RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 NBPF12Q5TAG4 269 aaPredicted RBP15.45■□□□□ 0.06
SNORD55-201ENST00000581525 CYP4F22Q6NT55 531 aa15.45■□□□□ 0.06
SNORD55-201ENST00000581525 RGMBQ6NW40 437 aa15.45■□□□□ 0.06
SNORD55-201ENST00000581525 FAM151AQ8WW52 585 aa15.45■□□□□ 0.06
SNORD55-201ENST00000581525 CCDC102AQ96A19 550 aa15.45■□□□□ 0.06
SNORD55-201ENST00000581525 VEZTQ9HBM0 779 aa15.45■□□□□ 0.06
SNORD55-201ENST00000581525 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
SNORD55-201ENST00000581525 RPAP1Q9BWH6 1393 aaPredicted RBP15.45■□□□□ 0.06
SNORD55-201ENST00000581525 SSC5DA1L4H1 1573 aa15.45■□□□□ 0.06
SNORD55-201ENST00000581525 MROH7-TTC4A0A0A0MT08 1334 aa15.44■□□□□ 0.06
SNORD55-201ENST00000581525 USP2O75604 605 aaPredicted RBP15.44■□□□□ 0.06
SNORD55-201ENST00000581525 DZIP1Q86YF9 867 aaKnown RBP15.44■□□□□ 0.06
SNORD55-201ENST00000581525 SNRKQ9NRH2 765 aa15.44■□□□□ 0.06
SNORD55-201ENST00000581525 FAM198AQ9UFP1 575 aa15.44■□□□□ 0.06
SNORD55-201ENST00000581525 RFX7Q2KHR2 1363 aa15.44■□□□□ 0.06
SNORD55-201ENST00000581525 TCP10L2B9ZVM9 353 aa15.43■□□□□ 0.06
SNORD55-201ENST00000581525 PPP1R12BO60237 982 aaPredicted RBP15.43■□□□□ 0.06
SNORD55-201ENST00000581525 ENTPD3O75355 529 aa15.43■□□□□ 0.06
SNORD55-201ENST00000581525 IFIT2P09913 472 aaKnown RBP15.43■□□□□ 0.06
SNORD55-201ENST00000581525 MAP3K10Q02779 954 aa15.43■□□□□ 0.06
SNORD55-201ENST00000581525 ARMC9Q7Z3E5 817 aa15.43■□□□□ 0.06
SNORD55-201ENST00000581525 PIH1D3Q9NQM4 214 aaKnown RBP15.43■□□□□ 0.06
SNORD55-201ENST00000581525 USP40Q9NVE5 1235 aa15.43■□□□□ 0.06
SNORD55-201ENST00000581525 WBP1LQ9NX94 342 aa15.43■□□□□ 0.06
SNORD55-201ENST00000581525 TMOD2Q9NZR1 351 aa15.43■□□□□ 0.06
SNORD55-201ENST00000581525 LRP2BPQ9P2M1 347 aa15.43■□□□□ 0.06
SNORD55-201ENST00000581525 THSD7BQ9C0I4 1608 aa15.43■□□□□ 0.06
SNORD55-201ENST00000581525 UBE2Q2LH0YL09 131 aa15.42■□□□□ 0.06
SNORD55-201ENST00000581525 SLC10A3P09131 477 aa15.42■□□□□ 0.06
SNORD55-201ENST00000581525 NOGQ13253 232 aa15.42■□□□□ 0.06
SNORD55-201ENST00000581525 MOB2Q70IA6 237 aa15.42■□□□□ 0.06
SNORD55-201ENST00000581525 TMEM39BQ9GZU3 492 aa15.42■□□□□ 0.06
SNORD55-201ENST00000581525 APBB1O00213 710 aa15.41■□□□□ 0.06
SNORD55-201ENST00000581525 WDHD1O75717 1129 aaPredicted RBP15.41■□□□□ 0.06
SNORD55-201ENST00000581525 BTDP43251 543 aa15.41■□□□□ 0.06
SNORD55-201ENST00000581525 CACNB3P54284 484 aa15.41■□□□□ 0.06
SNORD55-201ENST00000581525 NFIAQ12857 509 aa15.41■□□□□ 0.06
SNORD55-201ENST00000581525 TTF1Q15361 905 aaPredicted RBP15.41■□□□□ 0.06
SNORD55-201ENST00000581525 CDAN1Q8IWY9 1227 aa15.41■□□□□ 0.06
SNORD55-201ENST00000581525 EXOC6Q8TAG9 804 aa15.41■□□□□ 0.06
SNORD55-201ENST00000581525 GCC1Q96CN9 775 aa15.41■□□□□ 0.06
SNORD55-201ENST00000581525 ANTXR1Q9H6X2 564 aa15.41■□□□□ 0.06
SNORD55-201ENST00000581525 RAI14Q9P0K7 980 aa15.41■□□□□ 0.06
SNORD55-201ENST00000581525 SMARCA5O60264 1052 aaPredicted RBP15.4■□□□□ 0.06
SNORD55-201ENST00000581525 ZNF157P51786 506 aaPredicted RBP15.4■□□□□ 0.06
SNORD55-201ENST00000581525 MAP2K1Q02750 393 aaPredicted RBP15.4■□□□□ 0.06
SNORD55-201ENST00000581525 NAA16Q6N069 864 aaPredicted RBP15.4■□□□□ 0.06
SNORD55-201ENST00000581525 RASAL3Q86YV0 1011 aa15.4■□□□□ 0.06
SNORD55-201ENST00000581525 HOOK2Q96ED9 719 aa15.4■□□□□ 0.06
SNORD55-201ENST00000581525 HAUS7Q99871 368 aa15.4■□□□□ 0.06
SNORD55-201ENST00000581525 ZNF112Q9UJU3 913 aa15.4■□□□□ 0.06
SNORD55-201ENST00000581525 MYH2Q9UKX2 1941 aa15.39■□□□□ 0.05
SNORD55-201ENST00000581525 AOC2O75106 756 aa15.39■□□□□ 0.05
SNORD55-201ENST00000581525 SMC5Q8IY18 1101 aa15.39■□□□□ 0.05
SNORD55-201ENST00000581525 REM2Q8IYK8 340 aaPredicted RBP15.39■□□□□ 0.05
SNORD55-201ENST00000581525 DDX4Q9NQI0 724 aaKnown RBP15.39■□□□□ 0.05
SNORD55-201ENST00000581525 ANGEL1Q9UNK9 670 aaKnown RBP15.39■□□□□ 0.05
SNORD55-201ENST00000581525 SALL3Q9BXA9 1300 aa15.39■□□□□ 0.05
SNORD55-201ENST00000581525 ATRNL1Q5VV63 1379 aa15.38■□□□□ 0.05
SNORD55-201ENST00000581525 IREB2P48200 963 aaKnown RBP15.38■□□□□ 0.05
SNORD55-201ENST00000581525 RGS3P49796 1198 aa15.38■□□□□ 0.05
SNORD55-201ENST00000581525 MAP3K12Q12852 859 aa15.38■□□□□ 0.05
SNORD55-201ENST00000581525 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.38■□□□□ 0.05
SNORD55-201ENST00000581525 SH3BP5LQ7L8J4 393 aa15.38■□□□□ 0.05
SNORD55-201ENST00000581525 ADGRA1Q86SQ6 560 aa15.38■□□□□ 0.05
SNORD55-201ENST00000581525 CERS3Q8IU89 383 aa15.38■□□□□ 0.05
SNORD55-201ENST00000581525 ZFPM1Q8IX07 1006 aa15.38■□□□□ 0.05
SNORD55-201ENST00000581525 ANKRD13AQ8IZ07 590 aa15.38■□□□□ 0.05
SNORD55-201ENST00000581525 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNORD55-201ENST00000581525 ZIC5Q96T25 663 aa15.38■□□□□ 0.05
SNORD55-201ENST00000581525 ECHDC1Q9NTX5 307 aa15.38■□□□□ 0.05
SNORD55-201ENST00000581525 NDUFB9Q9Y6M9 179 aa15.38■□□□□ 0.05
SNORD55-201ENST00000581525 COL2A1P02458 1487 aaPredicted RBP15.38■□□□□ 0.05
SNORD55-201ENST00000581525 TBC1D12O60347 775 aa15.37■□□□□ 0.05
SNORD55-201ENST00000581525 BAG3O95817 575 aa15.37■□□□□ 0.05
SNORD55-201ENST00000581525 PLCG2P16885 1265 aa15.37■□□□□ 0.05
SNORD55-201ENST00000581525 RWDD1Q9H446 243 aaPredicted RBP15.37■□□□□ 0.05
SNORD55-201ENST00000581525 FZD1Q9UP38 647 aa15.37■□□□□ 0.05
SNORD55-201ENST00000581525 TCRBV5S4A2TA0A5A2 114 aa15.36■□□□□ 0.05
SNORD55-201ENST00000581525 HSPA1AP0DMV8 641 aaKnown RBP15.36■□□□□ 0.05
SNORD55-201ENST00000581525 HSPA1BP0DMV9 641 aaKnown RBP15.36■□□□□ 0.05
SNORD55-201ENST00000581525 TM4SF4P48230 202 aa15.36■□□□□ 0.05
SNORD55-201ENST00000581525 MAP3K9P80192 1104 aa15.36■□□□□ 0.05
SNORD55-201ENST00000581525 KIF23Q02241 960 aaPredicted RBP15.36■□□□□ 0.05
SNORD55-201ENST00000581525 TTLL12Q14166 644 aaPredicted RBP15.36■□□□□ 0.05
SNORD55-201ENST00000581525 SPRYD7Q5W111 196 aa15.36■□□□□ 0.05
SNORD55-201ENST00000581525 METTL16Q86W50 562 aaKnown RBP15.36■□□□□ 0.05
SNORD55-201ENST00000581525 SLC10A4Q96EP9 437 aa15.36■□□□□ 0.05
SNORD55-201ENST00000581525 CSRNP1Q96S65 589 aa15.36■□□□□ 0.05
SNORD55-201ENST00000581525 BOLA2Q9H3K6 86 aa15.36■□□□□ 0.05
SNORD55-201ENST00000581525 PAG1Q9NWQ8 432 aa15.36■□□□□ 0.05
SNORD55-201ENST00000581525 TTC41PQ6P2S7 1318 aa15.36■□□□□ 0.05
SNORD55-201ENST00000581525 DDTLA6NHG4 134 aaPredicted RBP15.35■□□□□ 0.05
SNORD55-201ENST00000581525 IDH1O75874 414 aaKnown RBP15.35■□□□□ 0.05
SNORD55-201ENST00000581525 IGHDP01880 384 aa15.35■□□□□ 0.05
SNORD55-201ENST00000581525 ZBTB48P10074 688 aaPredicted RBP15.35■□□□□ 0.05
SNORD55-201ENST00000581525 CYP7A1P22680 504 aa15.35■□□□□ 0.05
SNORD55-201ENST00000581525 TCP10Q12799 353 aa15.35■□□□□ 0.05
SNORD55-201ENST00000581525 PRKG1Q13976 671 aa15.35■□□□□ 0.05
SNORD55-201ENST00000581525 DCAF15Q66K64 600 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms