RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 RHOGP84095 191 aa11.28□□□□□ -0.6
HCFC2-201ENST00000229330 CT83Q5H943 113 aa11.28□□□□□ -0.6
HCFC2-201ENST00000229330 ZNF562Q6V9R5 426 aa11.28□□□□□ -0.6
HCFC2-201ENST00000229330 Q86TA4 180 aa11.28□□□□□ -0.6
HCFC2-201ENST00000229330 RPUSD1Q9UJJ7 312 aaKnown RBP11.28□□□□□ -0.6
HCFC2-201ENST00000229330 NTN3O00634 580 aaPredicted RBP11.28□□□□□ -0.6
HCFC2-201ENST00000229330 SH2D1AO60880 128 aa11.28□□□□□ -0.6
HCFC2-201ENST00000229330 ARMS2P0C7Q2 107 aa11.28□□□□□ -0.6
HCFC2-201ENST00000229330 FAM231DQ6ZW35 169 aa11.28□□□□□ -0.6
HCFC2-201ENST00000229330 SPACA3Q8IXA5 215 aa11.28□□□□□ -0.6
HCFC2-201ENST00000229330 COL4A6Q14031 1691 aa11.28□□□□□ -0.6
HCFC2-201ENST00000229330 SRSF6Q13247 344 aaKnown RBP11.28□□□□□ -0.6
HCFC2-201ENST00000229330 SMKR1H3BMG3 65 aa11.27□□□□□ -0.6
HCFC2-201ENST00000229330 IGKV3-20P01619 116 aa11.27□□□□□ -0.61
HCFC2-201ENST00000229330 C2orf82Q6UX34 121 aa11.27□□□□□ -0.61
HCFC2-201ENST00000229330 DEFB125Q8N687 156 aa11.27□□□□□ -0.61
HCFC2-201ENST00000229330 SRRM5B3KS81 715 aa11.27□□□□□ -0.61
HCFC2-201ENST00000229330 M0R2P5 195 aa11.27□□□□□ -0.61
HCFC2-201ENST00000229330 METRNQ9UJH8 293 aa11.27□□□□□ -0.61
HCFC2-201ENST00000229330 FANCMQ8IYD8 2048 aa11.27□□□□□ -0.61
HCFC2-201ENST00000229330 SNRPD3P62318 126 aaKnown RBP11.27□□□□□ -0.61
HCFC2-201ENST00000229330 TDRG1Q3Y452 100 aa11.27□□□□□ -0.61
HCFC2-201ENST00000229330 CD177Q8N6Q3 437 aa11.27□□□□□ -0.61
HCFC2-201ENST00000229330 NUP37Q8NFH4 326 aa11.27□□□□□ -0.61
HCFC2-201ENST00000229330 C11orf52Q96A22 123 aa11.27□□□□□ -0.61
HCFC2-201ENST00000229330 RNASE2P10153 161 aaKnown RBP11.26□□□□□ -0.61
HCFC2-201ENST00000229330 KLF12Q9Y4X4 402 aa11.26□□□□□ -0.61
HCFC2-201ENST00000229330 ESPL1Q14674 2120 aa11.26□□□□□ -0.61
HCFC2-201ENST00000229330 TRAV21A0A0B4J279 112 aa11.26□□□□□ -0.61
HCFC2-201ENST00000229330 NBR2O15453 112 aa11.26□□□□□ -0.61
HCFC2-201ENST00000229330 NUPR1O60356 82 aa11.26□□□□□ -0.61
HCFC2-201ENST00000229330 TRBV7-9A0A0J9YWB2 115 aa11.26□□□□□ -0.61
HCFC2-201ENST00000229330 MLANAQ16655 118 aa11.26□□□□□ -0.61
HCFC2-201ENST00000229330 TMEM167AQ8TBQ9 72 aa11.26□□□□□ -0.61
HCFC2-201ENST00000229330 TNFRSF6BO95407 300 aa11.26□□□□□ -0.61
HCFC2-201ENST00000229330 CLEC2AQ6UVW9 174 aa11.26□□□□□ -0.61
HCFC2-201ENST00000229330 PRSS57Q6UWY2 283 aa11.26□□□□□ -0.61
HCFC2-201ENST00000229330 CLEC19AQ6UXS0 136 aa11.26□□□□□ -0.61
HCFC2-201ENST00000229330 MBNL3Q9NUK0 354 aaKnown RBP11.26□□□□□ -0.61
HCFC2-201ENST00000229330 CD24P25063 80 aa11.26□□□□□ -0.61
HCFC2-201ENST00000229330 MED12Q93074 2177 aa11.25□□□□□ -0.61
HCFC2-201ENST00000229330 IL18BPO95998 194 aa11.25□□□□□ -0.61
HCFC2-201ENST00000229330 LGALS9BQ3B8N2 356 aa11.25□□□□□ -0.61
HCFC2-201ENST00000229330 LGALS9CQ6DKI2 356 aa11.25□□□□□ -0.61
HCFC2-201ENST00000229330 LCNL1Q6ZST4 164 aa11.25□□□□□ -0.61
HCFC2-201ENST00000229330 PPDPFLQ8WWR9 84 aa11.25□□□□□ -0.61
HCFC2-201ENST00000229330 TMEM133Q9H2Q1 129 aa11.25□□□□□ -0.61
HCFC2-201ENST00000229330 TRAV40A0A0B4J280 105 aa11.25□□□□□ -0.61
HCFC2-201ENST00000229330 GGTLC3B5MD39 225 aa11.25□□□□□ -0.61
HCFC2-201ENST00000229330 C9JAW5 83 aa11.25□□□□□ -0.61
HCFC2-201ENST00000229330 C1orf122Q6ZSJ8 110 aa11.25□□□□□ -0.61
HCFC2-201ENST00000229330 PINLYPA6NC86 204 aa11.25□□□□□ -0.61
HCFC2-201ENST00000229330 TRGV3P03979 118 aa11.25□□□□□ -0.61
HCFC2-201ENST00000229330 CD59P13987 128 aa11.25□□□□□ -0.61
HCFC2-201ENST00000229330 CNTFRP26992 372 aa11.24□□□□□ -0.61
HCFC2-201ENST00000229330 VWC2Q2TAL6 325 aa11.24□□□□□ -0.61
HCFC2-201ENST00000229330 RIF1Q5UIP0 2472 aaKnown RBP11.24□□□□□ -0.61
HCFC2-201ENST00000229330 LYPD1Q8N2G4 141 aa11.24□□□□□ -0.61
HCFC2-201ENST00000229330 RAX2Q96IS3 184 aa11.24□□□□□ -0.61
HCFC2-201ENST00000229330 ICE1Q9Y2F5 2266 aa11.24□□□□□ -0.61
HCFC2-201ENST00000229330 PHF3Q92576 2039 aaKnown RBP11.24□□□□□ -0.61
HCFC2-201ENST00000229330 IGHV3-64A0A075B6Q5 118 aa11.24□□□□□ -0.61
HCFC2-201ENST00000229330 TCF20Q9UGU0 1960 aaKnown RBP11.24□□□□□ -0.61
HCFC2-201ENST00000229330 B9A039 149 aa11.24□□□□□ -0.61
HCFC2-201ENST00000229330 CFHR2P36980 270 aa11.24□□□□□ -0.61
HCFC2-201ENST00000229330 THADAQ6YHU6 1953 aa11.24□□□□□ -0.61
HCFC2-201ENST00000229330 IGKV3OR2-268A0A0C4DH90 116 aa11.24□□□□□ -0.61
HCFC2-201ENST00000229330 TMEM8BA6NDV4 472 aa11.24□□□□□ -0.61
HCFC2-201ENST00000229330 C17orf100A8MU93 164 aa11.24□□□□□ -0.61
HCFC2-201ENST00000229330 K7EN84 100 aa11.24□□□□□ -0.61
HCFC2-201ENST00000229330 SLC25A15Q9Y619 301 aa11.24□□□□□ -0.61
HCFC2-201ENST00000229330 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.23□□□□□ -0.61
HCFC2-201ENST00000229330 PLSCR4Q9NRQ2 329 aa11.23□□□□□ -0.61
HCFC2-201ENST00000229330 RNF166Q96A37 237 aaPredicted RBP11.23□□□□□ -0.61
HCFC2-201ENST00000229330 ABHD17AQ96GS6 310 aa11.23□□□□□ -0.61
HCFC2-201ENST00000229330 IGHV3OR16-12A0A075B7B8 117 aa11.23□□□□□ -0.61
HCFC2-201ENST00000229330 SIVA1O15304 175 aa11.23□□□□□ -0.61
HCFC2-201ENST00000229330 FAM27E3Q08E93 113 aa11.23□□□□□ -0.61
HCFC2-201ENST00000229330 SPAG8Q99932 426 aaPredicted RBP11.22□□□□□ -0.61
HCFC2-201ENST00000229330 C9orf106Q8NAJ2 232 aa11.22□□□□□ -0.61
HCFC2-201ENST00000229330 ZNF524Q96C55 264 aa11.22□□□□□ -0.61
HCFC2-201ENST00000229330 TRBV20-1A0A075B6N2 111 aa11.22□□□□□ -0.61
HCFC2-201ENST00000229330 HAX1O00165 279 aa11.22□□□□□ -0.61
HCFC2-201ENST00000229330 FAM104BQ5XKR9 115 aa11.22□□□□□ -0.61
HCFC2-201ENST00000229330 PLEKHB2Q96CS7 222 aa11.22□□□□□ -0.61
HCFC2-201ENST00000229330 CD7P09564 240 aa11.22□□□□□ -0.61
HCFC2-201ENST00000229330 RRN3P1Q2M238 152 aa11.22□□□□□ -0.61
HCFC2-201ENST00000229330 CENPVQ7Z7K6 275 aaPredicted RBP11.22□□□□□ -0.61
HCFC2-201ENST00000229330 IGHV1-18A0A0C4DH31 117 aa11.22□□□□□ -0.61
HCFC2-201ENST00000229330 WISP1O95388 367 aa11.22□□□□□ -0.61
HCFC2-201ENST00000229330 RBMY1BA6NDE4 496 aaKnown RBP11.21□□□□□ -0.61
HCFC2-201ENST00000229330 RBMY1EA6NEQ0 496 aaKnown RBP11.21□□□□□ -0.61
HCFC2-201ENST00000229330 RBMY1DP0C7P1 496 aaKnown RBP11.21□□□□□ -0.61
HCFC2-201ENST00000229330 RBMY1A1P0DJD3 496 aaKnown RBP11.21□□□□□ -0.61
HCFC2-201ENST00000229330 RBMY1CP0DJD4 496 aa11.21□□□□□ -0.61
HCFC2-201ENST00000229330 KLF5Q13887 457 aaPredicted RBP11.21□□□□□ -0.61
HCFC2-201ENST00000229330 TMEM101Q96IK0 257 aa11.21□□□□□ -0.61
HCFC2-201ENST00000229330 TMEM213A2RRL7 107 aa11.21□□□□□ -0.61
HCFC2-201ENST00000229330 KIAA2026Q5HYC2 2103 aa11.21□□□□□ -0.61
HCFC2-201ENST00000229330 H0YJW9 148 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms