RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 GGTLC3B5MD39 225 aa10□□□□□ -0.81
VAMP7-201ENST00000262640 MRPS12O15235 138 aaKnown RBP10□□□□□ -0.81
VAMP7-201ENST00000262640 LGALS1P09382 135 aaKnown RBP10□□□□□ -0.81
VAMP7-201ENST00000262640 NPPCP23582 126 aa10□□□□□ -0.81
VAMP7-201ENST00000262640 C11orf52Q96A22 123 aa10□□□□□ -0.81
VAMP7-201ENST00000262640 RPUSD4Q96CM3 377 aaKnown RBP10□□□□□ -0.81
VAMP7-201ENST00000262640 OR5B12Q96R08 314 aa10□□□□□ -0.81
VAMP7-201ENST00000262640 NIPSNAP3BQ9BS92 247 aa10□□□□□ -0.81
VAMP7-201ENST00000262640 C20orf24Q9BUV8 137 aa10□□□□□ -0.81
VAMP7-201ENST00000262640 IGLC2P0DOY2 106 aa10□□□□□ -0.81
VAMP7-201ENST00000262640 CRYBB3P26998 211 aa10□□□□□ -0.81
VAMP7-201ENST00000262640 SUMO1P63165 101 aaKnown RBP10□□□□□ -0.81
VAMP7-201ENST00000262640 GPR82Q96P67 336 aa10□□□□□ -0.81
VAMP7-201ENST00000262640 SMIM7Q9BQ49 75 aa10□□□□□ -0.81
VAMP7-201ENST00000262640 TCEAL7Q9BRU2 100 aa10□□□□□ -0.81
VAMP7-201ENST00000262640 PARLQ9H300 379 aa10□□□□□ -0.81
VAMP7-201ENST00000262640 ZNF586Q9NXT0 402 aa10□□□□□ -0.81
VAMP7-201ENST00000262640 FLNBO75369 2602 aaKnown RBP10□□□□□ -0.81
VAMP7-201ENST00000262640 SCO2A0A1W2PP80 73 aa9.99□□□□□ -0.81
VAMP7-201ENST00000262640 ZNF727A8MUV8 499 aa9.99□□□□□ -0.81
VAMP7-201ENST00000262640 H3BQ15 152 aa9.99□□□□□ -0.81
VAMP7-201ENST00000262640 C1orf194Q5T5A4 169 aa9.99□□□□□ -0.81
VAMP7-201ENST00000262640 OR8I2Q8N0Y5 310 aa9.99□□□□□ -0.81
VAMP7-201ENST00000262640 CLRN3Q8NCR9 226 aa9.99□□□□□ -0.81
VAMP7-201ENST00000262640 TMEM190Q8WZ59 177 aa9.99□□□□□ -0.81
VAMP7-201ENST00000262640 BUB3O43684 328 aa9.99□□□□□ -0.81
VAMP7-201ENST00000262640 NDUFB4O95168 129 aa9.99□□□□□ -0.81
VAMP7-201ENST00000262640 NDUFA7O95182 113 aa9.99□□□□□ -0.81
VAMP7-201ENST00000262640 RANP62826 216 aaKnown RBP9.99□□□□□ -0.81
VAMP7-201ENST00000262640 ZNF674Q2M3X9 581 aa9.99□□□□□ -0.81
VAMP7-201ENST00000262640 FAM106AQ4KMX7 169 aa9.99□□□□□ -0.81
VAMP7-201ENST00000262640 U3KQE9 123 aa9.99□□□□□ -0.81
VAMP7-201ENST00000262640 TRBV19A0A075B6N1 114 aa9.98□□□□□ -0.81
VAMP7-201ENST00000262640 CRLF1O75462 422 aa9.98□□□□□ -0.81
VAMP7-201ENST00000262640 SNRPCP09234 159 aaKnown RBP9.98□□□□□ -0.81
VAMP7-201ENST00000262640 MYCNOSP40205 109 aa9.98□□□□□ -0.81
VAMP7-201ENST00000262640 ATRAIDQ6UW56 229 aa9.98□□□□□ -0.81
VAMP7-201ENST00000262640 UNQ9165/PRO28630Q6UXU0 137 aa9.98□□□□□ -0.81
VAMP7-201ENST00000262640 GPHB5Q86YW7 130 aa9.98□□□□□ -0.81
VAMP7-201ENST00000262640 WIPF2Q8TF74 440 aaPredicted RBP9.98□□□□□ -0.81
VAMP7-201ENST00000262640 TVP23CQ96ET8 276 aa9.98□□□□□ -0.81
VAMP7-201ENST00000262640 ELOVL1Q9BW60 279 aa9.98□□□□□ -0.81
VAMP7-201ENST00000262640 M0R036 132 aa9.98□□□□□ -0.81
VAMP7-201ENST00000262640 TCF21O43680 179 aa9.98□□□□□ -0.81
VAMP7-201ENST00000262640 CDX1P47902 265 aaPredicted RBP9.98□□□□□ -0.81
VAMP7-201ENST00000262640 PDE6HQ13956 83 aa9.98□□□□□ -0.81
VAMP7-201ENST00000262640 OTORQ9NRC9 128 aa9.98□□□□□ -0.81
VAMP7-201ENST00000262640 MTORP42345 2549 aa9.98□□□□□ -0.81
VAMP7-201ENST00000262640 H3BTX0 84 aa9.97□□□□□ -0.81
VAMP7-201ENST00000262640 ZNF207O43670 478 aaKnown RBP9.97□□□□□ -0.81
VAMP7-201ENST00000262640 LYPD1Q8N2G4 141 aa9.97□□□□□ -0.81
VAMP7-201ENST00000262640 LINC01006Q8NI28 216 aa9.97□□□□□ -0.81
VAMP7-201ENST00000262640 Q9H3A6 140 aa9.97□□□□□ -0.81
VAMP7-201ENST00000262640 NAT8Q9UHE5 227 aa9.97□□□□□ -0.81
VAMP7-201ENST00000262640 HIVEP1P15822 2718 aa9.97□□□□□ -0.81
VAMP7-201ENST00000262640 ZNF320A2RRD8 509 aa9.97□□□□□ -0.81
VAMP7-201ENST00000262640 SCO1O75880 301 aa9.97□□□□□ -0.81
VAMP7-201ENST00000262640 ATF4P18848 351 aaPredicted RBP9.97□□□□□ -0.81
VAMP7-201ENST00000262640 PNRC1Q12796 327 aaPredicted RBP9.97□□□□□ -0.81
VAMP7-201ENST00000262640 TMEM241Q24JQ0 296 aa9.97□□□□□ -0.81
VAMP7-201ENST00000262640 RPEL1Q2QD12 228 aa9.97□□□□□ -0.81
VAMP7-201ENST00000262640 AWAT1Q58HT5 328 aa9.97□□□□□ -0.81
VAMP7-201ENST00000262640 TCTEX1D4Q5JR98 221 aa9.97□□□□□ -0.81
VAMP7-201ENST00000262640 WFDC12Q8WWY7 111 aa9.97□□□□□ -0.81
VAMP7-201ENST00000262640 PGPA6NDG6 321 aa9.96□□□□□ -0.81
VAMP7-201ENST00000262640 GALR1P47211 349 aa9.96□□□□□ -0.81
VAMP7-201ENST00000262640 C4orf3Q8WVX3 66 aa9.96□□□□□ -0.81
VAMP7-201ENST00000262640 SDF2L1Q9HCN8 221 aa9.96□□□□□ -0.81
VAMP7-201ENST00000262640 A0A1W2PS18 150 aa9.96□□□□□ -0.82
VAMP7-201ENST00000262640 K7EMT4 169 aa9.96□□□□□ -0.82
VAMP7-201ENST00000262640 APOHP02749 345 aaPredicted RBP9.96□□□□□ -0.82
VAMP7-201ENST00000262640 SLC25A5P05141 298 aaKnown RBP9.96□□□□□ -0.82
VAMP7-201ENST00000262640 RHEBQ15382 184 aa9.96□□□□□ -0.82
VAMP7-201ENST00000262640 C5orf17Q8NAS9 161 aa9.96□□□□□ -0.82
VAMP7-201ENST00000262640 C2CD4CQ8TF44 421 aa9.96□□□□□ -0.82
VAMP7-201ENST00000262640 HIST1H2BAQ96A08 127 aa9.96□□□□□ -0.82
VAMP7-201ENST00000262640 GRAMD2BQ96HH9 432 aa9.96□□□□□ -0.82
VAMP7-201ENST00000262640 C17orf77Q96MU5 243 aa9.96□□□□□ -0.82
VAMP7-201ENST00000262640 DERL1Q9BUN8 251 aa9.96□□□□□ -0.82
VAMP7-201ENST00000262640 DAZ1Q9NQZ3 744 aaKnown RBP9.96□□□□□ -0.82
VAMP7-201ENST00000262640 UFC1Q9Y3C8 167 aa9.96□□□□□ -0.82
VAMP7-201ENST00000262640 A0A087X0K7 114 aa9.95□□□□□ -0.82
VAMP7-201ENST00000262640 C16orf54Q6UWD8 224 aa9.95□□□□□ -0.82
VAMP7-201ENST00000262640 EPDR1Q9UM22 224 aa9.95□□□□□ -0.82
VAMP7-201ENST00000262640 SMAD5-AS1Q9Y6J3 95 aa9.95□□□□□ -0.82
VAMP7-201ENST00000262640 BAHCC1Q9P281 2608 aa9.95□□□□□ -0.82
VAMP7-201ENST00000262640 IGHV4OR15-8A0A075B7B6 117 aa9.95□□□□□ -0.82
VAMP7-201ENST00000262640 A0A087WW49 117 aa9.95□□□□□ -0.82
VAMP7-201ENST00000262640 IGHV3-66A0A0C4DH42 116 aa9.95□□□□□ -0.82
VAMP7-201ENST00000262640 PEX7O00628 323 aa9.95□□□□□ -0.82
VAMP7-201ENST00000262640 ZNF253O75346 499 aa9.95□□□□□ -0.82
VAMP7-201ENST00000262640 RPL35P42766 123 aaKnown RBP9.95□□□□□ -0.82
VAMP7-201ENST00000262640 PSG9Q00887 426 aa9.95□□□□□ -0.82
VAMP7-201ENST00000262640 KHDC1LQ5JSQ8 128 aa9.95□□□□□ -0.82
VAMP7-201ENST00000262640 SIGLEC15Q6ZMC9 328 aa9.95□□□□□ -0.82
VAMP7-201ENST00000262640 IGHV3OR16-13A0A075B7E8 117 aa9.94□□□□□ -0.82
VAMP7-201ENST00000262640 IGHV3-49A0A0A0MS15 119 aa9.94□□□□□ -0.82
VAMP7-201ENST00000262640 IGHV3-74A0A0B4J1X5 117 aa9.94□□□□□ -0.82
VAMP7-201ENST00000262640 HELTA6NFD8 242 aa9.94□□□□□ -0.82
VAMP7-201ENST00000262640 ZNF785A8K8V0 405 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms