RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 TDRD3Q9H7E2 651 aaKnown RBP15.31■□□□□ 0.04
SLIRP-211ENST00000557623 VEZTQ9HBM0 779 aa15.31■□□□□ 0.04
SLIRP-211ENST00000557623 TMOD2Q9NZR1 351 aa15.31■□□□□ 0.04
SLIRP-211ENST00000557623 ZNF70Q9UC06 446 aaPredicted RBP15.31■□□□□ 0.04
SLIRP-211ENST00000557623 ABCF2Q9UG63 623 aa15.31■□□□□ 0.04
SLIRP-211ENST00000557623 ECE1P42892 770 aa15.3■□□□□ 0.04
SLIRP-211ENST00000557623 MCAMP43121 646 aa15.3■□□□□ 0.04
SLIRP-211ENST00000557623 FKBP1BP68106 108 aa15.3■□□□□ 0.04
SLIRP-211ENST00000557623 AAMPQ13685 434 aa15.3■□□□□ 0.04
SLIRP-211ENST00000557623 MAST2Q6P0Q8 1798 aa15.3■□□□□ 0.04
SLIRP-211ENST00000557623 ERICH6Q7L0X2 663 aa15.3■□□□□ 0.04
SLIRP-211ENST00000557623 DZIP1Q86YF9 867 aaKnown RBP15.3■□□□□ 0.04
SLIRP-211ENST00000557623 JMYQ8N9B5 988 aa15.3■□□□□ 0.04
SLIRP-211ENST00000557623 DCBLD2Q96PD2 775 aa15.3■□□□□ 0.04
SLIRP-211ENST00000557623 DEFB129Q9H1M3 183 aa15.3■□□□□ 0.04
SLIRP-211ENST00000557623 IL1RAPL2Q9NP60 686 aa15.3■□□□□ 0.04
SLIRP-211ENST00000557623 DBNLQ9UJU6 430 aaKnown RBP15.3■□□□□ 0.04
SLIRP-211ENST00000557623 SCAF8Q9UPN6 1271 aaKnown RBP15.3■□□□□ 0.04
SLIRP-211ENST00000557623 MYO5AQ9Y4I1 1855 aaKnown RBP15.29■□□□□ 0.04
SLIRP-211ENST00000557623 APBB1O00213 710 aa15.29■□□□□ 0.04
SLIRP-211ENST00000557623 TNNI2P48788 182 aa15.29■□□□□ 0.04
SLIRP-211ENST00000557623 PAXIP1Q6ZW49 1069 aaPredicted RBP15.29■□□□□ 0.04
SLIRP-211ENST00000557623 AK9Q5TCS8 1911 aa15.28■□□□□ 0.04
SLIRP-211ENST00000557623 IGSF3O75054 1194 aa15.28■□□□□ 0.04
SLIRP-211ENST00000557623 IFIT2P09913 472 aaKnown RBP15.28■□□□□ 0.04
SLIRP-211ENST00000557623 HUNKP57058 714 aa15.28■□□□□ 0.04
SLIRP-211ENST00000557623 SUPT20HL1Q3ZLR7 823 aa15.28■□□□□ 0.04
SLIRP-211ENST00000557623 APOBEC3HQ6NTF7 200 aaKnown RBP15.28■□□□□ 0.04
SLIRP-211ENST00000557623 LRRCC1Q9C099 1032 aa15.28■□□□□ 0.04
SLIRP-211ENST00000557623 TLR7Q9NYK1 1049 aaKnown RBP15.28■□□□□ 0.04
SLIRP-211ENST00000557623 DAGLAQ9Y4D2 1042 aa15.28■□□□□ 0.04
SLIRP-211ENST00000557623 DOCK2Q92608 1830 aa15.27■□□□□ 0.04
SLIRP-211ENST00000557623 AOX1Q06278 1338 aa15.27■□□□□ 0.04
SLIRP-211ENST00000557623 WDR33Q9C0J8 1336 aaKnown RBP15.27■□□□□ 0.04
SLIRP-211ENST00000557623 LDHCP07864 332 aa15.27■□□□□ 0.04
SLIRP-211ENST00000557623 VEGFBP49765 207 aa15.27■□□□□ 0.04
SLIRP-211ENST00000557623 GSTO1P78417 241 aa15.27■□□□□ 0.04
SLIRP-211ENST00000557623 RASA3Q14644 834 aa15.27■□□□□ 0.04
SLIRP-211ENST00000557623 DIXDC1Q155Q3 683 aa15.27■□□□□ 0.04
SLIRP-211ENST00000557623 FKBP1CQ5VVH2 108 aa15.27■□□□□ 0.04
SLIRP-211ENST00000557623 PRAMEF18Q5VWM3 479 aa15.27■□□□□ 0.04
SLIRP-211ENST00000557623 PI16Q6UXB8 463 aa15.27■□□□□ 0.04
SLIRP-211ENST00000557623 ARMC9Q7Z3E5 817 aa15.27■□□□□ 0.04
SLIRP-211ENST00000557623 CAPNS2Q96L46 248 aa15.27■□□□□ 0.04
SLIRP-211ENST00000557623 DCTPP1Q9H773 170 aa15.27■□□□□ 0.04
SLIRP-211ENST00000557623 LRP2BPQ9P2M1 347 aa15.27■□□□□ 0.04
SLIRP-211ENST00000557623 SUPT16HQ9Y5B9 1047 aaKnown RBP15.27■□□□□ 0.04
SLIRP-211ENST00000557623 GAKO14976 1311 aa15.26■□□□□ 0.03
SLIRP-211ENST00000557623 THSD7BQ9C0I4 1608 aa15.26■□□□□ 0.03
SLIRP-211ENST00000557623 TCP10L2B9ZVM9 353 aa15.26■□□□□ 0.03
SLIRP-211ENST00000557623 TTLL12Q14166 644 aaPredicted RBP15.26■□□□□ 0.03
SLIRP-211ENST00000557623 TBC1D9Q6ZT07 1266 aa15.26■□□□□ 0.03
SLIRP-211ENST00000557623 FAM163AQ96GL9 167 aaPredicted RBP15.26■□□□□ 0.03
SLIRP-211ENST00000557623 SNRKQ9NRH2 765 aa15.26■□□□□ 0.03
SLIRP-211ENST00000557623 RAI14Q9P0K7 980 aa15.26■□□□□ 0.03
SLIRP-211ENST00000557623 PCDHB15Q9Y5E8 787 aa15.26■□□□□ 0.03
SLIRP-211ENST00000557623 MROH7-TTC4A0A0A0MT08 1334 aa15.25■□□□□ 0.03
SLIRP-211ENST00000557623 MECOMQ03112 1051 aa15.25■□□□□ 0.03
SLIRP-211ENST00000557623 CYP4F22Q6NT55 531 aa15.25■□□□□ 0.03
SLIRP-211ENST00000557623 RGMBQ6NW40 437 aa15.25■□□□□ 0.03
SLIRP-211ENST00000557623 ZNF467Q7Z7K2 595 aaPredicted RBP15.25■□□□□ 0.03
SLIRP-211ENST00000557623 FAM83AQ86UY5 434 aa15.25■□□□□ 0.03
SLIRP-211ENST00000557623 IFNL1Q8IU54 200 aa15.25■□□□□ 0.03
SLIRP-211ENST00000557623 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.25■□□□□ 0.03
SLIRP-211ENST00000557623 PPP1R12BO60237 982 aaPredicted RBP15.24■□□□□ 0.03
SLIRP-211ENST00000557623 CYP2E1P05181 493 aaPredicted RBP15.24■□□□□ 0.03
SLIRP-211ENST00000557623 ZAP70P43403 619 aa15.24■□□□□ 0.03
SLIRP-211ENST00000557623 CDC42EP5Q6NZY7 148 aa15.24■□□□□ 0.03
SLIRP-211ENST00000557623 CCDC102AQ96A19 550 aa15.24■□□□□ 0.03
SLIRP-211ENST00000557623 NSUN4Q96CB9 384 aaKnown RBP15.24■□□□□ 0.03
SLIRP-211ENST00000557623 BCL11AQ9H165 835 aa15.24■□□□□ 0.03
SLIRP-211ENST00000557623 USP40Q9NVE5 1235 aa15.24■□□□□ 0.03
SLIRP-211ENST00000557623 MAP4K4O95819 1239 aaPredicted RBP15.23■□□□□ 0.03
SLIRP-211ENST00000557623 MAP2K2P36507 400 aa15.23■□□□□ 0.03
SLIRP-211ENST00000557623 ZNF157P51786 506 aaPredicted RBP15.23■□□□□ 0.03
SLIRP-211ENST00000557623 GRM1Q13255 1194 aa15.23■□□□□ 0.03
SLIRP-211ENST00000557623 NBPF12Q5TAG4 269 aaPredicted RBP15.23■□□□□ 0.03
SLIRP-211ENST00000557623 HOOK2Q96ED9 719 aa15.23■□□□□ 0.03
SLIRP-211ENST00000557623 RPAP1Q9BWH6 1393 aaPredicted RBP15.23■□□□□ 0.03
SLIRP-211ENST00000557623 MYH7P12883 1935 aa15.22■□□□□ 0.03
SLIRP-211ENST00000557623 GPR75-ASB3A0A0A6YYF3 556 aa15.22■□□□□ 0.03
SLIRP-211ENST00000557623 ECM2O94769 699 aaPredicted RBP15.22■□□□□ 0.03
SLIRP-211ENST00000557623 BTDP43251 543 aa15.22■□□□□ 0.03
SLIRP-211ENST00000557623 CACNB3P54284 484 aa15.22■□□□□ 0.03
SLIRP-211ENST00000557623 NOGQ13253 232 aa15.22■□□□□ 0.03
SLIRP-211ENST00000557623 TTF1Q15361 905 aaPredicted RBP15.22■□□□□ 0.03
SLIRP-211ENST00000557623 MAP3K11Q16584 847 aa15.22■□□□□ 0.03
SLIRP-211ENST00000557623 NAA16Q6N069 864 aaPredicted RBP15.22■□□□□ 0.03
SLIRP-211ENST00000557623 TMED8Q6PL24 325 aaPredicted RBP15.22■□□□□ 0.03
SLIRP-211ENST00000557623 NOL10Q9BSC4 688 aaKnown RBP15.22■□□□□ 0.03
SLIRP-211ENST00000557623 TMEM39BQ9GZU3 492 aa15.22■□□□□ 0.03
SLIRP-211ENST00000557623 ANGEL1Q9UNK9 670 aaKnown RBP15.22■□□□□ 0.03
SLIRP-211ENST00000557623 CEP350Q5VT06 3117 aa15.21■□□□□ 0.03
SLIRP-211ENST00000557623 CDK5RAP2Q96SN8 1893 aa15.21■□□□□ 0.03
SLIRP-211ENST00000557623 SSC5DA1L4H1 1573 aa15.21■□□□□ 0.03
SLIRP-211ENST00000557623 UNCXA6NJT0 531 aa15.21■□□□□ 0.03
SLIRP-211ENST00000557623 UBE2Q2LH0YL09 131 aa15.21■□□□□ 0.03
SLIRP-211ENST00000557623 SMARCA5O60264 1052 aaPredicted RBP15.21■□□□□ 0.03
SLIRP-211ENST00000557623 IREB2P48200 963 aaKnown RBP15.21■□□□□ 0.03
SLIRP-211ENST00000557623 MAP2K1Q02750 393 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms