RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 CHGBP05060 677 aa17.09■□□□□ 0.33
AC009163.3-201ENST00000563554 MAP3K12Q12852 859 aa17.09■□□□□ 0.33
AC009163.3-201ENST00000563554 NAA16Q6N069 864 aaPredicted RBP17.09■□□□□ 0.33
AC009163.3-201ENST00000563554 DCPSQ96C86 337 aaKnown RBP17.09■□□□□ 0.33
AC009163.3-201ENST00000563554 ZBED3Q96IU2 234 aaPredicted RBP17.09■□□□□ 0.33
AC009163.3-201ENST00000563554 PRMT6Q96LA8 375 aaPredicted RBP17.09■□□□□ 0.33
AC009163.3-201ENST00000563554 ZDHHC15Q96MV8 337 aa17.09■□□□□ 0.33
AC009163.3-201ENST00000563554 PITPNM2Q9BZ72 1349 aa17.09■□□□□ 0.33
AC009163.3-201ENST00000563554 PAPPA2Q9BXP8 1791 aa17.09■□□□□ 0.33
AC009163.3-201ENST00000563554 GAKO14976 1311 aa17.08■□□□□ 0.32
AC009163.3-201ENST00000563554 CLRN2A0PK11 232 aa17.08■□□□□ 0.32
AC009163.3-201ENST00000563554 MAP4K4O95819 1239 aaPredicted RBP17.08■□□□□ 0.32
AC009163.3-201ENST00000563554 MRIQ9BWK5 157 aa17.08■□□□□ 0.32
AC009163.3-201ENST00000563554 TDRD3Q9H7E2 651 aaKnown RBP17.08■□□□□ 0.32
AC009163.3-201ENST00000563554 VEZTQ9HBM0 779 aa17.08■□□□□ 0.32
AC009163.3-201ENST00000563554 IGSF3O75054 1194 aa17.07■□□□□ 0.32
AC009163.3-201ENST00000563554 LDHCP07864 332 aa17.07■□□□□ 0.32
AC009163.3-201ENST00000563554 BTDP43251 543 aa17.07■□□□□ 0.32
AC009163.3-201ENST00000563554 APOBEC3FQ8IUX4 373 aaKnown RBP17.07■□□□□ 0.32
AC009163.3-201ENST00000563554 MAGEB6Q8N7X4 407 aa17.07■□□□□ 0.32
AC009163.3-201ENST00000563554 NOL10Q9BSC4 688 aaKnown RBP17.07■□□□□ 0.32
AC009163.3-201ENST00000563554 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.07■□□□□ 0.32
AC009163.3-201ENST00000563554 TMOD2Q9NZR1 351 aa17.07■□□□□ 0.32
AC009163.3-201ENST00000563554 LAMA4Q16363 1823 aa17.07■□□□□ 0.32
AC009163.3-201ENST00000563554 FSTL1Q12841 308 aa17.06■□□□□ 0.32
AC009163.3-201ENST00000563554 SPDYE2Q495Y8 402 aa17.06■□□□□ 0.32
AC009163.3-201ENST00000563554 KRT26Q7Z3Y9 468 aa17.06■□□□□ 0.32
AC009163.3-201ENST00000563554 SULF1Q8IWU6 871 aa17.06■□□□□ 0.32
AC009163.3-201ENST00000563554 CNTROBQ8N137 903 aa17.06■□□□□ 0.32
AC009163.3-201ENST00000563554 GLIS2Q9BZE0 524 aaPredicted RBP17.06■□□□□ 0.32
AC009163.3-201ENST00000563554 ZNF70Q9UC06 446 aaPredicted RBP17.06■□□□□ 0.32
AC009163.3-201ENST00000563554 PGAP2Q9UHJ9 254 aa17.06■□□□□ 0.32
AC009163.3-201ENST00000563554 DOCK1Q14185 1865 aa17.05■□□□□ 0.32
AC009163.3-201ENST00000563554 ADM5C9JUS6 153 aa17.05■□□□□ 0.32
AC009163.3-201ENST00000563554 CYP7A1P22680 504 aa17.05■□□□□ 0.32
AC009163.3-201ENST00000563554 SLFNL1Q499Z3 407 aa17.05■□□□□ 0.32
AC009163.3-201ENST00000563554 APOBEC3HQ6NTF7 200 aaKnown RBP17.05■□□□□ 0.32
AC009163.3-201ENST00000563554 CDC37L1Q7L3B6 337 aa17.05■□□□□ 0.32
AC009163.3-201ENST00000563554 FSD1Q9BTV5 496 aa17.05■□□□□ 0.32
AC009163.3-201ENST00000563554 OSBPL3Q9H4L5 887 aa17.05■□□□□ 0.32
AC009163.3-201ENST00000563554 SCAF8Q9UPN6 1271 aaKnown RBP17.05■□□□□ 0.32
AC009163.3-201ENST00000563554 GSPT1P15170 499 aaKnown RBP17.04■□□□□ 0.32
AC009163.3-201ENST00000563554 PDE6AP16499 860 aa17.04■□□□□ 0.32
AC009163.3-201ENST00000563554 TNFAIP1Q13829 316 aa17.04■□□□□ 0.32
AC009163.3-201ENST00000563554 SLC9C2Q5TAH2 1124 aa17.04■□□□□ 0.32
AC009163.3-201ENST00000563554 ZSCAN25Q6NSZ9 544 aa17.04■□□□□ 0.32
AC009163.3-201ENST00000563554 ADGRA1Q86SQ6 560 aa17.04■□□□□ 0.32
AC009163.3-201ENST00000563554 KBTBD3Q8NAB2 608 aa17.04■□□□□ 0.32
AC009163.3-201ENST00000563554 FAM163AQ96GL9 167 aaPredicted RBP17.04■□□□□ 0.32
AC009163.3-201ENST00000563554 RFX7Q2KHR2 1363 aa17.03■□□□□ 0.32
AC009163.3-201ENST00000563554 ZNF532Q9HCE3 1301 aa17.03■□□□□ 0.32
AC009163.3-201ENST00000563554 GPR75-ASB3A0A0A6YYF3 556 aa17.03■□□□□ 0.32
AC009163.3-201ENST00000563554 ADD2P35612 726 aa17.03■□□□□ 0.32
AC009163.3-201ENST00000563554 CACNB3P54284 484 aa17.03■□□□□ 0.32
AC009163.3-201ENST00000563554 CDC42EP5Q6NZY7 148 aa17.03■□□□□ 0.32
AC009163.3-201ENST00000563554 TMED8Q6PL24 325 aaPredicted RBP17.03■□□□□ 0.32
AC009163.3-201ENST00000563554 USP48Q86UV5 1035 aa17.03■□□□□ 0.32
AC009163.3-201ENST00000563554 USP40Q9NVE5 1235 aa17.03■□□□□ 0.32
AC009163.3-201ENST00000563554 AATFQ9NY61 560 aaKnown RBP eCLIP17.03■□□□□ 0.32
AC009163.3-201ENST00000563554 GTF3C3Q9Y5Q9 886 aa17.03■□□□□ 0.32
AC009163.3-201ENST00000563554 TRIM6-TRIM34B2RNG4 842 aa17.02■□□□□ 0.32
AC009163.3-201ENST00000563554 TCP10L2B9ZVM9 353 aa17.02■□□□□ 0.32
AC009163.3-201ENST00000563554 TRAF5O00463 557 aa17.02■□□□□ 0.32
AC009163.3-201ENST00000563554 BAG3O95817 575 aa17.02■□□□□ 0.32
AC009163.3-201ENST00000563554 TNNI2P48788 182 aa17.02■□□□□ 0.32
AC009163.3-201ENST00000563554 MIGA1Q8NAN2 632 aa17.02■□□□□ 0.32
AC009163.3-201ENST00000563554 PASKQ96RG2 1323 aa17.01■□□□□ 0.31
AC009163.3-201ENST00000563554 ITGBL1O95965 494 aaPredicted RBP17.01■□□□□ 0.31
AC009163.3-201ENST00000563554 PLCG2P16885 1265 aa17.01■□□□□ 0.31
AC009163.3-201ENST00000563554 LRRFIP1Q32MZ4 808 aaKnown RBP17.01■□□□□ 0.31
AC009163.3-201ENST00000563554 RILPL2Q969X0 211 aa17.01■□□□□ 0.31
AC009163.3-201ENST00000563554 EVI5LQ96CN4 794 aa17.01■□□□□ 0.31
AC009163.3-201ENST00000563554 CDCA5Q96FF9 252 aa17.01■□□□□ 0.31
AC009163.3-201ENST00000563554 ZNF408Q9H9D4 720 aa17.01■□□□□ 0.31
AC009163.3-201ENST00000563554 RPAP1Q9BWH6 1393 aaPredicted RBP17.01■□□□□ 0.31
AC009163.3-201ENST00000563554 TCRBV5S4A2TA0A5A2 114 aa17■□□□□ 0.31
AC009163.3-201ENST00000563554 SSC5DA1L4H1 1573 aa17■□□□□ 0.31
AC009163.3-201ENST00000563554 C1QTNF8P60827 252 aa17■□□□□ 0.31
AC009163.3-201ENST00000563554 TTC22Q5TAA0 569 aa17■□□□□ 0.31
AC009163.3-201ENST00000563554 TEX11Q8IYF3 940 aa17■□□□□ 0.31
AC009163.3-201ENST00000563554 SH3RF3Q8TEJ3 882 aaPredicted RBP17■□□□□ 0.31
AC009163.3-201ENST00000563554 PPP2R3BQ9Y5P8 575 aa17■□□□□ 0.31
AC009163.3-201ENST00000563554 CNTNAP1P78357 1384 aa17■□□□□ 0.31
AC009163.3-201ENST00000563554 PTPRFP10586 1907 aa17■□□□□ 0.31
AC009163.3-201ENST00000563554 PHIPQ8WWQ0 1821 aa16.99■□□□□ 0.31
AC009163.3-201ENST00000563554 MAGEB6P1A0A0J9YX57 407 aa16.99■□□□□ 0.31
AC009163.3-201ENST00000563554 ZFYP08048 801 aaPredicted RBP16.99■□□□□ 0.31
AC009163.3-201ENST00000563554 RGS3P49796 1198 aa16.99■□□□□ 0.31
AC009163.3-201ENST00000563554 RHBDL3P58872 404 aa16.99■□□□□ 0.31
AC009163.3-201ENST00000563554 DYNLL1P63167 89 aaKnown RBP16.99■□□□□ 0.31
AC009163.3-201ENST00000563554 FMR1Q06787 632 aaKnown RBP eCLIP16.99■□□□□ 0.31
AC009163.3-201ENST00000563554 PICALMQ13492 652 aa16.99■□□□□ 0.31
AC009163.3-201ENST00000563554 UBE3CQ15386 1083 aa16.99■□□□□ 0.31
AC009163.3-201ENST00000563554 FKBP1CQ5VVH2 108 aa16.99■□□□□ 0.31
AC009163.3-201ENST00000563554 DLK2Q6UY11 383 aa16.99■□□□□ 0.31
AC009163.3-201ENST00000563554 CERS3Q8IU89 383 aa16.99■□□□□ 0.31
AC009163.3-201ENST00000563554 DEFB129Q9H1M3 183 aa16.99■□□□□ 0.31
AC009163.3-201ENST00000563554 COL2A1P02458 1487 aaPredicted RBP16.99■□□□□ 0.31
AC009163.3-201ENST00000563554 RNF113AO15541 343 aaKnown RBP16.98■□□□□ 0.31
AC009163.3-201ENST00000563554 TCP10Q12799 353 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms