OR16-13A0A075B7E8 117 aa17.48■□□□□ 0.39
SMARCB1-201ENST00000263121 A0A087X0K7 114 aa17.48■□□□□ 0.39
SMARCB1-201ENST00000263121 IGHV3-74A0A0B4J1X5 117 aa17.48■□□□□ 0.39
SMARCB1-201ENST00000263121 K7EMT4 169 aa17.48■□□□□ 0.39
SMARCB1-201ENST00000263121 M0R036 132 aa17.48■□□□□ 0.39
SMARCB1-201ENST00000263121 SLC17A3O00476 420 aa17.48■□□□□ 0.39
SMARCB1-201ENST00000263121 C16orf54Q6UWD8 224 aa17.48■□□□□ 0.39
SMARCB1-201ENST00000263121 DAZ1Q9NQZ3 744 aaKnown RBP17.48■□□□□ 0.39
SMARCB1-201ENST00000263121 FN1P02751 2386 aaKnown RBP17.48■□□□□ 0.39
SMARCB1-201ENST00000263121 PNRC1Q12796 327 aaPredicted RBP17.48■□□□□ 0.39
SMARCB1-201ENST00000263121 TMEM241Q24JQ0 296 aa17.48■□□□□ 0.39
SMARCB1-201ENST00000263121 C5orf17Q8NAS9 161 aa17.48■□□□□ 0.39
SMARCB1-201ENST00000263121 GLMPQ8WWB7 406 aa17.48■□□□□ 0.39
SMARCB1-201ENST00000263121 SLC25A5P05141 298 aaKnown RBP17.47■□□□□ 0.39
SMARCB1-201ENST00000263121 ATF4P18848 351 aaPredicted RBP17.47■□□□□ 0.39
SMARCB1-201ENST00000263121 GALR1P47211 349 aa17.47■□□□□ 0.39
SMARCB1-201ENST00000263121 EXOC3-AS1Q8N2X6 119 aa17.47■□□□□ 0.39
SMARCB1-201ENST00000263121 EPDR1Q9UM22 224 aa17.47■□□□□ 0.39
SMARCB1-201ENST00000263121 TRBV20OR9-2A0A075B6H5 130 aa17.46■□□□□ 0.39
SMARCB1-201ENST00000263121 IGHV7-4-1A0A0J9YVY3 117 aa17.46■□□□□ 0.39
SMARCB1-201ENST00000263121 PEX7O00628 323 aa17.46■□□□□ 0.39
SMARCB1-201ENST00000263121 ZNF253O75346 499 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms