RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 DIXDC1Q155Q3 683 aa21.05■□□□□ 0.96
CLDND1-221ENST00000510541 CDC42EP5Q6NZY7 148 aa21.05■□□□□ 0.96
CLDND1-221ENST00000510541 COL2A1P02458 1487 aaPredicted RBP21.05■□□□□ 0.96
CLDND1-221ENST00000510541 TTC41PQ6P2S7 1318 aa21.04■□□□□ 0.96
CLDND1-221ENST00000510541 MAP2K2P36507 400 aa21.04■□□□□ 0.96
CLDND1-221ENST00000510541 LDLRAD1Q5T700 205 aa21.04■□□□□ 0.96
CLDND1-221ENST00000510541 TICAM2Q86XR7 235 aa21.04■□□□□ 0.96
CLDND1-221ENST00000510541 FAM151AQ8WW52 585 aa21.04■□□□□ 0.96
CLDND1-221ENST00000510541 CCDC102AQ96A19 550 aa21.04■□□□□ 0.96
CLDND1-221ENST00000510541 HAUS7Q99871 368 aa21.04■□□□□ 0.96
CLDND1-221ENST00000510541 ABT1Q9ULW3 272 aaKnown RBP21.04■□□□□ 0.96
CLDND1-221ENST00000510541 CLRN2A0PK11 232 aa21.03■□□□□ 0.96
CLDND1-221ENST00000510541 MAP3K12Q12852 859 aa21.03■□□□□ 0.96
CLDND1-221ENST00000510541 ARMC9Q7Z3E5 817 aa21.03■□□□□ 0.96
CLDND1-221ENST00000510541 EXOC6Q8TAG9 804 aa21.03■□□□□ 0.96
CLDND1-221ENST00000510541 GPATCH3Q96I76 525 aa21.03■□□□□ 0.96
CLDND1-221ENST00000510541 VEZTQ9HBM0 779 aa21.03■□□□□ 0.96
CLDND1-221ENST00000510541 ECHDC1Q9NTX5 307 aa21.03■□□□□ 0.96
CLDND1-221ENST00000510541 PPP1R12BO60237 982 aaPredicted RBP21.02■□□□□ 0.96
CLDND1-221ENST00000510541 HUNKP57058 714 aa21.02■□□□□ 0.96
CLDND1-221ENST00000510541 RHBDL3P58872 404 aa21.02■□□□□ 0.96
CLDND1-221ENST00000510541 NAA16Q6N069 864 aaPredicted RBP21.02■□□□□ 0.96
CLDND1-221ENST00000510541 TBC1D9Q6ZT07 1266 aa21.02■□□□□ 0.96
CLDND1-221ENST00000510541 REM2Q8IYK8 340 aaPredicted RBP21.02■□□□□ 0.96
CLDND1-221ENST00000510541 RAI14Q9P0K7 980 aa21.02■□□□□ 0.96
CLDND1-221ENST00000510541 BAG3O95817 575 aa21.01■□□□□ 0.95
CLDND1-221ENST00000510541 HTRA3P83110 453 aa21.01■□□□□ 0.95
CLDND1-221ENST00000510541 MAP3K10Q02779 954 aa21.01■□□□□ 0.95
CLDND1-221ENST00000510541 RGMBQ6NW40 437 aa21.01■□□□□ 0.95
CLDND1-221ENST00000510541 USP40Q9NVE5 1235 aa21.01■□□□□ 0.95
CLDND1-221ENST00000510541 SSC5DA1L4H1 1573 aa21.01■□□□□ 0.95
CLDND1-221ENST00000510541 SALL3Q9BXA9 1300 aa21.01■□□□□ 0.95
CLDND1-221ENST00000510541 ATRNL1Q5VV63 1379 aa21■□□□□ 0.95
CLDND1-221ENST00000510541 VEGFBP49765 207 aa21■□□□□ 0.95
CLDND1-221ENST00000510541 NOGQ13253 232 aa21■□□□□ 0.95
CLDND1-221ENST00000510541 PIH1D3Q9NQM4 214 aaKnown RBP21■□□□□ 0.95
CLDND1-221ENST00000510541 SNRKQ9NRH2 765 aa21■□□□□ 0.95
CLDND1-221ENST00000510541 WDR33Q9C0J8 1336 aaKnown RBP21■□□□□ 0.95
CLDND1-221ENST00000510541 APBB1O00213 710 aa20.99■□□□□ 0.95
CLDND1-221ENST00000510541 WDHD1O75717 1129 aaPredicted RBP20.99■□□□□ 0.95
CLDND1-221ENST00000510541 BTDP43251 543 aa20.99■□□□□ 0.95
CLDND1-221ENST00000510541 DLK2Q6UY11 383 aa20.99■□□□□ 0.95
CLDND1-221ENST00000510541 CAPNS2Q96L46 248 aa20.99■□□□□ 0.95
CLDND1-221ENST00000510541 ZNF408Q9H9D4 720 aa20.99■□□□□ 0.95
CLDND1-221ENST00000510541 FAM198AQ9UFP1 575 aa20.99■□□□□ 0.95
CLDND1-221ENST00000510541 STAP2Q9UGK3 403 aa20.99■□□□□ 0.95
CLDND1-221ENST00000510541 TCP10L2B9ZVM9 353 aa20.98■□□□□ 0.95
CLDND1-221ENST00000510541 ERC2O15083 957 aa20.98■□□□□ 0.95
CLDND1-221ENST00000510541 NBPF12Q5TAG4 269 aaPredicted RBP20.98■□□□□ 0.95
CLDND1-221ENST00000510541 PAG1Q9NWQ8 432 aa20.98■□□□□ 0.95
CLDND1-221ENST00000510541 TAOK2Q9UL54 1235 aa20.98■□□□□ 0.95
CLDND1-221ENST00000510541 FAM155AB1AL88 458 aaPredicted RBP20.97■□□□□ 0.95
CLDND1-221ENST00000510541 SLC10A3P09131 477 aa20.97■□□□□ 0.95
CLDND1-221ENST00000510541 IREB2P48200 963 aaKnown RBP20.97■□□□□ 0.95
CLDND1-221ENST00000510541 DCAF15Q66K64 600 aa20.97■□□□□ 0.95
CLDND1-221ENST00000510541 NOL10Q9BSC4 688 aaKnown RBP20.97■□□□□ 0.95
CLDND1-221ENST00000510541 TMEM39BQ9GZU3 492 aa20.97■□□□□ 0.95
CLDND1-221ENST00000510541 MKRN1Q9UHC7 482 aaKnown RBP20.97■□□□□ 0.95
CLDND1-221ENST00000510541 LAMB1P07942 1786 aa20.97■□□□□ 0.95
CLDND1-221ENST00000510541 MYO5AQ9Y4I1 1855 aaKnown RBP20.96■□□□□ 0.95
CLDND1-221ENST00000510541 SMARCA5O60264 1052 aaPredicted RBP20.96■□□□□ 0.95
CLDND1-221ENST00000510541 TBC1D12O60347 775 aa20.96■□□□□ 0.95
CLDND1-221ENST00000510541 USP2O75604 605 aaPredicted RBP20.96■□□□□ 0.95
CLDND1-221ENST00000510541 GLRX3O76003 335 aaKnown RBP20.96■□□□□ 0.95
CLDND1-221ENST00000510541 MAP2K1Q02750 393 aaPredicted RBP20.96■□□□□ 0.95
CLDND1-221ENST00000510541 PRAMEF18Q5VWM3 479 aa20.96■□□□□ 0.95
CLDND1-221ENST00000510541 ANTXR1Q9H6X2 564 aa20.96■□□□□ 0.95
CLDND1-221ENST00000510541 ZBTB47Q9UFB7 747 aaPredicted RBP20.96■□□□□ 0.95
CLDND1-221ENST00000510541 ZNF112Q9UJU3 913 aa20.96■□□□□ 0.95
CLDND1-221ENST00000510541 PCNTO95613 3336 aa20.95■□□□□ 0.94
CLDND1-221ENST00000510541 IDH1O75874 414 aaKnown RBP20.95■□□□□ 0.94
CLDND1-221ENST00000510541 NFIAQ12857 509 aa20.95■□□□□ 0.94
CLDND1-221ENST00000510541 UBE3CQ15386 1083 aa20.95■□□□□ 0.94
CLDND1-221ENST00000510541 ZSCAN25Q6NSZ9 544 aa20.95■□□□□ 0.94
CLDND1-221ENST00000510541 ANKRD13AQ8IZ07 590 aa20.95■□□□□ 0.94
CLDND1-221ENST00000510541 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.95■□□□□ 0.94
CLDND1-221ENST00000510541 DHX36Q9H2U1 1008 aaKnown RBP20.95■□□□□ 0.94
CLDND1-221ENST00000510541 TCRBV5S4A2TA0A5A2 114 aa20.94■□□□□ 0.94
CLDND1-221ENST00000510541 NUCB1Q02818 461 aa20.94■□□□□ 0.94
CLDND1-221ENST00000510541 METTL16Q86W50 562 aaKnown RBP20.94■□□□□ 0.94
CLDND1-221ENST00000510541 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.94■□□□□ 0.94
CLDND1-221ENST00000510541 BOLA2Q9H3K6 86 aa20.94■□□□□ 0.94
CLDND1-221ENST00000510541 OSBPL3Q9H4L5 887 aa20.94■□□□□ 0.94
CLDND1-221ENST00000510541 SCAF8Q9UPN6 1271 aaKnown RBP20.94■□□□□ 0.94
CLDND1-221ENST00000510541 FOCADQ5VW36 1801 aa20.94■□□□□ 0.94
CLDND1-221ENST00000510541 GOLIM4O00461 696 aa20.93■□□□□ 0.94
CLDND1-221ENST00000510541 CA12O43570 354 aa20.93■□□□□ 0.94
CLDND1-221ENST00000510541 IGHDP01880 384 aa20.93■□□□□ 0.94
CLDND1-221ENST00000510541 ZFYP08048 801 aaPredicted RBP20.93■□□□□ 0.94
CLDND1-221ENST00000510541 ZBTB48P10074 688 aaPredicted RBP20.93■□□□□ 0.94
CLDND1-221ENST00000510541 PDE6AP16499 860 aa20.93■□□□□ 0.94
CLDND1-221ENST00000510541 MX1P20591 662 aa20.93■□□□□ 0.94
CLDND1-221ENST00000510541 CYP7A1P22680 504 aa20.93■□□□□ 0.94
CLDND1-221ENST00000510541 RGS3P49796 1198 aa20.93■□□□□ 0.94
CLDND1-221ENST00000510541 ZNF157P51786 506 aaPredicted RBP20.93■□□□□ 0.94
CLDND1-221ENST00000510541 CACNB3P54284 484 aa20.93■□□□□ 0.94
CLDND1-221ENST00000510541 LRRFIP1Q32MZ4 808 aaKnown RBP20.93■□□□□ 0.94
CLDND1-221ENST00000510541 ANKRD45Q5TZF3 282 aa20.93■□□□□ 0.94
CLDND1-221ENST00000510541 CYP4F22Q6NT55 531 aa20.93■□□□□ 0.94
CLDND1-221ENST00000510541 ADGRA1Q86SQ6 560 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms