RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 LRRC14Q15048 493 aa6.94□□□□□ -1.3
TTC3-220ENST00000487711 MAP3K11Q16584 847 aa6.94□□□□□ -1.3
TTC3-220ENST00000487711 UVSSAQ2YD98 709 aa6.94□□□□□ -1.3
TTC3-220ENST00000487711 UTP4Q969X6 686 aaKnown RBP6.94□□□□□ -1.3
TTC3-220ENST00000487711 ACSBG1Q96GR2 724 aa6.94□□□□□ -1.3
TTC3-220ENST00000487711 FAM46AQ96IP4 442 aaKnown RBP6.94□□□□□ -1.3
TTC3-220ENST00000487711 KRT82Q9NSB4 513 aa6.94□□□□□ -1.3
TTC3-220ENST00000487711 USP31Q70CQ4 1352 aa6.94□□□□□ -1.3
TTC3-220ENST00000487711 AOC2O75106 756 aa6.93□□□□□ -1.3
TTC3-220ENST00000487711 TIAF1O95411 115 aa6.93□□□□□ -1.3
TTC3-220ENST00000487711 ADH5P11766 374 aa6.93□□□□□ -1.3
TTC3-220ENST00000487711 LMNB1P20700 586 aa6.93□□□□□ -1.3
TTC3-220ENST00000487711 SOX4Q06945 474 aaPredicted RBP6.93□□□□□ -1.3
TTC3-220ENST00000487711 TTBK2Q6IQ55 1244 aa6.93□□□□□ -1.3
TTC3-220ENST00000487711 LLGL2Q6P1M3 1020 aa6.93□□□□□ -1.3
TTC3-220ENST00000487711 GRIN3AQ8TCU5 1115 aa6.93□□□□□ -1.3
TTC3-220ENST00000487711 WDR18Q9BV38 432 aa6.93□□□□□ -1.3
TTC3-220ENST00000487711 AP4E1Q9UPM8 1137 aa6.93□□□□□ -1.3
TTC3-220ENST00000487711 DHX15O43143 795 aaKnown RBP6.92□□□□□ -1.3
TTC3-220ENST00000487711 ZNF862O60290 1169 aa6.92□□□□□ -1.3
TTC3-220ENST00000487711 FURINP09958 794 aa6.92□□□□□ -1.3
TTC3-220ENST00000487711 SLFN14P0C7P3 912 aa6.92□□□□□ -1.3
TTC3-220ENST00000487711 ZNF252P-AS1Q0IIN9 211 aa6.92□□□□□ -1.3
TTC3-220ENST00000487711 WDR89Q96FK6 387 aaPredicted RBP6.92□□□□□ -1.3
TTC3-220ENST00000487711 NOC4LQ9BVI4 516 aaKnown RBP6.92□□□□□ -1.3
TTC3-220ENST00000487711 CYP8B1Q9UNU6 501 aa6.92□□□□□ -1.3
TTC3-220ENST00000487711 RLBP1P12271 317 aa6.91□□□□□ -1.3
TTC3-220ENST00000487711 BMP3P12645 472 aa6.91□□□□□ -1.3
TTC3-220ENST00000487711 USP11P51784 963 aa6.91□□□□□ -1.3
TTC3-220ENST00000487711 RSPO4Q2I0M5 234 aaPredicted RBP6.91□□□□□ -1.3
TTC3-220ENST00000487711 RASIP1Q5U651 963 aa6.91□□□□□ -1.3
TTC3-220ENST00000487711 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.91□□□□□ -1.3
TTC3-220ENST00000487711 DYMQ7RTS9 669 aa6.91□□□□□ -1.3
TTC3-220ENST00000487711 ARMC10Q8N2F6 343 aa6.91□□□□□ -1.3
TTC3-220ENST00000487711 GPBAR1Q8TDU6 330 aa6.91□□□□□ -1.3
TTC3-220ENST00000487711 MYRFLQ96LU7 910 aa6.91□□□□□ -1.3
TTC3-220ENST00000487711 KCNF1Q9H3M0 494 aa6.91□□□□□ -1.3
TTC3-220ENST00000487711 TRIM37O94972 964 aa6.9□□□□□ -1.3
TTC3-220ENST00000487711 RXRBP28702 533 aa6.9□□□□□ -1.3
TTC3-220ENST00000487711 LIG3P49916 1009 aa6.9□□□□□ -1.3
TTC3-220ENST00000487711 TSNAXIP1Q2TAA8 658 aa6.9□□□□□ -1.3
TTC3-220ENST00000487711 KIF4BQ2VIQ3 1234 aa6.9□□□□□ -1.3
TTC3-220ENST00000487711 MPRIPQ6WCQ1 1025 aa6.9□□□□□ -1.3
TTC3-220ENST00000487711 FAM20CQ8IXL6 584 aa6.9□□□□□ -1.3
TTC3-220ENST00000487711 TMEM87AQ8NBN3 555 aa6.9□□□□□ -1.3
TTC3-220ENST00000487711 C2CD4AQ8NCU7 369 aaPredicted RBP6.9□□□□□ -1.3
TTC3-220ENST00000487711 H2AFB1P0C5Y9 115 aa6.89□□□□□ -1.31
TTC3-220ENST00000487711 H2AFB2P0C5Z0 115 aa6.89□□□□□ -1.31
TTC3-220ENST00000487711 RPS26P62854 115 aaKnown RBP6.89□□□□□ -1.31
TTC3-220ENST00000487711 ID3Q02535 119 aa6.89□□□□□ -1.31
TTC3-220ENST00000487711 SGO2Q562F6 1265 aa6.89□□□□□ -1.31
TTC3-220ENST00000487711 NKAPLQ5M9Q1 402 aa6.89□□□□□ -1.31
TTC3-220ENST00000487711 PRR23CQ6ZRP0 262 aa6.89□□□□□ -1.31
TTC3-220ENST00000487711 MRRFQ96E11 262 aaKnown RBP6.89□□□□□ -1.31
TTC3-220ENST00000487711 BACH2Q9BYV9 841 aa6.89□□□□□ -1.31
TTC3-220ENST00000487711 PPP1R9AQ9ULJ8 1098 aa6.89□□□□□ -1.31
TTC3-220ENST00000487711 HIF3AQ9Y2N7 669 aa6.89□□□□□ -1.31
TTC3-220ENST00000487711 RAXQ9Y2V3 346 aa6.89□□□□□ -1.31
TTC3-220ENST00000487711 ACTL7BQ9Y614 415 aa6.89□□□□□ -1.31
TTC3-220ENST00000487711 SYNGAP1Q96PV0 1343 aa6.89□□□□□ -1.31
TTC3-220ENST00000487711 F6X3S4 739 aa6.88□□□□□ -1.31
TTC3-220ENST00000487711 TMPRSS2O15393 492 aa6.88□□□□□ -1.31
TTC3-220ENST00000487711 DYRK3O43781 588 aa6.88□□□□□ -1.31
TTC3-220ENST00000487711 RAB6AP20340 208 aa6.88□□□□□ -1.31
TTC3-220ENST00000487711 MAP4P27816 1152 aaKnown RBP6.88□□□□□ -1.31
TTC3-220ENST00000487711 ASPAP45381 313 aa6.88□□□□□ -1.31
TTC3-220ENST00000487711 SCARA3Q6AZY7 606 aa6.88□□□□□ -1.31
TTC3-220ENST00000487711 AGMOQ6ZNB7 445 aa6.88□□□□□ -1.31
TTC3-220ENST00000487711 BEND4Q6ZU67 534 aa6.88□□□□□ -1.31
TTC3-220ENST00000487711 FBLIM1Q8WUP2 373 aa6.88□□□□□ -1.31
TTC3-220ENST00000487711 YIPF2Q9BWQ6 316 aa6.88□□□□□ -1.31
TTC3-220ENST00000487711 SEMA6BQ9H3T3 888 aa6.88□□□□□ -1.31
TTC3-220ENST00000487711 STOML1Q9UBI4 398 aa6.88□□□□□ -1.31
TTC3-220ENST00000487711 PCDHA4Q9UN74 947 aa6.88□□□□□ -1.31
TTC3-220ENST00000487711 TLR6Q9Y2C9 796 aa6.88□□□□□ -1.31
TTC3-220ENST00000487711 GBP2P32456 591 aaPredicted RBP6.87□□□□□ -1.31
TTC3-220ENST00000487711 RELL1Q8IUW5 271 aa6.87□□□□□ -1.31
TTC3-220ENST00000487711 MIR1-1HGQ9H1L0 117 aa6.87□□□□□ -1.31
TTC3-220ENST00000487711 ATXN3LQ9H3M9 355 aa6.87□□□□□ -1.31
TTC3-220ENST00000487711 PIDD1Q9HB75 910 aa6.87□□□□□ -1.31
TTC3-220ENST00000487711 FAM105AQ9NUU6 356 aa6.87□□□□□ -1.31
TTC3-220ENST00000487711 CACNA2D2Q9NY47 1150 aa6.87□□□□□ -1.31
TTC3-220ENST00000487711 CRIM1Q9NZV1 1036 aa6.87□□□□□ -1.31
TTC3-220ENST00000487711 PCDHB5Q9Y5E4 795 aa6.87□□□□□ -1.31
TTC3-220ENST00000487711 UNCXA6NJT0 531 aa6.86□□□□□ -1.31
TTC3-220ENST00000487711 K7ELQ4 463 aaPredicted RBP6.86□□□□□ -1.31
TTC3-220ENST00000487711 TFE3P19532 575 aaPredicted RBP6.86□□□□□ -1.31
TTC3-220ENST00000487711 VAMP1P23763 118 aa6.86□□□□□ -1.31
TTC3-220ENST00000487711 PTPN11Q06124 597 aaPredicted RBP6.86□□□□□ -1.31
TTC3-220ENST00000487711 PWP1Q13610 501 aa6.86□□□□□ -1.31
TTC3-220ENST00000487711 SEPT6Q14141 434 aa6.86□□□□□ -1.31
TTC3-220ENST00000487711 ZC3H12AQ5D1E8 599 aaKnown RBP6.86□□□□□ -1.31
TTC3-220ENST00000487711 CDPF1Q6NVV7 123 aa6.86□□□□□ -1.31
TTC3-220ENST00000487711 HS2ST1Q7LGA3 356 aa6.86□□□□□ -1.31
TTC3-220ENST00000487711 CLEC10AQ8IUN9 316 aa6.86□□□□□ -1.31
TTC3-220ENST00000487711 TRIM42Q8IWZ5 723 aa6.86□□□□□ -1.31
TTC3-220ENST00000487711 PHC3Q8NDX5 983 aa6.86□□□□□ -1.31
TTC3-220ENST00000487711 FANCD2OSQ96PS1 177 aa6.86□□□□□ -1.31
TTC3-220ENST00000487711 RSRP1Q9BUV0 290 aa6.86□□□□□ -1.31
TTC3-220ENST00000487711 C7orf69Q9H7B7 122 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms