RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 FBXW7Q969H0 707 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 HELLSQ9NRZ9 838 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 GADD45BO75293 160 aaPredicted RBP13.62□□□□□ -0.23
ATRX-213ENST00000624032 ZFYP08048 801 aaPredicted RBP13.62□□□□□ -0.23
ATRX-213ENST00000624032 DALRD3Q5D0E6 543 aaKnown RBP13.62□□□□□ -0.23
ATRX-213ENST00000624032 ADGRA1Q86SQ6 560 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 APPBP2Q92624 585 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 USP25Q9UHP3 1055 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 CCDC171Q6TFL3 1326 aa13.61□□□□□ -0.23
ATRX-213ENST00000624032 RAD50Q92878 1312 aa13.61□□□□□ -0.23
ATRX-213ENST00000624032 WDR33Q9C0J8 1336 aaKnown RBP13.61□□□□□ -0.23
ATRX-213ENST00000624032 NOL8Q76FK4 1167 aaKnown RBP13.61□□□□□ -0.23
ATRX-213ENST00000624032 USP48Q86UV5 1035 aa13.61□□□□□ -0.23
ATRX-213ENST00000624032 ZNF830Q96NB3 372 aaPredicted RBP13.61□□□□□ -0.23
ATRX-213ENST00000624032 EYA3Q99504 573 aa13.61□□□□□ -0.23
ATRX-213ENST00000624032 MXD3Q9BW11 206 aa13.61□□□□□ -0.23
ATRX-213ENST00000624032 BCS1LQ9Y276 419 aa13.61□□□□□ -0.23
ATRX-213ENST00000624032 G3V3G9 751 aa13.61□□□□□ -0.23
ATRX-213ENST00000624032 GTF2IP78347 998 aa13.61□□□□□ -0.23
ATRX-213ENST00000624032 LRRFIP1Q32MZ4 808 aaKnown RBP13.61□□□□□ -0.23
ATRX-213ENST00000624032 CCDC93Q567U6 631 aa13.61□□□□□ -0.23
ATRX-213ENST00000624032 DCAF8Q5TAQ9 597 aa13.61□□□□□ -0.23
ATRX-213ENST00000624032 ZSCAN25Q6NSZ9 544 aa13.61□□□□□ -0.23
ATRX-213ENST00000624032 ZNF710Q8N1W2 664 aa13.61□□□□□ -0.23
ATRX-213ENST00000624032 RTFDC1Q9BY42 306 aaPredicted RBP13.61□□□□□ -0.23
ATRX-213ENST00000624032 GDPD2Q9HCC8 539 aa13.61□□□□□ -0.23
ATRX-213ENST00000624032 ZSCAN20P17040 1043 aaPredicted RBP13.6□□□□□ -0.23
ATRX-213ENST00000624032 UBE3CQ15386 1083 aa13.6□□□□□ -0.23
ATRX-213ENST00000624032 FOXD4L6Q3SYB3 417 aaPredicted RBP13.6□□□□□ -0.23
ATRX-213ENST00000624032 FOXD4L3Q6VB84 417 aaPredicted RBP13.6□□□□□ -0.23
ATRX-213ENST00000624032 MIGA1Q8NAN2 632 aa13.6□□□□□ -0.23
ATRX-213ENST00000624032 COA1Q9GZY4 146 aa13.6□□□□□ -0.23
ATRX-213ENST00000624032 KIF3AQ9Y496 699 aa13.6□□□□□ -0.23
ATRX-213ENST00000624032 ADCY5O95622 1261 aa13.6□□□□□ -0.23
ATRX-213ENST00000624032 CYP7A1P22680 504 aa13.6□□□□□ -0.23
ATRX-213ENST00000624032 CCDC183Q5T5S1 534 aa13.6□□□□□ -0.23
ATRX-213ENST00000624032 CC2D2BQ6DHV5 1058 aa13.6□□□□□ -0.23
ATRX-213ENST00000624032 ZNF277Q9NRM2 450 aaPredicted RBP13.6□□□□□ -0.23
ATRX-213ENST00000624032 ZHX1Q9UKY1 873 aaPredicted RBP13.6□□□□□ -0.23
ATRX-213ENST00000624032 BRCA1P38398 1863 aaKnown RBP13.6□□□□□ -0.23
ATRX-213ENST00000624032 SRCAPQ6ZRS2 3230 aa13.6□□□□□ -0.23
ATRX-213ENST00000624032 LETM1O95202 739 aaPredicted RBP13.6□□□□□ -0.23
ATRX-213ENST00000624032 MECOMQ03112 1051 aa13.6□□□□□ -0.23
ATRX-213ENST00000624032 TSC1Q92574 1164 aa13.6□□□□□ -0.23
ATRX-213ENST00000624032 TTC12Q9H892 705 aaPredicted RBP13.6□□□□□ -0.23
ATRX-213ENST00000624032 RBM8AQ9Y5S9 174 aaKnown RBP13.6□□□□□ -0.23
ATRX-213ENST00000624032 PDS5AQ29RF7 1337 aaKnown RBP13.59□□□□□ -0.23
ATRX-213ENST00000624032 GPAA1O43292 621 aa13.59□□□□□ -0.23
ATRX-213ENST00000624032 WDR66Q8TBY9 1149 aa13.59□□□□□ -0.23
ATRX-213ENST00000624032 FHDC1Q9C0D6 1143 aaPredicted RBP13.59□□□□□ -0.23
ATRX-213ENST00000624032 SPTLC3Q9NUV7 552 aa13.59□□□□□ -0.23
ATRX-213ENST00000624032 PPIP5K2O43314 1243 aa13.59□□□□□ -0.23
ATRX-213ENST00000624032 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
ATRX-213ENST00000624032 RTKN2Q8IZC4 609 aa13.59□□□□□ -0.23
ATRX-213ENST00000624032 MAP4K1Q92918 833 aa13.59□□□□□ -0.23
ATRX-213ENST00000624032 NSUN4Q96CB9 384 aaKnown RBP13.59□□□□□ -0.23
ATRX-213ENST00000624032 ECE2O60344 883 aa13.58□□□□□ -0.23
ATRX-213ENST00000624032 HSPA4P34932 840 aa13.58□□□□□ -0.23
ATRX-213ENST00000624032 NAA16Q6N069 864 aaPredicted RBP13.58□□□□□ -0.23
ATRX-213ENST00000624032 TMEM87AQ8NBN3 555 aa13.58□□□□□ -0.23
ATRX-213ENST00000624032 ARMT1Q9H993 441 aa13.58□□□□□ -0.23
ATRX-213ENST00000624032 FOXP2O15409 715 aa13.58□□□□□ -0.24
ATRX-213ENST00000624032 MBD4O95243 580 aa13.58□□□□□ -0.24
ATRX-213ENST00000624032 HSPD1P10809 573 aaKnown RBP13.58□□□□□ -0.24
ATRX-213ENST00000624032 MFSD14BQ5SR56 506 aa13.58□□□□□ -0.24
ATRX-213ENST00000624032 TICAM2Q86XR7 235 aa13.58□□□□□ -0.24
ATRX-213ENST00000624032 TAF6LQ9Y6J9 622 aa13.58□□□□□ -0.24
ATRX-213ENST00000624032 LDHBP07195 334 aaKnown RBP13.58□□□□□ -0.24
ATRX-213ENST00000624032 TTLL5Q6EMB2 1281 aa13.58□□□□□ -0.24
ATRX-213ENST00000624032 LCORLQ8N3X6 602 aa13.58□□□□□ -0.24
ATRX-213ENST00000624032 DYNLL1P63167 89 aaKnown RBP13.57□□□□□ -0.24
ATRX-213ENST00000624032 DIXDC1Q155Q3 683 aa13.57□□□□□ -0.24
ATRX-213ENST00000624032 C17orf53Q8N3J3 647 aaPredicted RBP13.57□□□□□ -0.24
ATRX-213ENST00000624032 CERS5Q8N5B7 392 aa13.57□□□□□ -0.24
ATRX-213ENST00000624032 AIDAQ96BJ3 306 aa13.57□□□□□ -0.24
ATRX-213ENST00000624032 SCN9AQ15858 1988 aa13.57□□□□□ -0.24
ATRX-213ENST00000624032 F8W031 263 aaPredicted RBP13.57□□□□□ -0.24
ATRX-213ENST00000624032 PRKAB2O43741 272 aa13.57□□□□□ -0.24
ATRX-213ENST00000624032 CBX1P83916 185 aa13.57□□□□□ -0.24
ATRX-213ENST00000624032 NECTIN1Q15223 517 aa13.57□□□□□ -0.24
ATRX-213ENST00000624032 DZIP1Q86YF9 867 aaKnown RBP13.57□□□□□ -0.24
ATRX-213ENST00000624032 SUPT20HQ8NEM7 779 aa13.57□□□□□ -0.24
ATRX-213ENST00000624032 STRBPQ96SI9 672 aaKnown RBP13.57□□□□□ -0.24
ATRX-213ENST00000624032 GTPBP4Q9BZE4 634 aaKnown RBP13.57□□□□□ -0.24
ATRX-213ENST00000624032 FAM205AQ6ZU69 1335 aa13.57□□□□□ -0.24
ATRX-213ENST00000624032 SALL1Q9NSC2 1324 aa13.57□□□□□ -0.24
ATRX-213ENST00000624032 PPP4R3BQ5MIZ7 849 aa13.56□□□□□ -0.24
ATRX-213ENST00000624032 IL17RAQ96F46 866 aa13.56□□□□□ -0.24
ATRX-213ENST00000624032 UPF3BQ9BZI7 483 aaKnown RBP13.56□□□□□ -0.24
ATRX-213ENST00000624032 SNX14Q9Y5W7 946 aa13.56□□□□□ -0.24
ATRX-213ENST00000624032 COL4A5P29400 1685 aa13.56□□□□□ -0.24
ATRX-213ENST00000624032 YDJCA8MPS7 323 aa13.56□□□□□ -0.24
ATRX-213ENST00000624032 CREB3L3Q68CJ9 461 aa13.56□□□□□ -0.24
ATRX-213ENST00000624032 PSMD1Q99460 953 aa13.56□□□□□ -0.24
ATRX-213ENST00000624032 SLC27A2O14975 620 aa13.55□□□□□ -0.24
ATRX-213ENST00000624032 ZBTB22O15209 634 aa13.55□□□□□ -0.24
ATRX-213ENST00000624032 KDM4AO75164 1064 aa13.55□□□□□ -0.24
ATRX-213ENST00000624032 SPTY2D1Q68D10 685 aaPredicted RBP13.55□□□□□ -0.24
ATRX-213ENST00000624032 LARGE2Q8N3Y3 721 aa13.55□□□□□ -0.24
ATRX-213ENST00000624032 CCDC88AQ3V6T2 1871 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms