RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 ANTXR1Q9H6X2 564 aa18.74■□□□□ 0.59
IFT20-206ENST00000578122 TDRD3Q9H7E2 651 aaKnown RBP18.74■□□□□ 0.59
IFT20-206ENST00000578122 ZNF70Q9UC06 446 aaPredicted RBP18.74■□□□□ 0.59
IFT20-206ENST00000578122 DOCK2Q92608 1830 aa18.74■□□□□ 0.59
IFT20-206ENST00000578122 PASKQ96RG2 1323 aa18.74■□□□□ 0.59
IFT20-206ENST00000578122 MAST2Q6P0Q8 1798 aa18.73■□□□□ 0.59
IFT20-206ENST00000578122 LDHCP07864 332 aa18.73■□□□□ 0.59
IFT20-206ENST00000578122 TTF1Q15361 905 aaPredicted RBP18.73■□□□□ 0.59
IFT20-206ENST00000578122 APOBEC3HQ6NTF7 200 aaKnown RBP18.73■□□□□ 0.59
IFT20-206ENST00000578122 CHD1LQ86WJ1 897 aa18.73■□□□□ 0.59
IFT20-206ENST00000578122 ZNF384Q8TF68 577 aa18.73■□□□□ 0.59
IFT20-206ENST00000578122 NSUN4Q96CB9 384 aaKnown RBP18.73■□□□□ 0.59
IFT20-206ENST00000578122 TTC41PQ6P2S7 1318 aa18.73■□□□□ 0.59
IFT20-206ENST00000578122 GOLIM4O00461 696 aa18.72■□□□□ 0.59
IFT20-206ENST00000578122 IGSF3O75054 1194 aa18.72■□□□□ 0.59
IFT20-206ENST00000578122 IDH1O75874 414 aaKnown RBP18.72■□□□□ 0.59
IFT20-206ENST00000578122 MX1P20591 662 aa18.72■□□□□ 0.59
IFT20-206ENST00000578122 FMR1Q06787 632 aaKnown RBP eCLIP18.72■□□□□ 0.59
IFT20-206ENST00000578122 TSHZ3Q63HK5 1081 aa18.72■□□□□ 0.59
IFT20-206ENST00000578122 FAM163AQ96GL9 167 aaPredicted RBP18.72■□□□□ 0.59
IFT20-206ENST00000578122 VEZTQ9HBM0 779 aa18.72■□□□□ 0.59
IFT20-206ENST00000578122 SCAF8Q9UPN6 1271 aaKnown RBP18.72■□□□□ 0.59
IFT20-206ENST00000578122 MROH7-TTC4A0A0A0MT08 1334 aa18.72■□□□□ 0.59
IFT20-206ENST00000578122 GAKO14976 1311 aa18.72■□□□□ 0.59
IFT20-206ENST00000578122 ERC2O15083 957 aa18.71■□□□□ 0.59
IFT20-206ENST00000578122 HSPA6P17066 643 aa18.71■□□□□ 0.59
IFT20-206ENST00000578122 NAA16Q6N069 864 aaPredicted RBP18.71■□□□□ 0.59
IFT20-206ENST00000578122 DLK2Q6UY11 383 aa18.71■□□□□ 0.59
IFT20-206ENST00000578122 EDC3Q96F86 508 aaKnown RBP18.71■□□□□ 0.59
IFT20-206ENST00000578122 PAG1Q9NWQ8 432 aa18.71■□□□□ 0.59
IFT20-206ENST00000578122 SALL3Q9BXA9 1300 aa18.71■□□□□ 0.59
IFT20-206ENST00000578122 APLP1P51693 650 aa18.7■□□□□ 0.58
IFT20-206ENST00000578122 MAP3K12Q12852 859 aa18.7■□□□□ 0.58
IFT20-206ENST00000578122 TMOD2Q9NZR1 351 aa18.7■□□□□ 0.58
IFT20-206ENST00000578122 MYH7P12883 1935 aa18.7■□□□□ 0.58
IFT20-206ENST00000578122 GPR75-ASB3A0A0A6YYF3 556 aa18.69■□□□□ 0.58
IFT20-206ENST00000578122 GLRX3O76003 335 aaKnown RBP18.69■□□□□ 0.58
IFT20-206ENST00000578122 CDC42EP5Q6NZY7 148 aa18.69■□□□□ 0.58
IFT20-206ENST00000578122 PI4K2BQ8TCG2 481 aa18.69■□□□□ 0.58
IFT20-206ENST00000578122 USP40Q9NVE5 1235 aa18.69■□□□□ 0.58
IFT20-206ENST00000578122 STAP2Q9UGK3 403 aa18.69■□□□□ 0.58
IFT20-206ENST00000578122 TCP10L2B9ZVM9 353 aa18.68■□□□□ 0.58
IFT20-206ENST00000578122 CYP7A1P22680 504 aa18.68■□□□□ 0.58
IFT20-206ENST00000578122 BTDP43251 543 aa18.68■□□□□ 0.58
IFT20-206ENST00000578122 PDE1AP54750 535 aa18.68■□□□□ 0.58
IFT20-206ENST00000578122 TNFAIP1Q13829 316 aa18.68■□□□□ 0.58
IFT20-206ENST00000578122 MAGEB6Q8N7X4 407 aa18.68■□□□□ 0.58
IFT20-206ENST00000578122 CDCA5Q96FF9 252 aa18.68■□□□□ 0.58
IFT20-206ENST00000578122 DEFB129Q9H1M3 183 aa18.68■□□□□ 0.58
IFT20-206ENST00000578122 ZNF408Q9H9D4 720 aa18.68■□□□□ 0.58
IFT20-206ENST00000578122 FARP1Q9Y4F1 1045 aaPredicted RBP18.68■□□□□ 0.58
IFT20-206ENST00000578122 CELF2O95319 508 aaKnown RBP18.67■□□□□ 0.58
IFT20-206ENST00000578122 CACNB3P54284 484 aa18.67■□□□□ 0.58
IFT20-206ENST00000578122 FKBP1CQ5VVH2 108 aa18.67■□□□□ 0.58
IFT20-206ENST00000578122 PRAMEF18Q5VWM3 479 aa18.67■□□□□ 0.58
IFT20-206ENST00000578122 NOL10Q9BSC4 688 aaKnown RBP18.67■□□□□ 0.58
IFT20-206ENST00000578122 PPP2R3BQ9Y5P8 575 aa18.67■□□□□ 0.58
IFT20-206ENST00000578122 TMEM88BA6NKF7 163 aa18.66■□□□□ 0.58
IFT20-206ENST00000578122 PDE6AP16499 860 aa18.66■□□□□ 0.58
IFT20-206ENST00000578122 TNNI2P48788 182 aa18.66■□□□□ 0.58
IFT20-206ENST00000578122 RASA3Q14644 834 aa18.66■□□□□ 0.58
IFT20-206ENST00000578122 SLC9C2Q5TAH2 1124 aa18.66■□□□□ 0.58
IFT20-206ENST00000578122 CST9Q5W186 159 aa18.66■□□□□ 0.58
IFT20-206ENST00000578122 TMED8Q6PL24 325 aaPredicted RBP18.66■□□□□ 0.58
IFT20-206ENST00000578122 AK9Q5TCS8 1911 aa18.66■□□□□ 0.58
IFT20-206ENST00000578122 BAG3O95817 575 aa18.65■□□□□ 0.58
IFT20-206ENST00000578122 MAP4K4O95819 1239 aaPredicted RBP18.65■□□□□ 0.58
IFT20-206ENST00000578122 ADGRA1Q86SQ6 560 aa18.65■□□□□ 0.58
IFT20-206ENST00000578122 PLEKHM2Q8IWE5 1019 aa18.65■□□□□ 0.58
IFT20-206ENST00000578122 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.65■□□□□ 0.58
IFT20-206ENST00000578122 CREBZFQ9NS37 354 aa18.65■□□□□ 0.58
IFT20-206ENST00000578122 RHBDL3P58872 404 aa18.64■□□□□ 0.57
IFT20-206ENST00000578122 PPP4CP60510 307 aa18.64■□□□□ 0.57
IFT20-206ENST00000578122 CENPQQ7L2Z9 268 aaPredicted RBP18.64■□□□□ 0.57
IFT20-206ENST00000578122 FAM83AQ86UY5 434 aa18.64■□□□□ 0.57
IFT20-206ENST00000578122 KBTBD3Q8NAB2 608 aa18.64■□□□□ 0.57
IFT20-206ENST00000578122 CCDC136Q96JN2 1154 aa18.64■□□□□ 0.57
IFT20-206ENST00000578122 AATFQ9NY61 560 aaKnown RBP eCLIP18.64■□□□□ 0.57
IFT20-206ENST00000578122 CNTNAP1P78357 1384 aa18.64■□□□□ 0.57
IFT20-206ENST00000578122 CDK5RAP2Q96SN8 1893 aa18.63■□□□□ 0.57
IFT20-206ENST00000578122 PLCG2P16885 1265 aa18.63■□□□□ 0.57
IFT20-206ENST00000578122 NF2P35240 595 aa18.63■□□□□ 0.57
IFT20-206ENST00000578122 NFIAQ12857 509 aa18.63■□□□□ 0.57
IFT20-206ENST00000578122 ERICH6BQ5W0A0 696 aa18.63■□□□□ 0.57
IFT20-206ENST00000578122 ZSCAN25Q6NSZ9 544 aa18.63■□□□□ 0.57
IFT20-206ENST00000578122 TMEM39BQ9GZU3 492 aa18.63■□□□□ 0.57
IFT20-206ENST00000578122 ZNF532Q9HCE3 1301 aa18.63■□□□□ 0.57
IFT20-206ENST00000578122 TCRBV5S4A2TA0A5A2 114 aa18.62■□□□□ 0.57
IFT20-206ENST00000578122 WDHD1O75717 1129 aaPredicted RBP18.62■□□□□ 0.57
IFT20-206ENST00000578122 PDE4AP27815 886 aa18.62■□□□□ 0.57
IFT20-206ENST00000578122 ADD2P35612 726 aa18.62■□□□□ 0.57
IFT20-206ENST00000578122 DYNLL1P63167 89 aaKnown RBP18.62■□□□□ 0.57
IFT20-206ENST00000578122 HTRA3P83110 453 aa18.62■□□□□ 0.57
IFT20-206ENST00000578122 TCP10Q12799 353 aa18.62■□□□□ 0.57
IFT20-206ENST00000578122 SUPT20HL1Q3ZLR7 823 aa18.62■□□□□ 0.57
IFT20-206ENST00000578122 NBPF12Q5TAG4 269 aaPredicted RBP18.62■□□□□ 0.57
IFT20-206ENST00000578122 TEX11Q8IYF3 940 aa18.62■□□□□ 0.57
IFT20-206ENST00000578122 MIGA1Q8NAN2 632 aa18.62■□□□□ 0.57
IFT20-206ENST00000578122 SH3RF3Q8TEJ3 882 aaPredicted RBP18.62■□□□□ 0.57
IFT20-206ENST00000578122 FAM151AQ8WW52 585 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms