RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	PDE1A	P54750	535 aa		6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	RHBDL3	P58872	404 aa		6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	NBPF9	Q3BBW0	867 aa		6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	NAA16	Q6N069	864 aa	Predicted RBP	6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	SAMD7	Q7Z3H4	446 aa		6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	KRT26	Q7Z3Y9	468 aa		6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	ZNF384	Q8TF68	577 aa		6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	EVI5L	Q96CN4	794 aa		6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	PRMT6	Q96LA8	375 aa	Predicted RBP	6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	TBC1D2	Q9BYX2	928 aa		6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	CCDC8	Q9H0W5	538 aa	Predicted RBP	6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	EHD4	Q9H223	541 aa		6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	IL1RAPL2	Q9NP60	686 aa		6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	PAG1	Q9NWQ8	432 aa		6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	TLR7	Q9NYK1	1049 aa	Known RBP	6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	LRP2BP	Q9P2M1	347 aa		6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	TLL2	Q9Y6L7	1015 aa		6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	LAMA4	Q16363	1823 aa		6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	ATAD5	Q96QE3	1844 aa		6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	GREB1L	Q9C091	1923 aa	Predicted RBP	6.17	□□□□□ -1.42
HDAC6-223	ENST00000480525	CEP350	Q5VT06	3117 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	PHIP	Q8WWQ0	1821 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	TCRBV5S4A2T	A0A5A2	114 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	WDHD1	O75717	1129 aa	Predicted RBP	6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	IGHD	P01880	384 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	POTEI	P0CG38	1075 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	POTEJ	P0CG39	1038 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	GNAT2	P19087	354 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	ADD2	P35612	726 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	ZAP70	P43403	619 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	CHAF1A	Q13111	956 aa	Predicted RBP	6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	EAPP	Q56P03	285 aa	Predicted RBP	6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	LDLRAD1	Q5T700	205 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	ANGEL2	Q5VTE6	544 aa	Known RBP	6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	DCAF15	Q66K64	600 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	CDC42EP5	Q6NZY7	148 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	SAPCD2	Q86UD0	394 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	TEPSIN	Q96N21	525 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	NOL10	Q9BSC4	688 aa	Known RBP	6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	DEFB129	Q9H1M3	183 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	SNRK	Q9NRH2	765 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	ZNF70	Q9UC06	446 aa	Predicted RBP	6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	ABCF2	Q9UG63	623 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	MKRN1	Q9UHC7	482 aa	Known RBP	6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	HERC5	Q9UII4	1024 aa	Known RBP	6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	CNTNAP1	P78357	1384 aa		6.16	□□□□□ -1.42
HDAC6-223	ENST00000480525	BAZ2A	Q9UIF9	1905 aa	Known RBP	6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	SSC5D	A1L4H1	1573 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	EPB41L2	O43491	1005 aa	Known RBP	6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	PPP1R12B	O60237	982 aa	Predicted RBP	6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	ZBTB48	P10074	688 aa	Predicted RBP	6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	PC	P11498	1178 aa	Known RBP	6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	PDE6A	P16499	860 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	MAP2K2	P36507	400 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	ECE1	P42892	770 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	BTD	P43251	543 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	GRIK5	Q16478	980 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	NOM1	Q5C9Z4	860 aa	Known RBP	6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	NOL9	Q5SY16	702 aa	Known RBP	6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	SLC9C2	Q5TAH2	1124 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	ANKRD45	Q5TZF3	282 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	CST9	Q5W186	159 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	MAP1S	Q66K74	1059 aa	Predicted RBP	6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	PI16	Q6UXB8	463 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	PLEKHM2	Q8IWE5	1019 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	JMY	Q8N9B5	988 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	ZNF526	Q8TF50	670 aa	Predicted RBP	6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	APPBP2	Q92624	585 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	CCDC102A	Q96A19	550 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	CDCA5	Q96FF9	252 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	RIOK1	Q9BRS2	568 aa	Known RBP	6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	CFHR5	Q9BXR6	569 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	ZCCHC17	Q9NP64	241 aa	Known RBP	6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	ATP8A2	Q9NTI2	1148 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	RAI14	Q9P0K7	980 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	ZNF112	Q9UJU3	913 aa		6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	6.15	□□□□□ -1.42
HDAC6-223	ENST00000480525	RAD50	Q92878	1312 aa		6.15	□□□□□ -1.43
HDAC6-223	ENST00000480525	ROBO3	Q96MS0	1386 aa		6.15	□□□□□ -1.43
HDAC6-223	ENST00000480525	LOC285556	D6RIA3	1793 aa		6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	SHTN1	A0MZ66	631 aa		6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	CA12	O43570	354 aa		6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	IDH1	O75874	414 aa	Known RBP	6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	MFAP1	P55081	439 aa	Known RBP	6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	INHBE	P58166	350 aa		6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	NOG	Q13253	232 aa		6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	RASA3	Q14644	834 aa		6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	DIXDC1	Q155Q3	683 aa		6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	SBK1	Q52WX2	424 aa		6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	BMP2KL	Q5H9B9	411 aa		6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	ARMC9	Q7Z3E5	817 aa		6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	FOXP4	Q8IVH2	680 aa	Predicted RBP	6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	ANKRD13A	Q8IZ07	590 aa		6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	C2orf69	Q8N8R5	385 aa		6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	FBXW7	Q969H0	707 aa		6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	MXD3	Q9BW11	206 aa		6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	OSBPL5	Q9H0X9	879 aa	Predicted RBP	6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	TDRD3	Q9H7E2	651 aa	Known RBP	6.14	□□□□□ -1.43
HDAC6-223	ENST00000480525	GBA2	Q9HCG7	927 aa	Predicted RBP	6.14	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms