RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 CDC42EP5Q6NZY7 148 aa17.69■□□□□ 0.42
MKS1-207ENST00000578789 MOB2Q70IA6 237 aa17.69■□□□□ 0.42
MKS1-207ENST00000578789 NSUN4Q96CB9 384 aaKnown RBP17.69■□□□□ 0.42
MKS1-207ENST00000578789 SNRKQ9NRH2 765 aa17.69■□□□□ 0.42
MKS1-207ENST00000578789 IFIT2P09913 472 aaKnown RBP17.68■□□□□ 0.42
MKS1-207ENST00000578789 ZAP70P43403 619 aa17.68■□□□□ 0.42
MKS1-207ENST00000578789 CACNB3P54284 484 aa17.68■□□□□ 0.42
MKS1-207ENST00000578789 GSTO1P78417 241 aa17.68■□□□□ 0.42
MKS1-207ENST00000578789 NBPF12Q5TAG4 269 aaPredicted RBP17.68■□□□□ 0.42
MKS1-207ENST00000578789 PPP4R3CPQ6ZMV5 832 aa17.68■□□□□ 0.42
MKS1-207ENST00000578789 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.68■□□□□ 0.42
MKS1-207ENST00000578789 LRRCC1Q9C099 1032 aa17.68■□□□□ 0.42
MKS1-207ENST00000578789 TMEM39BQ9GZU3 492 aa17.68■□□□□ 0.42
MKS1-207ENST00000578789 LAMB1P07942 1786 aa17.67■□□□□ 0.42
MKS1-207ENST00000578789 FAM155AB1AL88 458 aaPredicted RBP17.67■□□□□ 0.42
MKS1-207ENST00000578789 SLC10A3P09131 477 aa17.67■□□□□ 0.42
MKS1-207ENST00000578789 MAP2K2P36507 400 aa17.67■□□□□ 0.42
MKS1-207ENST00000578789 ARMC9Q7Z3E5 817 aa17.67■□□□□ 0.42
MKS1-207ENST00000578789 CCDC102AQ96A19 550 aa17.67■□□□□ 0.42
MKS1-207ENST00000578789 RAI14Q9P0K7 980 aa17.67■□□□□ 0.42
MKS1-207ENST00000578789 LRP2BPQ9P2M1 347 aa17.67■□□□□ 0.42
MKS1-207ENST00000578789 GPR75-ASB3A0A0A6YYF3 556 aa17.66■□□□□ 0.42
MKS1-207ENST00000578789 UBE2Q2LH0YL09 131 aa17.66■□□□□ 0.42
MKS1-207ENST00000578789 HSPA1AP0DMV8 641 aaKnown RBP17.66■□□□□ 0.42
MKS1-207ENST00000578789 HSPA1BP0DMV9 641 aaKnown RBP17.66■□□□□ 0.42
MKS1-207ENST00000578789 BTDP43251 543 aa17.66■□□□□ 0.42
MKS1-207ENST00000578789 ZNF157P51786 506 aaPredicted RBP17.66■□□□□ 0.42
MKS1-207ENST00000578789 NOGQ13253 232 aa17.66■□□□□ 0.42
MKS1-207ENST00000578789 TTLL12Q14166 644 aaPredicted RBP17.66■□□□□ 0.42
MKS1-207ENST00000578789 LDLRAD1Q5T700 205 aa17.66■□□□□ 0.42
MKS1-207ENST00000578789 RASAL3Q86YV0 1011 aa17.66■□□□□ 0.42
MKS1-207ENST00000578789 CDAN1Q8IWY9 1227 aa17.66■□□□□ 0.42
MKS1-207ENST00000578789 PIH1D3Q9NQM4 214 aaKnown RBP17.66■□□□□ 0.42
MKS1-207ENST00000578789 USP40Q9NVE5 1235 aa17.66■□□□□ 0.42
MKS1-207ENST00000578789 UNCXA6NJT0 531 aa17.65■□□□□ 0.42
MKS1-207ENST00000578789 PPP1R12BO60237 982 aaPredicted RBP17.65■□□□□ 0.42
MKS1-207ENST00000578789 AOC2O75106 756 aa17.65■□□□□ 0.42
MKS1-207ENST00000578789 LDHCP07864 332 aa17.65■□□□□ 0.42
MKS1-207ENST00000578789 NFIAQ12857 509 aa17.65■□□□□ 0.42
MKS1-207ENST00000578789 GRM1Q13255 1194 aa17.65■□□□□ 0.42
MKS1-207ENST00000578789 FAM151AQ8WW52 585 aa17.65■□□□□ 0.42
MKS1-207ENST00000578789 IDI2Q9BXS1 227 aa17.65■□□□□ 0.42
MKS1-207ENST00000578789 ANGEL1Q9UNK9 670 aaKnown RBP17.65■□□□□ 0.42
MKS1-207ENST00000578789 FOCADQ5VW36 1801 aa17.64■□□□□ 0.41
MKS1-207ENST00000578789 SMARCA5O60264 1052 aaPredicted RBP17.64■□□□□ 0.41
MKS1-207ENST00000578789 MAP4K4O95819 1239 aaPredicted RBP17.64■□□□□ 0.41
MKS1-207ENST00000578789 RHBDL3P58872 404 aa17.64■□□□□ 0.41
MKS1-207ENST00000578789 MAP2K1Q02750 393 aaPredicted RBP17.64■□□□□ 0.41
MKS1-207ENST00000578789 PRKG1Q13976 671 aa17.64■□□□□ 0.41
MKS1-207ENST00000578789 NAA16Q6N069 864 aaPredicted RBP17.64■□□□□ 0.41
MKS1-207ENST00000578789 WBP1LQ9NX94 342 aa17.64■□□□□ 0.41
MKS1-207ENST00000578789 FAM198AQ9UFP1 575 aa17.64■□□□□ 0.41
MKS1-207ENST00000578789 FZD1Q9UP38 647 aa17.64■□□□□ 0.41
MKS1-207ENST00000578789 SUPT16HQ9Y5B9 1047 aaKnown RBP17.64■□□□□ 0.41
MKS1-207ENST00000578789 CDK5RAP2Q96SN8 1893 aa17.64■□□□□ 0.41
MKS1-207ENST00000578789 HDAC1Q13547 482 aaPredicted RBP17.63■□□□□ 0.41
MKS1-207ENST00000578789 TMED8Q6PL24 325 aaPredicted RBP17.63■□□□□ 0.41
MKS1-207ENST00000578789 NDUFB9Q9Y6M9 179 aa17.63■□□□□ 0.41
MKS1-207ENST00000578789 ENTPD3O75355 529 aa17.62■□□□□ 0.41
MKS1-207ENST00000578789 USP2O75604 605 aaPredicted RBP17.62■□□□□ 0.41
MKS1-207ENST00000578789 NPM3O75607 178 aaKnown RBP17.62■□□□□ 0.41
MKS1-207ENST00000578789 WDHD1O75717 1129 aaPredicted RBP17.62■□□□□ 0.41
MKS1-207ENST00000578789 ATP5JP18859 108 aa17.62■□□□□ 0.41
MKS1-207ENST00000578789 IREB2P48200 963 aaKnown RBP17.62■□□□□ 0.41
MKS1-207ENST00000578789 HOOK2Q96ED9 719 aa17.62■□□□□ 0.41
MKS1-207ENST00000578789 ANTXR1Q9H6X2 564 aa17.62■□□□□ 0.41
MKS1-207ENST00000578789 COL2A1P02458 1487 aaPredicted RBP17.62■□□□□ 0.41
MKS1-207ENST00000578789 AK9Q5TCS8 1911 aa17.61■□□□□ 0.41
MKS1-207ENST00000578789 RGS3P49796 1198 aa17.61■□□□□ 0.41
MKS1-207ENST00000578789 TTF1Q15361 905 aaPredicted RBP17.61■□□□□ 0.41
MKS1-207ENST00000578789 ADGRA1Q86SQ6 560 aa17.61■□□□□ 0.41
MKS1-207ENST00000578789 EXOC6Q8TAG9 804 aa17.61■□□□□ 0.41
MKS1-207ENST00000578789 ZIC5Q96T25 663 aa17.61■□□□□ 0.41
MKS1-207ENST00000578789 MYH7P12883 1935 aa17.6■□□□□ 0.41
MKS1-207ENST00000578789 IDH1O75874 414 aaKnown RBP17.6■□□□□ 0.41
MKS1-207ENST00000578789 PPP4CP60510 307 aa17.6■□□□□ 0.41
MKS1-207ENST00000578789 TCP10Q12799 353 aa17.6■□□□□ 0.41
MKS1-207ENST00000578789 ANKRD13AQ8IZ07 590 aa17.6■□□□□ 0.41
MKS1-207ENST00000578789 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.6■□□□□ 0.41
MKS1-207ENST00000578789 DDX4Q9NQI0 724 aaKnown RBP17.6■□□□□ 0.41
MKS1-207ENST00000578789 ATRNL1Q5VV63 1379 aa17.6■□□□□ 0.41
MKS1-207ENST00000578789 BAG3O95817 575 aa17.59■□□□□ 0.41
MKS1-207ENST00000578789 PLCG2P16885 1265 aa17.59■□□□□ 0.41
MKS1-207ENST00000578789 KIF23Q02241 960 aaPredicted RBP17.59■□□□□ 0.41
MKS1-207ENST00000578789 MAP3K12Q12852 859 aa17.59■□□□□ 0.41
MKS1-207ENST00000578789 DCAF15Q66K64 600 aa17.59■□□□□ 0.41
MKS1-207ENST00000578789 ZFPM1Q8IX07 1006 aa17.59■□□□□ 0.41
MKS1-207ENST00000578789 AIDAQ96BJ3 306 aa17.59■□□□□ 0.41
MKS1-207ENST00000578789 GCC1Q96CN9 775 aa17.59■□□□□ 0.41
MKS1-207ENST00000578789 HAUS7Q99871 368 aa17.59■□□□□ 0.41
MKS1-207ENST00000578789 NOL10Q9BSC4 688 aaKnown RBP17.59■□□□□ 0.41
MKS1-207ENST00000578789 FOXN1O15353 648 aa17.58■□□□□ 0.4
MKS1-207ENST00000578789 CYP7A1P22680 504 aa17.58■□□□□ 0.4
MKS1-207ENST00000578789 SH3BP5LQ7L8J4 393 aa17.58■□□□□ 0.4
MKS1-207ENST00000578789 REM2Q8IYK8 340 aaPredicted RBP17.58■□□□□ 0.4
MKS1-207ENST00000578789 SH3RF3Q8TEJ3 882 aaPredicted RBP17.58■□□□□ 0.4
MKS1-207ENST00000578789 CLMNQ96JQ2 1002 aa17.58■□□□□ 0.4
MKS1-207ENST00000578789 DNAJC2Q99543 621 aaKnown RBP17.58■□□□□ 0.4
MKS1-207ENST00000578789 BCL11AQ9H165 835 aa17.58■□□□□ 0.4
MKS1-207ENST00000578789 BOLA2Q9H3K6 86 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms